Rhipicephalus microplus (southern cattle tick): 119178127
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Entry
119178127 CDS
T07403
Name
(RefSeq) autophagy-related protein 16-1-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04136
Autophagy - other
rmp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119178127
04136 Autophagy - other
119178127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmp04131
]
119178127
03029 Mitochondrial biogenesis [BR:
rmp03029
]
119178127
Membrane trafficking [BR:
rmp04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
119178127
Others
Specific organelles associated proteins
Auto phagosome
119178127
Mitochondrial biogenesis [BR:
rmp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119178127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
ATG16
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Vps41
FPP
Crescentin
DUF5930
Glyco_hydro_39_C
HAUS-augmin3
Motif
Other DBs
NCBI-GeneID:
119178127
NCBI-ProteinID:
XP_037285184
LinkDB
All DBs
Position
9:complement(139665145..139838381)
Genome browser
AA seq
649 aa
AA seq
DB search
MLILLSFYPSGTSPSIIQHNDSSVISRCSVAVIAMATKGSTFVDWRQQIVKSLQDRNNMQ
CKQFEDIIVFKVPFNTVEATGPSSNSKGTQLFERVDSLRSNNVQLTVQKERLQQENLQLQ
MNAESSLGKPRAALETKIYQLQEEMTELLRHKSEHSQQLIDAKNSLEEKERQLHLKDTRI
QECEAELDLLKEKLSATAKELQDMKDANQLLKDEHEALQLVYNSLERNFSTLERDHQDLV
KRWMALKSRDADKLNAENERMLRAPMEWCTMKAPLCRLKQAQVKRDLEDAAREPVVVPND
STRAVPPVCLQSFVPNRLLLKYEAHDGEVNAVQFSSSGRLLCTGGGDRKVKIWEFTRDQA
LLRGTLGGSNATVMSLDMDTGENLILAASNDFSSRVWTLSDQRLRHTLTGHSRKVLAAKF
LGDTGRVASGSHDRTLKIWDLRSRAYGARVIPTRRKPRKPSASVLNVPAALLRAYPTNDP
PRIRTIFAGSSCNDLVASDSGGTTIISGHFDKRLRFWDSRAESSANEIVLGGLISSLDLS
ADRCQLLCCVRDDTIKLLDVRMNQVLISFQDDNFKVACDWTRAKFSPDASYVAVGSHDGT
LFIWNTQTAKLEKKLKEMSSPIIACSWNLRGDYIASSDRDKRVCIWSQV
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgctcattctgctaagtttctatccatcagggacttcaccatcgattattcaacacaat
gatagcagcgtcatctctaggtgttccgtggctgtgatagcaatggcaactaaaggaagt
acgtttgtggactggaggcagcaaattgtgaaatctttgcaggacagaaacaacatgcaa
tgcaagcagttcgaagacatcattgtgttcaaagttcccttcaacactgtggaggctaca
ggcccctcgtctaatagcaaaggcacgcagcttttcgagcgtgtggactctcttcgttca
aacaatgtgcagctgactgtgcagaaggaacgcctgcagcaggaaaacttgcagctccag
atgaatgcagagtccagccttgggaagccacgggcagcgctggaaaccaagatctaccag
ctgcaggaggagatgacagagttactacgccacaagtctgagcactcacagcagctgatc
gatgccaagaacagcttggaagaaaaagagcgccaactgcacctcaaggacacaaggatc
caggaatgcgaagccgagttggacctgttaaaggaaaagcttagtgccactgcaaaggag
ctgcaggacatgaaggatgccaatcagctcttgaaggatgagcacgaagccctgcagctg
gtgtacaacagcctggagcgcaactttagcactctagagcgagatcaccaggacctcgtc
aagcgctggatggcgctcaagtcgcgagacgccgacaagctcaatgctgagaatgagcgc
atgctgcgagcaccaatggagtggtgcacaatgaaggctcccctgtgcaggctgaagcaa
gctcaagtcaagagggacctggaggacgcagcaagggagcctgtggtggtgcccaatgac
agcacccgggcggtgccacctgtgtgcctgcagtcatttgtgccgaatcggctgctgctg
aaatatgaggcgcatgatggggaggtgaatgcagtgcagttctcatcttctggccgtctc
ctctgcacgggtggtggtgaccgcaaggtgaagatctgggagttcacccgggaccaggct
ctgctgaggggcaccctgggtgggagcaatgcaaccgtcatgtcgctcgacatggacact
ggggaaaacctgatcctggcagcctcaaatgacttctctagcagggtgtggacgcttagc
gaccagcggctgaggcacacgctgactggccacagtcgtaaagtcctggcggccaagttt
ctgggcgacacggggcgagttgcctcaggaagccacgatcgtaccctcaagatctgggat
cttcgcagtcgagcctatggcgcacgggtaataccaacgagacgcaagccaaggaagcca
agtgcaagcgtcttaaacgtgcctgctgctctgctccgtgcgtaccccactaacgatcca
ccacgtatccgcaccatatttgctggctcttcctgcaatgacctggtggccagtgacagc
gggggtacaacaatcattagtggccacttcgacaagcggctgcgtttctgggactcgcga
gcagagagcagtgccaacgagattgtgctcggtggcctgatcagctcgctggacttgtcg
gccgacagatgtcagctgctatgctgcgtgcgtgatgacaccatcaagctgctggatgtg
cgcatgaaccaggtcctcatcagcttccaggatgacaactttaaagtggcctgtgattgg
acaagggccaagttcagtcctgatgcaagctatgtggcggtcggctcccacgatggcact
ctcttcatttggaacacacagaccgccaagcttgagaagaaacttaaagagatgagttca
cccatcattgcctgctcctggaatctcaggggcgactacattgctagctcagatcgggac
aagagggtctgcatctggtctcaagtttga
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