Rhipicephalus microplus (southern cattle tick): 119176290
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Entry
119176290 CDS
T07403
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
119176290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119176290
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119176290
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119176290
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
119176290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
119176290
NCBI-ProteinID:
XP_037283395
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All DBs
Position
8:89133626..89134960
Genome browser
AA seq
283 aa
AA seq
DB search
MEEIVAKVGNVVFELEVALEQQLGALPLPFPGMDKSGAAVCCFYVQGNCSKASACPFRHV
KGDRTVVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYFYSRFNACSNKECPFLHIDPEAK
IKDCPWYDRGFCRHGPVCRHRHTRRVMCVNYLCGFCPDGPECKFMHPKFDLPIQDPAQQA
KKANIVCHYCGEAGHKAISCHKMPPEVREEQQHSRMQFHNHYGGMHRRDHDDSGGPSPGG
QRGFRPLDQVTCYKCGEKGHYANKCPKGHLAFLSSALQNTPSV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatagtagccaaagtaggaaatgtcgtgttcgagctggaagtggccctggag
cagcaactgggcgcactgccgctaccgttccctggtatggacaagtccggagcagccgtg
tgctgcttttacgtgcagggaaactgcagcaaggcgtctgcgtgccctttcaggcacgtt
aagggtgacagaacagtggtctgtaagcactggctgcgaggtctctgcaagaaaggcgac
cagtgcgagtttctccacgagtttgacatgacgaaaatgccggagtgttacttctattca
cgtttcaacgcgtgcagtaacaaggagtgcccgttcctacacatcgatcccgaagcgaaa
atcaaagattgtccctggtacgaccgcggcttttgtcgacacggcccagtctgtcgccac
cggcacacccggcgcgtcatgtgcgtcaactacctttgcggattttgtcctgacgggccg
gagtgcaaattcatgcatcccaagtttgacttgcccattcaggacccggcgcagcaagcg
aaaaaggccaacattgtgtgccattactgtggtgaggcagggcacaaagcaatatcctgc
cacaaaatgccgcctgaagtgcgagaggagcagcagcactctcgcatgcagttccacaac
cactacggaggaatgcaccgacgggatcacgacgacagtggaggccctagcccgggagga
caacggggcttcagaccgctggatcaagtcacttgctacaagtgtggagagaaaggacat
tatgccaataaatgcccgaagggacatttagcattcctcagcagtgcccttcagaacacg
ccgagtgtgtaa
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