Rhipicephalus microplus (southern cattle tick): 119177962
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Entry
119177962 CDS
T07403
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119177962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119177962
03036 Chromosome and associated proteins [BR:
rmp03036
]
119177962
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119177962
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119177962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
GatZ_KbaZ-like
DUF5023
Motif
Other DBs
NCBI-GeneID:
119177962
NCBI-ProteinID:
XP_037285043
LinkDB
All DBs
Position
1:complement(190568228..190836572)
Genome browser
AA seq
1875 aa
AA seq
DB search
MFGNQNPFGTTTGFGTGGTFGSTQPTAFGQTGSAFGTSAFGATTTPSTGGGLFGGTTTQT
GSLFGSTGSSFGQPSTSTTPGFGFGAPATGSSMFGTMNQQPAASTGIFGASSSSFGQPRP
QFGSSFSTTTPATGTSLFGQPQSTGLFGQTAGSSLFGSTAFGTGSVTTGTTIKFKPPTGT
DTMMKNGVSSTISTSHQCITCMKEYENKSLEELRLEDYAANRKGGGQAGMVGFGATTQSS
SIFSTPATQQSTFNFGATQNKPLFGTSTTGSFAPTGGSLFGQATTQSQNVFGKPTGFGMT
TPASTSAFGTSTAFGTTGTSVFGQPQQKSLFGQPAGTTLFGSTTATTQPSTGFGTGFGTT
FGATTQPSAFGVRPTFGAATTSAPSGFGFGSTANTGTSLFGAKQPSQFSFGATTPAFGAT
NTTGFGTSTGSLFGATKTTPSFGTGSTPAFGSTGFGSTPAFGTAGTNTTGGLFGSTTAAK
PTGFNFGGTTTTTPFTGFGQTGVGTGSTFGSTVPTMGSTDPNAAANQLQQQQTQQLLQYL
STNPYGDNPLFRNVLKETNKREELLKPTNPAAQQALLASHYKVSPVPAPKLRPKPVGAQA
GKTSSLFEGLEDEEDIIEPFTPRQSVKTLIIKPKDTPDKLSASTLLASPPLATNRSSTPI
TQSSSSPSSRTPLAVPAKDSGLVDGASVYLASSEPSFTAPTVQVEKPVSNLQSLDDAVSS
LEVRGRKLRFMSSSESLDDSSQADPAPDPAKPPHPAGIVLTRPGYFTVPSMDELASMVGP
DGHCIVENFCVAREGYGNVYFSGRMDVARLNLDEIVHFRRMEITVYPDDDEKPPVGEGLN
RKAQVTLDKVWPINKVTRESITDPEKLKALGYQEKLERTTAKIGGRFLEYRPETGSWVFE
VKHFSKYGLDESDNEVDEAATQTATSAKLPQQAAATKPADGAVDKITQKPPSAPGSSATF
MACRESDTAAGYRSDDDDMEDMEPSSAGTADRPGSDDALSPGADAASYRPVTQQLAEALG
LSPDAVQSMKESFFGREDEDDDDHELAITHPRLQRALVSGGSYQSPIHFDRTRSLSSTPT
QSRAASRCRAAAAAYSQPNVSQAFSEFLPSHVLSGAAPLPGDASQCPTGIVRTAHSDVLT
SAFSSPGCVPAAEQMLRNRTLAEPMVIPIDVEPVPLAQSLSYECQHMLADAACVAGYRAR
CGWGPRWTLTHVGKALNRILDDEPMETAGHVGIFAGQRYPKPSPSFSISVERVAVDLHTL
RPDDIQKKNVVAMLEIQLVHSCCSLEGGSPIFAPNPSVDCLHDQDALVARLATEMGPGHA
DAAMMRQFHTILGLCVALWGRAPGCDPESDDVTRYSYAKRRKEALSDWLVDTTKSIIEAE
ITDHQRKEDSELLVMLSYLSGRDMSKACAVAQRSRDYRLCLLLAQNGSNPVSRHMLQKQL
DHWKKFKQDRYINPERLRVYALLAGLMVWPTSDPDETINCCADLDWKRALALHLWYYCAP
TCNISDAVAAYEAAFEDSGRGHCGPTARPPYPPCHKDDVGEEPYVLDPEAPLDTCFLLLK
LYCDQSQRLDRLLAPVSSVSSQLDFRISWLLHKLLQSFGFGHLSATAAETLHTSFAAQLE
SWGLWPWAVFALLHLEDATGRQKAVTELLVRHASGSLRGSDPETGLTEDETFVCDKLTVP
PAWVYHAKAIRASTEGNFKDKAIFLLKGGIWNEAHETIVRHLATEAVIDDKLGELAELLQ
PLIEHSDQIQNWSTGGKVFHDFLCVCNTMKKATEGDLGTYDLEAIRPAVLSLCGSISSLV
CRTTRDRLCQTEIAKKTAMVLQLITSADSGAPDSAMHAACHNIELLSMPEDYSIEDFELL
ARTCTENAILCDLAS
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtaaccagaaccctttcgggaccaccacgggatttggcacagggggaaccttc
ggctcgacgcagccaacggcattcggtcaaacgggcagtgcgtttggaacctctgccttt
ggtgccacaacgacacccagcacaggtggtggcctctttggaggcacaacaacacagact
gggagcctctttggaagcacaggatccagttttggccagccttccacgtctacgacgcca
ggctttggtttcggagcacctgcaactggctcgtccatgtttggaacgatgaaccagcag
ccggcagcgagcacgggaatctttggcgcctcttcctcctcattcgggcagccccgaccg
cagtttggcagctccttctccaccactacgcctgccactggcactagcctctttggccaa
cctcaaagcacaggcctgtttggccaaactgctggaagttctctttttggatcaacagcg
tttggcactggctctgtgaccacaggcaccacaataaagttcaagccaccaacgggcact
gacacaatgatgaagaatggcgtctccagcaccatcagcacatctcaccagtgcatcaca
tgcatgaaggagtacgagaacaagagcttagaggagctgcgcctggaggattatgctgcc
aacagaaaaggtggtggccaggcgggcatggtaggtttcggggcaaccactcaatcgagc
tccatcttcagcactcctgccactcagcagtcaacgttcaattttggtgccacccaaaac
aagccgctcttcggcacttccactactggtagttttgcacctactggtggctcactattt
gggcaggcaacaacgcagagtcaaaatgtgtttggtaagccaactggctttggtatgaca
acaccagcctccacctctgcttttggaaccagcactgcattcgggaccactggaacctct
gtgtttggtcagccacagcaaaagtccctgtttggccagccagcaggcacaacactcttt
gggagcacaactgctacaacacagccttccacaggattcggcacaggttttggcactacg
tttggtgctacaacgcagccgagtgctttcggtgtaaggccaacatttggtgcagccacc
acatctgcaccttccggctttggatttggcagcacagccaacacagggacatcattgttt
ggggccaagcagccatcgcagttttcctttggggcaaccacgccagcgtttggggcaacc
aacacaacaggctttggaacatcgactggcagcctctttggtgcaaccaagacgacgcca
tcctttggcactggcagcactcctgcgtttggcagcacgggctttggcagcactcctgca
tttggcacagctggaacaaatactacagggggactgtttggttcaaccactgcggcaaag
cccacaggcttcaactttggaggcacgactactactacacctttcacaggcttcggccaa
acaggtgttgggactggttctacttttggcagtactgtaccaaccatgggaagcacggat
ccaaatgcagcagcgaaccagctgcagcagcagcaaacacagcagctgctccaatacctg
tcaaccaatccgtatggagacaacccactgttcaggaatgtgctcaaggagaccaacaaa
cgtgaagagttgctgaagcccaccaatccagcagcgcagcaggcgttgctcgcctctcac
tacaaagtgtcccccgtgccagcacccaagttacggccaaaaccggttggagcacaggca
ggcaagacatcatcactttttgaagggctagaagatgaagaagacatcattgagccattt
actcctcgccaaagtgtcaagacactgataatcaaaccaaaggacactccggacaagctt
agtgccagcactctcttagcttccccaccacttgcaaccaaccgttcgtccacaccgatc
actcagtcatccagtagtccatcctctaggactccgttggctgttcctgctaaggacagt
ggtcttgtggacggcgcgagtgtctacctggccagcagtgagcctagcttcacagcacca
acagtgcaggttgaaaaacctgtaagcaatctgcaaagcttggatgatgcagtgtcatcc
cttgaggttcgtggccgcaagttgcgcttcatgtccagctcggaatccctggacgactct
tctcaggctgatccagcacctgaccctgcgaaacccccccatcctgcaggcattgtgctc
actcggccagggtacttcaccgttccttctatggacgagttagcatctatggtgggccct
gacgggcactgcatcgtggaaaatttttgtgtggcacgggagggctatggcaatgtctac
ttttctggccgcatggacgttgcacgactcaaccttgatgaaattgtgcactttcgtcgc
atggagatcacagtgtaccctgatgatgacgaaaagccacctgtgggcgaaggcctgaac
cgtaaagcacaggttactctcgacaaagtgtggccaatcaacaaagtcactcgagaatca
atcacagatccggagaagctcaaggcacttggttatcaagaaaaattggagaggaccact
gccaaaattgggggtcgttttctggagtacaggccggagacaggttcttgggttttcgag
gtgaagcacttttccaaatatggtttggacgaatctgacaacgaagttgatgaggccgct
acccagacagctacgtcagcaaagttgccacagcaagcagctgccacaaaacctgctgat
ggtgctgtagacaaaatcactcagaaacctccatcggcgcctggatcctctgctactttc
atggcctgccgagaatctgacactgcagcgggatatcgttctgatgatgatgatatggag
gacatggagccgtcatctgctggaacagcagacaggcctggcagtgatgacgcactatca
cctggggctgatgctgcaagctacaggccagtgactcagcagctagcagaagcacttggc
ctgagtccagacgcagtgcagagcatgaaggagtccttcttcggccgagaagatgaggac
gatgatgatcacgagctagccatcactcatccacgccttcagagagctctggtgagcggt
ggttcctaccagagccccattcacttcgatcgtaccagatcgttgtcgtccacgcccaca
caatccagagcagcatcccgttgtcgtgctgctgcggctgcctattcccaaccaaatgtg
agccaggccttctcagagttcctcccttctcacgtcctttctggtgccgctccactgcca
ggagatgcaagccagtgccccacaggcattgtgagaacagctcacagtgacgtcctcaca
tctgcgttcagcagtccaggctgtgtgccagctgctgagcagatgcttcggaatcgcaca
cttgcagagcccatggtgattcccatcgacgtggaacctgtgcccctggctcaatctttg
tcctacgagtgccagcatatgctggcggatgccgcttgcgtggctggctatcgtgctcgg
tgtggctggggaccacgttggacgctgactcacgtgggcaaagcattaaacagaattctc
gatgatgaacccatggagacggcagggcacgtgggcatttttgcgggacagcgctatccg
aagccatccccttcattttccatctccgtggaaagagtggctgttgacttgcacacattg
agaccagatgatattcaaaagaaaaacgtggtagccatgttggaaatccaactggtacat
tcgtgctgttcactggaagggggcagccctatctttgcaccgaaccctagtgtggactgc
ttgcatgaccaggatgcccttgttgcaaggcttgcaactgaaatgggtcctggtcatgcc
gacgctgccatgatgcggcagtttcacaccattcttggtctctgtgttgccctgtggggt
cgcgcacctggttgcgaccctgaaagtgacgacgtcaccaggtactcctatgcaaagcgt
cgcaaggaggcactctcagactggcttgtggatactacgaaatctatcattgaagctgaa
ataacagaccatcagagaaaagaggacagcgaactgctggtgatgctgagctatctgagt
ggtcgtgacatgtccaaggcgtgtgcagtggctcaacggtctcgagactaccgtttgtgt
ctgttgctggctcaaaatggttccaacccagtcagccgccacatgctgcagaaacaactg
gaccactggaagaagttcaagcaagatcgatacatcaatccagaacgactccgggtctat
gccctattggctggactgatggtttggccaacttcagacccagatgaaacaattaactgc
tgtgctgacctcgactggaaaagggctctggcactacatctttggtactactgtgctcca
acatgcaatatcagcgatgctgtggctgcatatgaagctgcgtttgaggactctggacgc
ggacactgcggccctactgcgcggcccccatacccgccttgtcataaagatgatgtaggt
gaggagccgtatgtgttggaccctgaagcaccgttggacacatgctttctgctactgaag
ctgtactgtgatcagtcccagaggttggaccggctgctggccccagtgtcctctgtgtct
tctcaactggacttcaggattagctggctgctgcacaagctgctgcagtcctttggcttt
ggccatctgtccgcaactgcagccgagaccttgcacacaagctttgcagcacagctcgag
tcgtggggcctgtggccttgggcagtatttgctctgctgcacttggaggatgccacgggg
cgccaaaaagccgtcactgagcttcttgtgcgacacgcgtcaggttcactcaggggctct
gatcctgagactggcctcaccgaagatgagacttttgtctgtgacaaactgactgttcca
cctgcttgggtttaccatgccaaggcaattcgtgccagcactgaaggcaacttcaaggac
aaagcaatcttccttctcaagggtggaatctggaatgaagctcatgaaaccatcgtccgc
caccttgccacagaggctgtcattgatgacaagcttggcgagcttgcagagctcttgcaa
ccccttatagagcacagtgaccaaatccagaattggagcacaggtggcaaagtttttcac
gactttctttgtgtgtgcaacaccatgaagaaagcgacagagggtgaccttggtacatat
gaccttgaagcgatccgaccagcagtgctttctctgtgtggttcgatatccagccttgta
tgcaggacaacaagagacaggctgtgccagacagagatagcaaagaagactgctatggtc
cttcagcttatcaccagtgctgacagtggtgcaccagacagtgctatgcatgcagcgtgc
cacaacatcgaactgctctccatgcccgaggactactcgatcgaggactttgaattgctt
gctcgtacatgtacagaaaacgcgatcctttgtgatcttgccagctga
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