Rhipicephalus microplus (southern cattle tick): 119176231
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Entry
119176231 CDS
T07403
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119176231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119176231
03041 Spliceosome [BR:
rmp03041
]
119176231
03036 Chromosome and associated proteins [BR:
rmp03036
]
119176231
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
119176231
Spliceosome [BR:
rmp03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
119176231
Complex B
119176231
Complex C
U2 SnRNP specific factors
119176231
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
119176231
TFTC complex
119176231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
WDR55
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
119176231
NCBI-ProteinID:
XP_037283304
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All DBs
Position
8:complement(77183873..77243588)
Genome browser
AA seq
1214 aa
AA seq
DB search
MHLYNFTLQRATGITHAVHGNFSGTKQQEVAVSRGKTLELLRPDPNTGKVYTLYACEVFG
IIRSMMSFRLTGGTKDYLVVGSDSGRIVILEYNPQKSVFEKVHQETFGKSGCRRIVPGQH
LAMDPKGRALMVAAVEKQKLVYILNRDAAARLTISSPLEAHKSSTLVYHCVGVDVGFENP
VFACLEMDYEEADSDPTGEAANNTHQTLTFYELDLGLNHVVRKYSEPLEEHGNFLISVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSANHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIKLKYFDTIPVATSMCVLKTGFLFVAAEFGNHCLYQ
IARLGEEDEEPEFSSAIPLEEGDTFFFAPRALRNLLPVEELDSLSPAMGCTIADLANEDT
PQLYVACGRGPRSCIRVLRHGLEVSEMAVSELPGNPNAVWTVKRKADEDFDAYIIVSFVN
ATLVLCIGETVEEVTDSGFLGTTPTLSCAQIGDDALVQVYPEGIRHIRADKRVNEWRTPG
KKAIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTDRREMSADIICMSLASVPIGEQ
RSRFLAVGLADNTVRIISLDPSDCLSPLSMQALPATPESLSIVEMGMTEIEAVGQGILYL
NIGLQNGVLLRTVLDQVTGDLSDTRTRYLGSRPVKLFKVRMQGSDAALAMSSRSWLSYYY
QNRFHLTPLSYETLEYASGFSSEQCPEGIVAISTNTLRILALEKLGAVFNQVSTTLEYTP
RKFVVNSDSGHLVIVETDHNAYTEKMKQQRKQQMAEEMVEAAGEGEQELAAEMAAAFLSE
VLPETVFGSPKAGSGMWASVIRVLNPADSQTLCKVALEQNEAALSVALVKFASQPDEQYV
VVGAARELSLQPWHARSGGLLLTYRLSHAGETRLELVHTTSVEEAPTALCPFQGRMLAGV
GKCLRLYDLGRKKLLRKCENKYIPSAIVTIQTMGNRVVVGDVQESFFFLRYKRQENQLVI
FADDALPRWITASCMLDYDTVAGADKFGNVSIIRLPNSLSDEVDEDPTGIKSLWDRGWLG
GSSQKAEVISNFHIGETVLSLQKATLIPGGSESLVYLTVSGTIGVLVPFTAHEDHDFFQH
LEMHMRSENPPLCGRDHLSFRSSYFPVKNVIDGDLCEQFNSLDPSKQKSIAEELDRNPSE
VSKKLEDIRTRYAF
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttacaacttcacactgcaacgcgccacgggcatcacgcatgccgttcacgga
aacttttcgggcactaagcaacaagaggttgccgtgtccagaggcaagactttagaactt
ctccgacctgacccaaacaccggcaaagtttacacactctacgcatgtgaagtgtttggg
attatacgctcaatgatgagctttcgcctcaccggtggaacgaaagattacctggtggtt
ggatctgattctgggagaattgttatcttggagtacaatcctcaaaagagtgtcttcgaa
aaggtacaccaagagacatttgggaaaagtggctgccggcgcattgtgcctggccaacat
cttgccatggaccccaagggcagagcacttatggtggcagctgttgaaaagcagaagctg
gtgtatatcttgaacagggacgcagctgcacggttaaccatttcctcaccgctggaagct
cacaaatcaagcactctagtgtatcattgtgttggggtggatgttggatttgagaaccca
gtatttgcctgccttgaaatggactacgaggaggccgattctgacccaactggtgaagca
gctaacaacactcaccagacgttaactttctatgagctagacttgggcttgaaccacgtc
gttcgtaaatacagtgagccactagaagaacatgggaacttccttatatcagttcctgga
ggcagtgatgggcccagtggtgtactcatttgttctgagaactacatcacctacaagaac
tttggagatcaacctgacattcgttgtccgatccccaggaggaggaatgacttggatgat
ccagaacggggcatgatatttgtttgcagtgcaaatcacaaaacaaagtccatgtttttc
tttctggcacaaacagagcaaggagatatcttcaagataacattggaaacggatgaagac
atggtcactgaaatcaagctgaaatacttcgacacgattcctgtggcaaccagtatgtgc
gtgttgaaaactggattcttatttgttgcggctgaatttggaaaccactgcctctaccaa
attgcgagacttggagaagaggatgaagaaccagagttcagcagtgctattcctcttgag
gaaggagacacattcttttttgctccccgtgccttgcgcaacttgctacctgtggaagaa
ttggactccctgtccccagccatgggctgcactattgctgatctagccaatgaggacacg
cctcagttgtatgtggcttgtggtcgaggaccccgttcctgtatacgcgtgctccgccac
ggtcttgaggtctcggaaatggctgtgtccgaacttcctggcaatcccaatgctgtatgg
actgttaaaaggaaagcagatgaggactttgatgcgtacataattgtgtccttcgtcaat
gctacccttgtgctctgcattggtgagactgtagaagaagtcaccgattctggtttcttg
ggaacaacacctacgctctcatgtgcccaaattggagatgacgcattggtgcaggtgtac
ccagaaggaattcgacacattcgggctgacaagcgtgtcaatgagtggcgtacaccagga
aaaaaagctattgtaaagtgtgctgtcaatcaacgtcaagtcgttattgctctcacggga
ggggagctcgtctactttgagatggatccgactggacaactcaatgagtacactgaccgt
agggaaatgtcggctgacatcatctgcatgtcactggccagtgtgccaatcggagagcaa
cgttcacggtttttggctgttggtctggcagacaacactgttcggattatttcgctggat
ccatctgactgcctatctccattgagtatgcaagctctgcctgcgacacccgagtcacta
tccattgttgaaatgggtatgacagaaattgaagcagttggccaaggaatcctttacctc
aacattggcttgcagaatggtgtgttgctacgtactgttttggatcaagtcacaggagac
ctttcagatacacggactcgttatttaggctccaggcctgtcaagctcttcaaagttcgc
atgcaaggaagcgatgcggctctggcaatgtcaagtcgctcatggttaagttactactac
cagaaccgatttcatttgactccactgtcatatgaaacactagagtatgcatctggattt
tcatctgagcagtgtcctgaaggcattgttgcaatttctacaaatacgctcagaattcta
gccctggagaagcttggggctgtgttcaaccaggtgtcaaccacgttggaatacactccc
cgcaaatttgttgtgaacagcgacagtggccatttggtcattgttgaaacagaccataat
gcttacacagagaagatgaagcagcagcgtaagcagcagatggcagaggaaatggtggaa
gcagctggtgaaggagagcaggagcttgctgcagagatggctgccgcctttctgagtgaa
gtgttgcccgagacggtatttggttctccaaaggctggctctggcatgtgggcatctgta
ataagagtcctgaaccccgctgacagccagacactttgcaaggtagccttggagcagaac
gaggcagcactcagtgtggcgctggtcaagtttgcatctcaaccagatgagcaatatgtt
gtagtgggtgctgccagggagctgtccttacagccttggcacgcacgtagtggtggactt
ttgctgacttaccgactgagccatgctggtgagacgcgcctggagcttgtgcacaccaca
tctgttgaggaagcgccgacagccctgtgccctttccagggccgcatgctggctggggtg
ggcaagtgcctacgcttgtatgacttgggacgcaagaaactgctccgaaagtgtgaaaac
aagtacatccctagtgccatagtaacaatacagaccatgggaaaccgcgtagttgtagga
gatgtccaggagagcttcttttttcttcgctacaaacgccaagaaaatcaattggtcatc
tttgcggatgatgcattacctcgctggatcactgcatcctgtatgcttgactacgacaca
gttgctggtgctgacaagtttgggaatgtttccattatacgtctgccaaacagcttaagt
gatgaagtggatgaagatcctacaggaatcaaatcactttgggaccgtggctggctagga
ggctcatctcaaaaggctgaagtcatatccaactttcatattggagaaactgtactgtca
ctgcagaaagcaacattaatccctggtggctcggaatcacttgtgtacttgacagtgtca
ggcaccattggagttctagtgccatttacagcacacgaggaccacgatttctttcaacat
ttggagatgcacatgcggtctgaaaacccgccattgtgtggcagagaccatctttcgttt
agatcatcttactttcctgtcaagaatgtcattgacggtgacctgtgtgaacagttcaac
tcacttgatccgtctaaacaaaagagcattgcagaggagctcgacaggaatccaagcgaa
gtttccaagaaactggaagacatcaggacaagatatgcattttga
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integrated database retrieval system
