Rhipicephalus microplus (southern cattle tick): 119176297
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Entry
119176297 CDS
T07403
Symbol
CTCF
Name
(RefSeq) CTCF
KO
K23195
transcriptional repressor CTCF
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119176297 (CTCF)
03036 Chromosome and associated proteins [BR:
rmp03036
]
119176297 (CTCF)
Transcription factors [BR:
rmp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119176297 (CTCF)
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119176297 (CTCF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_jaz
zf-H2C2_5
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-met
Teflon_C
zf-C2H2_7th_ZNF462
AT_hook
zf-C2H2_11
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
119176297
NCBI-ProteinID:
XP_037283404
LinkDB
All DBs
Position
X:101127420..101195671
Genome browser
AA seq
874 aa
AA seq
DB search
MSDQTDPPSGGTSSIPEPASAGDSEAISDIQNYLASFNKEIQGDGASAAAVTAVDAVITS
AETDTADAEPSVTTADGTTTFYVTQTADGFQYATSSQPQFDGTTTYYTPTQAFYTTDADP
AANGTATVTAAGQLEAIQGYATTADGKTFPTTTTTSDGLQQIVLAVGKGQGAEAREIAVA
IPDTIDQVRRETAEDLLKAVEQQGRSAADGVQPSDQPTFVAMQSGTGHDGSDEQQVILNT
GNSYQTVTIVPSDTNPGEVSYVLIVSQPDEGKEDLAKADMDMSVYDFHEGGDKTGAEVVA
EEASTPEPAAKMRTIKIGPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCS
VCERGFKTLASLQNHVNTHTGTRPHQCKECDAAFTTSGELVRHVRYRHTHEKPHRCTECD
YASVELSKLKRHMRCHTGERPYQCPHCTYASPDTYKLKRHLRIHTGEKPYECDVCHARFT
QSNSLKAHKLIHSGNKPIFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDR
YTYKVHVKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPFRCDECDQAFRQKQLLK
RHKNLYHDPNYVPPIPKEKTHECPECTKAFRHKGNLIRHLAIHDPEATAAERAEAMRIGE
PKGPGEEPDGEEDDYMMEDEEDEEMDDMGMEEGMVNEGQQVVVFEVIQIPAADGVTMEQH
AIRAVPEDALRVTSNGGVLTSADGQELTIIQQVPQDQSVVTEVVNKSALLPLKRPRGRPR
KYATMEAAASNQGEEMLGMNKGELDAPQREAEMARRRLEQKQKDMEECFGFNDEEDETIL
AMPAAPGVNGPSEEKVEDGTTTTYILMQENGDAV
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccagacagatccaccatctggtgggacctccagcattcctgaaccagctagt
gcaggtgactctgaagccatctctgacattcagaattacttggcatcattcaacaaagag
attcaaggcgatggagcttctgctgcggcagtcactgctgtcgatgccgttatcactagt
gcagagactgacaccgctgacgctgagccctcagtcacaacagctgacggcaccactact
ttttacgtgacccagactgctgatggctttcagtatgcaacatcgagtcagcctcagttt
gatggcaccactacgtactacacaccaacccaagctttctacaccactgatgctgaccca
gcagcaaatggcactgctactgtaactgccgctggtcagctggaagctattcaaggttat
gccacaactgctgatggcaagacctttccaaccacaaccaccacgagtgatggtctccaa
cagatagtgctagctgtcggcaagggccaaggagcagaggcacgagaaatcgctgttgcc
attccagacactattgatcaagtgcggcgtgaaacagcagaagatctgttgaaagccgtt
gagcaacaaggaaggtctgcagcagatggagtgcagccatcagatcagccaacatttgtt
gccatgcagtctggtactggtcatgatgggagtgacgagcagcaggtgatccttaacaca
ggcaactcctatcaaactgttacaattgtgccatcagacacaaatccaggagaggtcagc
tatgtgctcattgtgtcccagccagatgaaggcaaagaggatctggccaaagccgacatg
gacatgtctgtgtatgatttccatgaaggaggagacaagactggggctgaagtagtggca
gaggaagcttctacaccggagcctgctgctaaaatgcgtaccatcaagattggaccgaaa
aagagccagacggtgacacaagcgcacatgtgcaactactgcaactacacaagtccaaag
cggtacttactgtctcggcacatgaagagccattcggaagaacgacctcacaagtgttca
gtgtgtgagcggggtttcaagacattagcatcactgcaaaatcacgtcaacacgcataca
ggcacacgcccccaccaatgtaaagaatgtgatgcggcctttactacttctggagagttg
gttcgtcatgtgagataccgacacacccatgaaaagccacaccgctgcaccgagtgtgac
tacgcctcagtggagctaagcaagttaaaaaggcacatgcgctgtcacacgggtgagcgg
ccataccagtgcccacactgcacgtatgcctcgcctgacacgtacaaactcaaacggcat
ctgcgaatccatacgggggagaagccgtacgagtgcgatgtgtgccatgctcgtttcacc
caatcaaacagcctaaaagcccacaagctcattcactccggcaacaagcccatcttccag
tgtgagctgtgcccgactacttgcggtcgcaagacagaccttaggatccatgttcaaaag
ctgcataccagtgacaagccgctgaaatgcaagcggtgtggcaaatccttcccagatcgc
tacacatacaaggtgcatgtcaagagccatgaaggagagaaatgcttcaagtgtgacctg
tgtccatatgcatccatctcgcaacgtcatcttgagtctcatatgctgattcatacggac
caaaagccattccgttgtgatgaatgcgaccaggcttttcgacagaagcagcttctgaag
aggcacaagaatctttaccacgaccccaactatgtgcctcctataccgaaggagaagaca
cacgagtgtcctgagtgcaccaaggccttcaggcacaagggtaatctgatccggcactta
gccatccatgacccagaagcaacagcagctgaacgggctgaagcaatgcgcatcggtgag
cctaaaggtccaggtgaagagccggatggagaggaggatgactacatgatggaggacgag
gaagatgaagaaatggacgatatgggcatggaggagggcatggtcaacgaaggccaacag
gtggttgtatttgaagtgatccagatccctgcagcagatggtgtaactatggagcagcat
gcaataagagcagtccctgaagatgcgctgcgcgtgacaagcaatggtggcgtcctcact
agtgctgatggccaagagctcactatcattcagcaagttcctcaggatcagtctgtagtt
accgaggtggtgaacaaatctgcacttctaccattgaaacgaccacgtggacggccaaga
aagtacgccactatggaggcagctgcaagcaatcagggtgaggagatgctaggcatgaac
aagggagaactggatgcaccacagagagaagctgagatggcacggagacggcttgaacag
aagcagaaagacatggaggagtgctttggtttcaatgatgaagaagacgagacaatactg
gcgatgccagctgcaccaggggtgaatggaccaagtgaagagaaggttgaagatggcact
acgaccacctatatattgatgcaggaaaatggtgacgctgtttag
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