Rhipicephalus microplus (southern cattle tick): 119179317
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Entry
119179317 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX24-like
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmp03009
]
119179317
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119179317
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119179317
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119179317
NCBI-ProteinID:
XP_037286283
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All DBs
Position
1:204650687..204652963
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AA seq
679 aa
AA seq
DB search
MPKRSVVIQSKARWKPVEIEPSTVQNLECEGFSGIEELTSYDIVRQDDSSKRSTHTPDKP
TKKKKRKRARKPTNAEASTTVNGDDAGSDDEDVEHSHEKKLKCDGPDMSAWLNCHVPEPV
LRALAELKFTEPTEIQAQTLPAAIRDHLDIMGAAETGSGKTLAFGIPLLHHIMERKSRLS
AEGETKAMPLQALVLTPTRELAIQVTRHIQDVAKYTNVRIVNVVGGLSAEKQLRLLKRKP
EIVVATPGRLWELVDQGAPHVSDVSKVRYLVIDEADRMVEKGHFEDLTRLLDVMNAPYED
GEEKRRRQNFVFSATLTMVHDLPKRMKNKPKKHKLSEKEKVEELMRTIGISSKPKVVDLT
RKLGTAESLCESRIVCPSIGDKDSRLYYFLLAHPGRTLVFCNSIDSVRRLVSVLDLLERS
PLPLHASMQQRQRLKNLDRFKNNPSGLLLATDVAARGLDIQGIQHVIHFQVPRTAEVYVH
RSGRTARARSGGLSVMLMEPGELHLYRKICKTLNRDEDLPDFPIDLSMLKAVQKRVDLAR
KLEAESHRARRTSYEDNWLQRAAKEMEIDLDERMLSNTDEKKKADTKRKLKAMQFQLSEM
LKKPLFPPGFSGKYLTKQGALEVPKVRMDDAALEAMEEWKKKKNAMVSPAEPTSKIIKKK
KTKRFPMWKQKVSKKQSNQ
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaggtcagttgtcatccagtccaaggcgcgatggaaacccgtcgaaatagag
ccctcaactgttcaaaacctagaatgcgagggcttctcgggcatcgaagagcttacgagc
tacgacatcgtgcgtcaggacgactcttcaaagcgatctacccatacgcccgacaagcct
accaagaaaaagaagcgaaagcgagcgcgcaagccgacgaacgcagaagcttcaacgaca
gtaaatggtgatgatgcaggaagcgacgacgaagatgttgagcattcgcacgaaaaaaag
ctcaagtgtgacggcccagacatgtctgcgtggctcaactgccacgttccggaaccggtg
ttgcgagcgctggccgaattgaaattcaccgagcccactgaaatacaggcgcagacattg
ccagccgccatacgcgatcacttggacatcatgggcgcagcggagaccggcagcggcaaa
acactcgcgttcggcataccccttctgcaccacatcatggagcgcaaatcgcgactgtcc
gcggaaggggagacgaaggcaatgcctctccaagctctggtcttgactcccacgagagag
ctcgccattcaggtgacgcggcacattcaggatgtggcgaaatacacgaacgttcgcatc
gtgaatgtcgtcggaggactttcggcagagaagcaactgcgacttctcaaacgcaagccc
gagatcgtggtagccacacctggtcgactctgggagctcgtcgaccaaggagcgccccac
gtgtcggacgtgagcaaagtccggtacctagttattgacgaggctgatcgcatggttgaa
aagggtcacttcgaagaccttacgcgcttgctggacgttatgaacgcaccttatgaagat
ggtgaagaaaagcgccggcgacaaaatttcgtcttctcggcgactttgaccatggttcac
gacttaccgaagcgtatgaaaaacaagcctaaaaaacacaagctgtctgaaaaggaaaaa
gttgaagagctgatgcgcaccatcggtataagttcaaagccaaaagtggttgacttgacc
cggaaacttggaactgctgagtcactgtgtgaatcgcgaattgtatgcccctcgattgga
gacaaagacagtcggctatattattttcttttggcacatccggggaggacattggtgttc
tgcaacagcatcgacagcgtgcggcgtttagtgtctgtgctggacctgcttgagcggtct
ccccttccactgcatgcctccatgcaacaaaggcaacgactcaaaaacctcgaccgcttc
aagaataacccatccggtcttttgcttgccacagacgtggcagcgaggggccttgacatt
cagggtatccaacatgtcattcacttccaagttccgcggactgccgaagtttacgtgcac
cgcagcggtcgcacggcacgggccagaagtggtggactaagtgtgatgctcatggaacca
ggagagttgcacttgtatcgcaagatatgcaagactctgaacagggacgaagaccttcca
gacttccccatcgacctgagcatgctgaaagcggtgcagaagcgtgtcgacctggccaga
aagcttgaggctgaaagtcacagggctcgacggaccagctacgaagacaactggctgcag
cgtgccgcaaaggagatggagatagatcttgacgagagaatgctttcaaataccgacgag
aaaaagaaggcagacacgaaacgcaagcttaaagcgatgcagtttcaactttccgagatg
ctgaagaagcctctgttccctcctggtttctcggggaaatacttgactaagcaaggagcc
ttggaagtgcctaaggtgcgcatggatgatgcagcactggaagccatggaagaatggaaa
aagaagaagaatgccatggtttcccctgcagagcccacatccaaaatcattaagaaaaag
aagaccaagagatttccaatgtggaagcagaaagttagtaaaaaacaaagcaaccaataa
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