Rhipicephalus microplus (southern cattle tick): 119178458
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Entry
119178458 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119178458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119178458
Spliceosome [BR:
rmp03041
]
Complex B
Other components
Prp19-related factors
119178458
Complex C
119178458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
RRM_YTH1
zf-CCCH_2
RRM_occluded
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_3
zf-CCCH_12
RRM_3
RRM_5
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
119178458
NCBI-ProteinID:
XP_037285561
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All DBs
Position
9:complement(71389907..71391771)
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AA seq
423 aa
AA seq
DB search
MATSKSANTYNRLNWEEAEFPILCQTCLGDNPYVRMTKERFGKECKICSRPFTVFRWCPG
GRMRFKKTEVCQTCSKLKNVCQTCLLDLDYGLPVQVRDNALSLRDDMPKSDVNKEYYSQN
MEAAVADGDPSQPYGALAKAQSPSDLLMKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIRDRYYGVNDPVADKLLRRAAAMPKLEPPEDTSITTLYVGNLG
DRLTEKDLRDHFYQYGEIRGVTMLARQQCAFVQFTNRVSAELAADKTFNKLILGGRRLVI
KWGRPLARQVTPSGPEGAEGRPPGPPLEPVPGLPGALPLPPDELANNYFNLAPLHPPPVP
FPPPPPPPTAFLVPPGEAVLSPPLPPPPGLAPPGTVPPPLPLMRALIHYPSQDPQRLGSR
GKP
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgaaaagtgcgaatacctacaatcggctcaattgggaagaagccgaattc
cccatcctctgccagacatgcttgggcgataacccgtacgtacgcatgaccaaagagcgg
ttcggcaaggagtgcaaaatatgctcgcgccctttcaccgtattccggtggtgtcccggc
ggccggatgcgcttcaagaagaccgaagtctgtcagacgtgcagcaagctgaagaacgtg
tgccagacgtgcctgctggacctggactacggcttgccggtgcaggtgcgcgacaatgcg
ctcagcctgcgggatgacatgcccaagtcggacgtcaataaggagtactactcgcagaac
atggaagcggccgtggctgatggcgaccccagccaaccgtacggggccctcgccaaggcg
cagagccccagcgaccttctgatgaagctggcgcgtaccacgccttactacaagcgcaac
aggccacacatctgcagcttctgggtgaaaggcgagtgtaagagaggcgaggagtgcccg
taccggcacgagaaacccacggacccggacgatccgttggccgaccagaacatccgcgac
cgctactatggcgtgaacgaccccgtcgccgacaaactgctgcgtcgggcagccgccatg
cccaaactagagcctccggaggacacttctatcaccacgctgtacgtcggcaatttgggc
gaccggctaacggagaaggacttgcgcgaccacttctaccagtacggcgagatccgtggc
gtgaccatgctggcgaggcagcagtgcgccttcgtccagttcaccaaccgcgtcagtgcc
gagctggccgccgacaaaacgttcaacaagctcatcctcggcggccgcagactcgtcatc
aagtgggggcgcccgctggcgcgccaggtgacaccctcggggcccgaaggcgccgaaggt
agacccccgggaccgccgctcgagcctgttccgggcctaccgggcgccctgccgctacca
cccgacgagctggccaacaactacttcaacctggccccgcttcacccgcctccagtcccg
ttcccgccaccacccccgccgcccacggcgttcctcgtacccccgggcgaggctgtgcta
tccccgccactaccgcctccccctggactcgcgcccccgggaaccgtgcccccgccgctg
ccactcatgcgcgccctcattcactacccgtctcaggatccccagcgtctgggcagcagg
gggaaaccttag
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