Rhipicephalus microplus (southern cattle tick): 119178728
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Entry
119178728 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rmp01002
]
119178728
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rmp04121
]
119178728
Enzymes [BR:
rmp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119178728
Peptidases and inhibitors [BR:
rmp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119178728
Ubiquitin system [BR:
rmp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119178728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
DAGK_cat
Motif
Other DBs
NCBI-GeneID:
119178728
NCBI-ProteinID:
XP_037285861
LinkDB
All DBs
Position
9:100173384..100675906
Genome browser
AA seq
2422 aa
AA seq
DB search
MTARGNPQQQQQQGSGGGDQETPPPASSNHEQLAEAPAEDPPVVVEEEEEEFPLAELARL
DEMINRPRWVVPVLAKGELEVLLEASIRLCRQGKDVQSEPCQRFFRDGLTISFTKILTDE
AVSGWKFEIHRCIMKNCERLVELCVTKLHQDWFPLLDLLAMVLNPHNKFHSYNGTRPSDS
VPPGSQISDDQVFARPVDTRTPKGWVVDLINRFGNLGGFNILLERFRSGPPLSVAVIAAL
IRPFGLCHSLLQVPTVERYLMPIVSLVPTFLERLSDEELKREAKNESKNDALAAIVRALR
SLAAMVPHQEETVRALEMFRLRMILRLLQISSFNGKMNALNEVNKVIANVSYYAHRHTDE
EEWLTAERMAEWIKENRVLQIVLRDSLHQPQYVEKLEKIVRFVIKEKALTVADLDDLWAA
QHGKHEAIVQNVHDLLAKLAWDFSPDQLDHLFGRFQASWASAAKRQREKLLELIRRLAED
DKEGLMAHKVLQLLWNLAHSREVPTDTMELALSFHVKILDYSCSQDRDAQKTLWLDRCVQ
ELRQDPQWALPALRHMQEVAGLYSEAPMGPARAAGTGGGPAPGGQALYRHEVINRLQQQH
SLVVLVADGLSAYMAHARQLLPERPDPTQVYGDSRYSHVQQVQERLKFLRFLLKDGQLWL
CAAQAKQIWHCLAENAVYPSDREACFKWFSKLMGEEPDLDPEINQDFFEQNVLQLDPALL
TESGLRCFERFFRAVNCRQGRLLLRRRAHLLEDPELMGADYLWRVVLHAQDAVADRAIEL
LRETYTNLGPRLQGSRTDIHEDMVQSCMDRLKAAYDTVCALGGDGAARESANRMVRVLRV
LSEYVAQCDGDFPHDRVILPMARAHRGRQVVLTVRFPSQGRQVEDLEIIAHTNDTLGAIR
RQIYTRVKVNNASTKLDLFLGTELLDPADDKKLIGQLPIKDKAVLSAKLSQLSAQLPSSP
ESSSDSSAGSPQHHYDGPHADAEACLPGVLMSKQPKYTQFLFKLADLGSTLPMAELRDSA
LGLLKLLPADVQTVERLRELCERGEGDPSGAALEALLQTLSPTELLYHLEVAYSLLLPAL
APCSKEAQEFQAGFVRAGGVAVVLRMLSDLNHADACNGRGSLLLLKLSKLLLTVVGHCLA
QQAHEGLAQALKHVPSMGPEGTLHSVGMRLATLLHNHNQALHLPDLDTIQAVLKLAWDSA
GLPAAEEGSASNQVADEELCQEALETLTLALSLQPSALSQLLGNPDWSRFVLDLLLHCPH
RCIRQCAADQLCLIATKCTASQHCLLSLVELLFAQLPRLEDLAGSSQELFGLLCRLLGAA
CRCPLPALQQLLADEIGWLKRIREKVQQTGGLLDAEESLLEGHLGVARELVLLLSPADKH
RIGSDSSNTVHGNLVKELLEDFAFPASRVEAQLRGGAGDGGGTAAVAVCPGPDALRAALD
LLVALCTQCPENLGTCAALLSDMFYADQPPLQEWEYLPPVGPRPRGGFVGLKNAGATCYM
NSVLQQLYMIESIREGILAVEGATTDPNEDFSGEEQPDHEEVRPCEEGREEHRRDYHLGV
LKQVQAVFGHLAASQLQYYVPRGFWHHFKLWGEPVNLREQHDALEFFNSLVDSLDEALKA
LGAPCLLAKALGGTFADQKICRGCPHRYSREESFTTLNIDIRNHSNLLDSLEQYVKGDLL
EGANAYHCDKCNKKVDTVKRLCIKRLPPILAIQLKRFDYDWERECAIKFNDYFEFPRELD
MEPYTVRGLARLEGELMDEETAESELGATRYRLTGIVVHSGQASGGHYYSYIYTRPPGGV
YRWYKFDDGEVSDCRMEEEEEMKNQCFGGEYMGEVFDHMLKRMSYRRQKRWWNAYILFYQ
RTPLADSMANLSIQPKVATLPRMPAAIERSVWRQNIKFLHTRNQFSPEYFQFTKKLVSCN
APFVTLAPDQDRLTPEAEELALVSVQLASKFLFQTAFHTKKTLRGSASDWYEVVCVHLRH
SRNVRLWFANQVLFAHPHRLAEYLLECPTTEVRSAFAKIVVFLAHTSARDGPYTPLCPIS
ATVESAGLLSNLNAASLSDHLLVAVLSLVNKEVSEHGRHVAQYFGFFYMYACYGVTERLQ
LLRLNVLCTLMLVAVDEGPGPPIKYQYADLSKLYQMVSLLVRCCDVSTKTHSCLPNAVPL
PNPYMGDQLCQEYLMPIQPQVAACLYNKNGYVKKVIEDASGAEDTLKLLQFCSWENPQFS
SAVLGELLWQVAYTYTYELRPFVDLLLGVLLLEDSWQVHRIHNALRGLPDDREGLFDTIQ
RSKSHYQKRAYQCIKCLVALFDSCPAAAHMLHANGELKRKWAAAVDWLNDELERRPYGAG
SQYGYSQWSPPAQSNETSNGYFLERSHSARLTLSRAIQLCPEEEPEEAELTEEAPAFAPP
STLRYQSEEPHSKEDSRRTDDA
NT seq
7269 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccgagggaacccccagcagcagcagcagcagggaagtggtgggggtgaccag
gaaacaccaccgcctgccagcagcaaccatgagcagctcgctgaggcccctgcggaggat
cctcccgtggtggtggaagaggaggaggaagaattcccgctggccgagctggcacgcctg
gacgagatgatcaaccggccacggtgggtcgtgcctgtactagccaagggcgagctggag
gtgctgctcgaggcatccatccgcctctgcaggcaggggaaggatgtgcagagtgagccg
tgccagcggttttttcgtgatggcctcaccatctctttcaccaaaatactcactgatgag
gcagtcagtggttggaagtttgagattcaccgctgcatcatgaagaactgtgagcggctt
gtggaactgtgtgttaccaagttgcaccaagactggtttcctttgcttgacctgcttgcc
atggtgctgaacccacacaacaagttccactcgtataacggaacgcggccctctgattcg
gtgcctccaggatcccagatctcggacgaccaagtatttgctcgtcctgttgacaccagg
acgcccaagggctgggtggtggacctgatcaaccgctttggcaacctggggggcttcaac
atcctgctagaacggtttcgctcaggcccgccactgtcggtggctgtgatcgctgcactc
attagaccgtttgggctgtgccacagcctgctgcaggtgcccaccgtggagcggtacctg
atgcccatcgtgtcactggttcccacctttctggagcgcctgtcggacgaggagctgaag
cgagaggccaagaacgagagcaagaatgatgccctggcagccattgtgcgtgccttgcgc
tctctcgctgccatggtgccccaccaagaagaaactgtgcgagcacttgagatgtttcgc
ctgcgcatgatcctcaggttgctgcagatctcctcattcaatggcaagatgaatgcgctc
aacgaggtgaacaaggtgattgccaacgtgtcctactacgcccaccgacatactgatgag
gaggaatggctcacagctgaacgcatggcggaatggatcaaggagaaccgggtgctgcag
attgttctgcgagacagcctgcaccagccacagtacgtggagaagctggagaaaattgtg
cgctttgtgatcaaagagaaggccctgacagtggccgacttggacgacctgtgggcggcg
cagcatgggaagcacgaggctatcgtgcagaatgtgcacgacctgctggccaagcttgcc
tgggacttctcgcccgaccagctagaccacctgttcggccgctttcaggccagctgggcc
agcgcggccaagcggcaacgcgagaagctgcttgagcttatccgccggctggccgaagat
gacaaggaaggcctgatggcgcacaaggtgctccagttgctgtggaacctggcgcacagc
cgcgaagttcccactgacaccatggagctggccctgagcttccacgtcaagatcctcgac
tacagctgttcgcaagaccgggatgcccagaagaccctctggctcgatcgatgcgtgcag
gagctgcggcaggacccgcagtgggcgctgcctgcccttcgtcacatgcaggaagtggcc
ggcctgtactcagaggccccaatgggtcccgcacgcgcagcgggcactggaggcggacca
gcaccgggaggccaggccctgtatcgacacgaggtgatcaatcggctgcagcagcagcac
tcgcttgtggtgctggtagcagatgggctgtcggcctatatggcacatgcgcgccagctg
ctgcccgagcggcccgacccgacgcaggtgtacggggacagccgctacagtcacgtgcag
caggtgcaggagcggcttaagttcttgcgcttcctgctgaaggacggccaactgtggctg
tgcgctgcgcaggccaagcagatttggcactgccttgccgagaacgccgtgtacccgtcc
gaccgggaggcctgcttcaagtggttctccaagttgatgggcgaagaaccagacctggac
cccgagataaaccaggacttctttgagcagaatgtgctgcagttagacccggctttgctc
acggagagcgggctacgctgtttcgagcgcttcttccgtgccgtcaactgtcgccagggg
cggttattgttgcgccggcgtgcacacctcctcgaggatcctgaactcatgggggccgac
tatttgtggcgagtggtgctgcatgcgcaggatgctgtggctgaccgagctatcgagctt
ttgcgagagacttacaccaacttggggcctcggctacagggctctcgtacagacatccac
gaggacatggtgcagtcgtgtatggaccgtctcaaggcagcctacgacacggtgtgtgct
cttgggggggacggtgctgcccgtgagagtgccaaccgcatggtgcgagtgctgcgtgtg
ctgtccgagtacgtggctcaatgtgacggggactttcctcatgaccgagtcatcttgcct
atggctagggctcaccgtggaagacaggtggtgctgacagtgcgctttcccagccaagga
cgacaggtggaagacctggagatcattgcccacacaaatgacacattgggtgcaatacgg
cggcagatatacaccagggtgaaagtgaacaatgcaagcacaaagctggacctcttcctt
ggcactgagttgcttgacccagccgatgacaagaagctcattggccaactacccatcaag
gacaaagcggtgctgtcagcgaaactgagccagctgagtgcacagttgccatcatcacca
gaatccagttcagacagctcagcaggctcaccacagcaccattacgatggccctcatgct
gatgccgaggcctgcctacctggggtgctgatgtcgaagcagccaaaatacacccagttc
ctgttcaagcttgcagacttgggcagcactttgccaatggctgagctgagggacagtgct
ctcggtctgctgaagctgctgcctgctgatgtgcagactgtggagcggctgcgtgagctg
tgtgaacgaggagagggtgatccgtcaggggctgccttggaggccctgctgcagaccttg
tcaccgactgagctgctctaccacctcgaggtggcctactcattgctgttgcccgccctg
gcgccttgctctaaggaagcacaggagttccaggcgggctttgtacgtgcgggtggtgtg
gctgtagtgctccgcatgctgagtgacctcaaccatgccgacgcctgcaatgggcggggc
tcgctgttgcttctgaagctgagcaagctcctactgacggtggtgggccattgcttggct
cagcaggcgcacgagggtctggcccaggccctgaagcatgtacccagcatggggccagag
ggcactctgcattcggtgggcatgcggctggcgactctgttgcacaaccacaaccaggcc
ctgcacctgccggacctggacaccatccaggcggttctcaagctggcctgggactctgct
gggctgccagccgcagaggagggaagtgcttccaaccaggtggctgatgaggagctgtgc
caagaggccctggagacactgacgctggcgctgagtctgcagccctctgccctgtcacag
ctgctggggaaccctgactggtcacgctttgtgcttgacctgttgctgcactgcccacac
agatgcatacgccagtgtgcggctgaccagctgtgcctgattgcgaccaagtgcactgca
agccagcattgtctgctgtctctggtggagttgctgtttgcccagcttcctcgcctggaa
gatctggcggggagcagccaggagttgtttgggctcctgtgtcgtctgctgggagctgcc
tgccgttgccctctacctgctctacaacagctgcttgccgacgagattggatggctgaag
cgcatcagggaaaaggtgcagcagacaggtggcctgctggatgccgaggagtcccttttg
gaaggtcacctgggtgttgcacgcgagttggtgttgctgctctcaccagccgacaagcac
cgcataggttcggactccagcaacactgttcacgggaaccttgtcaaggagctgctagag
gacttcgcctttccggcgtcccgggtggaagcccagctgcgaggtggggccggggacggt
gggggcacagcagcagtggctgtgtgcccgggaccagatgccctgcgtgctgcccttgac
ctgctagtggctttgtgcactcagtgccctgagaatctgggaacctgtgcagcactcctg
tcagacatgttctatgctgatcagccacctctgcaggagtgggagtacctacccccggtg
ggacccaggccccgtggagggtttgtgggcctcaagaatgctggggccacctgctacatg
aactcggtcctacaacagctctatatgatcgagagcatccgtgagggcatcctggccgtg
gaaggggcaactaccgatccgaacgaggacttctctggagaagaacagcccgatcatgag
gaggtgcgtccctgtgaagaaggccgggaggagcatcggcgtgactaccaccttggcgtg
ctgaaacaggtgcaggctgtttttgggcaccttgcagcatcacagctgcagtactacgtt
ccgcgtggcttttggcaccacttcaaattgtggggtgaacctgtgaacctgcgagaacag
catgacgcgcttgagtttttcaactccctggtggactctctagatgaggccttgaaggcc
ttaggtgcgccctgcctgctggctaaggcccttgggggcacctttgccgaccagaaaatc
tgccgtggatgcccacaccggtactctcgagaggagtccttcacaacgctcaacatcgac
atccgcaatcacagcaatctgctggactcgctcgaacagtatgtcaaaggagaccttctg
gaaggggccaatgcctaccactgcgacaagtgcaacaagaaggtggacacagtgaagcgg
ctgtgcatcaagcggctgcccccgatcttggccattcagctgaagcgctttgactatgac
tgggaacgggagtgcgccatcaagttcaacgactactttgaattcccccgtgagctggac
atggagccgtacacggtccggggcctggcccgactcgagggtgagctcatggatgaggag
acggccgagagcgagctgggtgcaactcgttaccgcctgacaggcatagtggtgcacagt
gggcaggcttctgggggccactactactcctacatttacaccaggccccctggtggtgta
tatcggtggtacaaatttgacgatggggaagtgtccgattgccgcatggaagaggaagag
gagatgaagaaccagtgctttgggggagagtacatgggtgaggtgtttgaccacatgctg
aagcgcatgtcctaccggaggcagaagcgctggtggaatgcctacatcctgttctaccag
aggacgcccctggctgattccatggccaacctcagcatacagccaaaggtggcaactttg
ccccggatgccagcagccattgagcgcagcgtgtggcggcagaacatcaagtttctgcac
actcgcaaccagttcagccccgagtacttccagttcaccaaaaagctggtcagctgcaat
gcgccttttgtcactttagctcctgaccaggacaggctgactcctgaggctgaagagctg
gccctagtgagtgtgcagttggcgtccaagttcctcttccaaactgctttccacacaaag
aagacactcaggggttcagcttcagactggtacgaagtggtgtgcgtgcacctgcggcac
tcccgcaatgtgcgtctctggtttgcaaaccaggtgttgtttgcgcatcctcatcgcttg
gctgagtacttgctggagtgccccactacagaggttcgcagtgcttttgccaagattgtg
gtattcctggcacacacctcggcaagggatggcccctacacaccattatgccccatatcg
gccactgttgaaagtgccggccttctgtccaacctgaacgctgccagcctgtctgaccac
ctgcttgtggctgtcctgtctctcgtcaacaaggaggtgtcagaacatggccgccacgtg
gcccagtacttcggctttttctacatgtacgcctgctacggagtcacagagcggttgcag
ctgcttcggctgaacgtgctgtgcacactgatgctggttgccgtggacgaggggccgggt
ccgcctatcaagtaccagtatgccgacctgagcaagctgtaccagatggtgtccctgctg
gtgcgctgctgtgatgtctccaccaagacgcactcctgtctgccgaatgcagtgccattg
cccaacccgtacatgggtgaccagctgtgccaggaatatctgatgcccattcagcctcaa
gtggcggcgtgcctctacaacaagaacggctacgtcaagaaggtgattgaggatgcgagt
ggcgccgaggacactctgaagctgctgcagttctgctcgtgggagaacccgcagttctcc
tcagccgtgttgggtgagctgctgtggcaggtggcgtacacctacacgtatgaactgcgg
ccatttgtggacctgctactcggtgtgctgctactggaggactcgtggcaagtgcaccgc
atccacaatgcgctacgcggccttcccgacgaccgagaaggcctcttcgacacgattcag
cgctccaagagccactaccagaagcgggcttaccagtgcatcaagtgcctggtggcactc
ttcgactcgtgtcctgcggcggctcacatgctgcacgccaatggcgagctaaagcgcaag
tgggctgccgccgtcgactggctcaacgacgaacttgagcggcggccttatggagctggc
agccagtatggctacagccagtggtcaccaccagcccagtccaacgagacgtctaatggc
tacttcttggaacgatctcatagtgcccgactaacattgtcgcgtgccatccaactttgc
cctgaagaggagcccgaggaggccgagttgaccgaggaggcaccagcctttgcaccaccc
agcacgctgcgctaccagtcagaggagcctcacagcaaggaagactcccgcagaaccgac
gatgcatga
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integrated database retrieval system
