Rhipicephalus microplus (southern cattle tick): 119176245
Help
Entry
119176245 CDS
T07403
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119176245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119176245
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119176245
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
119176245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF2706
Motif
Other DBs
NCBI-GeneID:
119176245
NCBI-ProteinID:
XP_037283326
UniProt:
A0A6M2CP02
LinkDB
All DBs
Position
8:complement(81206865..81244693)
Genome browser
AA seq
289 aa
AA seq
DB search
MPHILISEAEKIYIIHGIQENLRCDGRSCLEYRFLELETGLVSNCSGSSHVRLANTDILV
GIKAELDAPDPSAPHQGRIEFFVDCTANANPVFEGRGGEQIATEIRSALARTYSSPKCLD
LKSLAVVPGQQAWVLYVDVLILECGGSLIDAVSVAVKAALYDLKIPKVSVNIDENGEPEI
EVSDDPYDVNKMSIANVPCFITLSKIGQQFVLDATQEEEACAVGSLTMAVTATGKIASLI
KGSTGSLHPENIMDIIEVGRDVGIALNTAVSQQLKLESSSKREKKGFLS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatatactcataagtgaagcagagaaaatctacattatccatgggatacaagaa
aacttacgctgcgacggtcgcagttgtctggagtatcgattcctggaactagaaaccggc
ctagtgtccaactgcagtggatcttcacatgtcagactggcaaacactgacatcttagta
ggaatcaaggcagaacttgatgcacctgatccctctgctccacatcaaggccgcattgag
ttctttgtggattgcactgccaatgctaaccctgtgtttgaaggaagaggaggagaacag
attgctactgaaattagatcagccttggctcgtacttacagctcccccaaatgccttgat
ctgaaatctttggcagttgttcctggtcaacaggcatgggtcctttatgtggatgttttg
atcttagaatgtggtggaagtctgattgatgctgtttctgttgcagtcaaggcagcattg
tatgacttaaaaattccaaaggtttcagtgaacatagatgaaaatggagaaccggaaatt
gaagtttctgatgacccatatgatgtcaacaaaatgagcattgcaaatgtgccttgcttt
attacgctttcaaagattggtcaacagtttgtgttagatgcaacacaagaagaagaagcc
tgcgcagtgggctcattaacaatggctgtcacagcaactgggaaaatagcgagcctcatc
aaaggtagtactgggagccttcatcctgaaaacattatggacatcattgaggttggaaga
gatgttggaatagctctcaacactgcagtgtctcaacagttgaagcttgaaagcagttct
aaaagggaaaaaaagggttttctttcatag
DBGET
integrated database retrieval system
