Rhipicephalus microplus (southern cattle tick): 119178658
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Entry
119178658 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: transcription termination factor 2-like
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119178658
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
119178658
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
119178658
NCBI-ProteinID:
XP_037285777
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Position
9:complement(88394549..88518793)
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AA seq
961 aa
AA seq
DB search
MESSGEGGKKTGEQPESVRREKSEAFSRHRGDDRVAGQHVVVMPPAPPLQGSSETKKVAA
TFPPTTKSREALELEIQKKKKVIGTIKLNTLPDGGRRLKDQLKELEDQLSLLCLSATSNA
STKGISAKNTSAAAEHVSRGEERSGMAFERAVQQADTKAELPAPTAKELKKSAPTERGAG
KLDTFKDSQPYKNSQTKHSADAHHASLSASRGNDKKPSDRSSEDVGKSNALPKSPEMQRP
PDSRDYRAQSSSPKHLPEEGDLSSSKCESSSQCPTGDVSTKGILISPSESAAEGPGLGDS
VVAKRRPVSPVARVGVCQEDSRPPTSALHSVYDRRVLLTSPLPLSKVAVSSAAVKKGATS
ETLGTRISRGLSQQCTARLQPLIQSLSSQPDEWDESPQPQGVRTALMAHQRQALQWMLWR
EEQEAPGGILADAMGLGKTLTMLSLVEQQRSRDKAHKLAAKIKSNDKTDGKNDSETAAPA
PPRGGTLVVCPLSLLHQWEEEVQRHLPGQWQVHVHHGRNRTVDPEELARCDLVVTTYDTI
SSDWARVDATGKSGLSPLFTVKWRRLVLDEAHNIRNLHTRRAKAACALLAWSRWALTGTP
VHNDLNDMRSLLKFLQCHPFDDDSFWKQWVKENPGPEALAVVMKCVLLRRTKEQMGKDGK
PLVPLPQKSIILHKLSLEGTEAKVYKELDEWSRSSGPEKYRDPVTGRELYRNVGSRRFVM
LIRLQQACSHPALLKKKVLEDAAIDTDELLSAGMAGLQLSDDLAANEDRLDALNLDKYAS
AQEFDIAYVSCKIKTLLDMLLKVREESNNQDKSVVVSRWTSLLSLVRHHLDRRGIPSVTI
QGSVPGHQRASYVAKFNDQREGPTVMLLSLEAGGVGLNLVGGNHMFVLDVHWNPALEAQA
FDRIHRVGQTKTVVINRLICADTIEERILELQKHKQQLAESVVARRRLTANDYDFLFAKV
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgtcgggtgagggcggcaaaaaaacgggcgagcaacccgagagtgtccgtcga
gaaaaatcggaggcgttctcgcgtcaccgtggcgatgatcgcgtggccggccaacacgta
gtggtgatgccacccgcaccaccgctgcaaggctcgtcagagactaagaaagtggcggct
acgttcccacccacgactaagtcaagagaggcactggagttggagattcaaaagaaaaag
aaagtgattggaaccatcaagctaaacacccttcctgacggaggcagacggctcaaagac
cagctgaaagaactggaggaccagctctcccttctgtgcctgtcggcaacaagtaatgcc
agcacgaaaggcatctctgcaaagaatacgagcgcagctgctgaacatgtttcccgaggg
gaggagagatcaggcatggcattcgagagggcagtgcaacaagcagacacaaaagccgag
ctgccagctcccactgccaaagagctgaaaaagagtgccccaactgaaaggggtgctgga
aaacttgacacttttaaagacagccagccttacaagaactctcaaacgaagcatagtgct
gatgcacatcatgcaagtttgtctgcatcaagaggcaatgataaaaagcctagtgacagg
tcaagcgaggatgtaggaaagagcaacgctctgcccaagagtccagaaatgcaaaggcca
cctgattctagagactacagagcgcagagctcatcgcccaagcatcttccggaagagggt
gatctgtcgagcagcaagtgtgagtcaagctctcaatgcccaacgggagatgtttcaact
aaggggatattgatatcgccttcagagagtgcggcggaaggaccaggacttggtgacagc
gtcgtggccaagaggcgtcccgttagccccgtggcacgtgtcggcgtctgccaggaagat
tctcggcctccgacaagtgcactgcatagcgtatacgaccgccgcgttctcctcacgtct
ccattgccgctcagcaaagtggccgtttcgtcggctgcagtgaagaaaggagccacctca
gagacgctgggcactcgcatctccagaggcctgtcgcagcagtgcaccgctcgcctgcag
cccttgatccagagtctgtccagccaacctgacgagtgggacgagagcccccagccgcaa
ggggtacgcactgccctgatggcccaccagcgacaagccctgcaatggatgctttggagg
gaggagcaagaggctccggggggcattctcgctgatgcaatgggtctgggcaagacgctg
accatgttgtcacttgtggaacagcagcggtcaagggacaaggcgcacaagttggctgcg
aaaatcaagagtaatgacaaaactgatggcaagaacgacagtgaaacagcggctcctgcg
ccacccaggggtgggacactggtggtttgcccgctgtccctgctgcaccagtgggaggag
gaggtgcagcgacaccttcctggtcaatggcaggtgcacgtgcaccacgggcgcaaccgc
acagtcgacccagaggagttggcacgttgcgacctagtcgtcaccacttacgacaccatc
agcagtgactgggctcgcgttgatgctacaggcaagagtgggctgtccccgctgtttaca
gtcaagtggcgccgcctggtactggacgaggcacacaatatccgcaacctgcacacacgg
cgtgccaaggcggcctgtgcattgctcgcatggtcacgctgggccctcacggggactccc
gtgcacaacgacctcaacgacatgcgttccttgctcaagttcctgcagtgtcacccattt
gatgatgactccttttggaagcagtgggtcaaggagaaccctgggcctgaggcactcgcc
gtggtgatgaaatgtgtcctgcttcgccgaacaaaggagcaaatgggcaaggatggcaag
ccactggtgccactgcctcaaaaaagcatcatcctccacaaactttctcttgagggaact
gaggctaaagtgtacaaggagttggacgagtggtctaggtcgagtgggcccgagaaatac
agagaccccgtgactgggcgcgagctgtaccgcaacgtgggctctcgacgcttcgtcatg
ctcattcggcttcagcaggcctgctctcatcccgctctgctcaaaaagaaagtcttggag
gatgctgccatagacacagacgagctcctctcggcaggcatggctgggctccagctgtcg
gatgacttggccgcaaatgaagacaggctggatgcactgaacctagacaagtacgccagt
gcacaagaatttgatattgcctacgtcagctgcaagatcaagactctgctcgacatgctt
ctgaaggtgcgggaagagtcaaacaaccaagataagagtgtggtggtgtctcggtggact
tcactcctgtcactggtgcgccatcacctggatcggcgaggtatcccctcggtcaccatc
cagggtagcgtccccggtcaccagagggcttcctacgtggccaagtttaacgatcagcga
gaaggacccacagtaatgttgctctccctcgaagctggtggcgtgggccttaacctggta
gggggcaatcacatgtttgtcctcgacgtgcactggaaccctgctctggaagcacaggca
tttgatcgtattcaccgtgtggggcagaccaaaacggttgttatcaacaggctcatttgt
gcagacaccattgaggagcgtattctggaactgcagaagcacaagcagcagcttgcggaa
tctgtcgttgcacggaggcgcctgacggccaacgactacgacttcctttttgccaaagtc
tcttga
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