Rhipicephalus microplus (southern cattle tick): 119176836
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Entry
119176836 CDS
T07403
Name
(RefSeq) dynein regulatory complex subunit 6-like
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmp04121
]
119176836
Ubiquitin system [BR:
rmp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119176836
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_EndoS
LRR_Zer-1
F-box_5
Adeno_E4_34
Motif
Other DBs
NCBI-GeneID:
119176836
NCBI-ProteinID:
XP_037284084
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Position
8:107180821..107203595
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AA seq
775 aa
AA seq
DB search
MTPGKDDERRIARARAMARKLEENPRVMYMDASLRKHSDHAAVVVTSIDRLIISASLRTK
DPAIAEEAAVALTLVAGNIIADYHAREISIRAEPEQEELPNPVTSFQDITQMYGEGRSTL
LLHVVLHHRCDAPERAPLLALPKAAAPCRKRPFLPPWAASRDGAGRRKPSLSPEIVLNVD
QVLGFDNTGPTTGTMAYNEDAGLCGSLPTEILCRIFSYLDVSDRLAAGMTCKTWYTSAVD
SRIYKDTVVTLEKNVKERMLVLLHSNSIVTRLVIKNCALDTDAEFWQKVGHTLKSLELIH
CSICWTDFVSVLEKCRRLVHLAVIHCDKLESIGEPGIADHAPHNFFLRETSGIISVDLSN
TYLTDAVFHEIMTVTGKVRALSLEGCRLSVHDAVHRRFYPPGQVHSPLVFTLQEVLKTIE
NAPIQVLNLSRTIIDNRCIAKLSATFSKTLREFHAASCVLSGVQGVTALCTNTPKLTCLN
LGSNPLLGDDCLEIVCESLRALEQLDMSNCTVSSMGFANLVHLKKLQCADFSNCILSEEG
TVVRFLSSRPWPDIQALNISSCRIAANVVKCLSEHMPTLVSLDVSHTMLLTDEAVRAIWT
HLRLLRVLRMGRCPSLTNAALHHPSNMKSGLPTSMASLGGLKELCLGGCSLISDAGVLAA
MFFRELAFLDLGHCPLLTSASLKHIALHCPSLSKLVLRCCVQLDDDSLTPVLRPSSRLRQ
LDIGGCRYVTDGTLLRVAQCPSLKYVNVTSCMVTQDAVQHLQLERPDLEVDHSVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgggcaaggacgacgagaggcgcatcgcgagggccagagccatggcccggaag
ctcgaagagaaccccagggtcatgtacatggacgcctcactccgaaaacacagtgaccat
gctgcggtagtggttacctccattgacaggctaatcatcagcgcatctctgaggacaaag
gaccctgcaattgccgaggaagcggctgtggcactcacactcgtagcaggcaacatcatt
gccgactatcatgcccgagaaatatcaatccgggccgagcctgagcaggaagagctacca
aacccggttaccagctttcaggacattacccagatgtacggagagggaaggagcaccctt
ttgctccacgtcgttctacaccatcgctgtgacgcaccagagagggctcccctgctcgcc
ctgccgaaagcggctgcgccctgccgaaagcggccttttctacctccgtgggctgcatcg
agggacggcgccgggcgacgtaagccgtccttgtcccctgagattgtccttaacgtggat
caagtgcttggctttgacaacacgggcccaaccactggcaccatggcctacaacgaagat
gcaggactatgcggatcactccccacagagatcctgtgccgcatcttctcatacctggat
gtttccgacaggctagcagcgggaatgacgtgtaaaacgtggtacacgtcagccgtcgac
agccgaatatacaaagacacagtagtcacgctggagaaaaatgtcaaagagaggatgcta
gtgcttttgcactccaactcaatcgtgactcgcttggttatcaagaactgtgcgctagac
acggatgccgagttttggcagaaagtagggcatacgctcaagagcctggaattgatacat
tgctcgatctgctggacagacttcgtttcggtacttgagaaatgtcgaaggctggtacac
ctagcagtcattcattgtgacaaactggagtcaattggcgagcccggcattgctgaccac
gctccgcataatttttttttgcgtgagacgtccggcatcatttcagtagatctttcaaat
acttacctcacagatgcggttttccacgaaataatgactgtgacaggaaaagtgcgcgcc
ctgtcattggaaggctgccggctcagcgtgcacgacgcggtgcaccgacgtttttacccg
cctgggcaagtgcacagcccactagtgttcaccctgcaagaagtgttgaaaacaatagaa
aacgcaccaattcaagtactgaacctgagccgaaccataatcgacaatagatgtatcgct
aagctttctgccaccttttcgaagactctgcgagagttccacgcagcttcctgtgtcctg
tcaggagtgcagggcgtgacagctttatgcaccaatacacccaagctgacgtgcttgaat
ctcggatccaacccactgcttggtgacgactgtctggaaatcgtgtgcgaaagtcttagg
gcacttgaacaactggacatgtccaattgcactgtaagttccatgggattcgctaactta
gtgcacctaaagaaacttcagtgcgccgatttctcaaattgtattctcagtgaagaagga
actgtggtgcggttcctttcctccaggccatggccagacatacaagctttgaacatcagc
tcttgcagaatagcagcaaacgtggtaaagtgcctgagtgagcatatgccgacactcgta
tcccttgacgtgtcccacacgatgctacttactgatgaggcagtgcgagctatctggacc
cacctgcgcctcctcagagtgctgcgtatgggacgttgtccaagtctcactaacgccgcc
ttgcaccatccaagcaacatgaaatcgggcctgcccacctccatggctagcctcggcggt
ctcaaagagctatgccttggaggctgctccctcatttccgacgcaggcgtgctggccgca
atgttctttcgtgaactggcgtttctggacctcgggcactgcccccttctcacgtctgcg
tcgctgaaacacattgccttgcactgccccagcctgtcgaagttagttctgcgctgctgc
gtgcagttggatgatgactcgctgacaccggtcctcaggccttcatcgaggctaaggcaa
ctcgacataggaggatgcagatacgtcaccgacggaacacttcttcgtgtagcacagtgc
ccgtcgctgaagtacgtgaacgttacatcgtgcatggtgactcaagatgcagtacaacac
ctacaactggagcgaccagatcttgaagtggatcactctgtggaatga
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