Rhipicephalus microplus (southern cattle tick): 119178127
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Entry
119178127 CDS
T07403
Symbol
Atg16
Name
(RefSeq) autophagy-related 16 isoform X2
KO
K17890
autophagy-related protein 16-1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp04136
Autophagy - other
rmp04140
Autophagy - animal
rmp04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
119178127 (Atg16)
04140 Autophagy - animal
119178127 (Atg16)
04136 Autophagy - other
119178127 (Atg16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmp04131
]
119178127 (Atg16)
03029 Mitochondrial biogenesis [BR:
rmp03029
]
119178127 (Atg16)
Membrane trafficking [BR:
rmp04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
119178127 (Atg16)
Others
Specific organelles associated proteins
Auto phagosome
119178127 (Atg16)
Mitochondrial biogenesis [BR:
rmp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119178127 (Atg16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
ATG16
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
DSE1_N
ASA1
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_VPS8
CFAP251_N
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_Vps41
Tricorn_2nd
Glyco_hydro_39_C
CCDC186_middle
Rod_CreS
FAM76
DUF724
DUF5930
Motif
Other DBs
NCBI-GeneID:
119178127
NCBI-ProteinID:
XP_037285188
LinkDB
All DBs
Position
1:23363351..23538137
Genome browser
AA seq
565 aa
AA seq
DB search
MATKGSTFVDWRQQIVKSLQDRNNMQCKQFEDIIVFKVPFNTVEATGPSSNSKGTQLFER
VDSLRSNNVQLTVQKERLQQENLHLQMNAESSLGKPRAALETKIYQLQEEMTELLRHKSE
HSQQLIDAKNSLEEKERQLHLKDTRIQECEAELDLLKEKLSATAKELQDMKDANQLLKDE
HEALQLVYNSLERNFSTLERDHQDLVKRWMALKSRDADKLNAENERMLRLKQAQVKRDLE
DAAREPVVVPNDSTRAVPPVCLQSFVPNRLLLKYEAHDGEVNAVQFSSSGRLLCTGGGDR
KVKIWEFTRDQALLRGTLGGSNATVMSLDMDTGENLILAASNDFSSRVWTLSDQRLRHTL
TGHSRKVLAAKFLGDTGRVASGSHDRTLKIWDLRSRACIRTIFAGSSCNDLVASDSGGTT
IISGHFDKRLRFWDSRAESSANEIVLGGLISSLDLSADRCQLLCCVRDDTIKLLDVRMNQ
VLISFQDDNFKVACDWTRAKFSPDASYVAVGSHDGTLFIWNTQTAKLEKKLKEMSSPIIA
CSWNLRGDYIASSDRDKRVCIWSQV
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaaaggaagtacgtttgtggactggaggcagcaaattgtgaaatctttgcag
gacagaaacaacatgcaatgcaagcagttcgaagacatcattgtgttcaaagttcccttc
aacactgtggaggctacaggcccctcgtctaatagcaaaggcacgcagcttttcgagcgt
gtggactctcttcgttcaaacaatgtgcagctgactgtgcagaaggaacgcctgcagcag
gaaaacttgcacctccagatgaatgcagagtccagccttgggaagccacgggcagcgctg
gaaaccaagatctaccagctgcaggaggagatgacagagttactacgccacaagtctgag
cactcacagcagctgatcgatgccaagaacagcttggaagaaaaagagcgccaactgcac
ctcaaggacacaaggatccaggaatgcgaagccgagttggacctgttaaaggaaaagctt
agtgccactgcaaaggagctgcaggacatgaaggatgccaatcagctcttgaaggatgag
cacgaagccctgcagctggtgtacaacagcctggagcgcaactttagcactctagagcga
gatcaccaggacctcgtcaagcgctggatggcgctcaagtcgcgagacgccgacaagctc
aatgctgagaatgagcgcatgctgcggctgaagcaagctcaagtcaagagggacctggag
gacgcagcaagggagcctgtggtggtgcccaatgacagcacccgggcggtgccacctgtg
tgcctgcagtcatttgtgccgaatcggctgctgctgaaatatgaggcgcatgatggggag
gtgaatgcagtgcagttctcatcttctggccgtctcctctgcacgggtggtggtgaccgc
aaggtgaagatctgggagttcacccgggaccaggctctgctgaggggcaccctgggtggg
agcaatgcaaccgtcatgtcgctcgacatggacactggggaaaacctgatcctggcagcc
tcaaatgacttctctagcagggtgtggacgcttagcgaccagcggctgaggcacacgctg
actggccacagtcgtaaagtcctggcggccaagtttctgggcgacacggggcgagttgcc
tcaggaagccacgatcgtaccctcaagatctgggatcttcgcagtcgagcctgtatccgc
accatatttgctggctcttcctgcaatgacctggtggccagtgacagcgggggtacaaca
atcattagtggccacttcgacaagcggctgcgtttctgggactcgcgagcagagagcagt
gccaacgagattgtgctcggtggcctgatcagctcgctggacttgtcggccgacagatgt
cagctgctatgctgcgtgcgtgatgacaccatcaagctgctggatgtgcgcatgaaccag
gtcctcatcagcttccaggatgacaactttaaagtggcctgtgattggacaagggccaag
ttcagtcctgatgcaagctatgtggcggtcggctcccacgatggcactctcttcatttgg
aacacacagaccgccaagcttgagaagaaacttaaagagatgagttcacccatcattgcc
tgctcctggaatctcaggggcgactacattgctagctcagatcgggacaagagggtctgc
atctggtctcaagtttga
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integrated database retrieval system
