Rhipicephalus microplus (southern cattle tick): 119179431
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Entry
119179431 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC119179431
KO
K04988
polycystin 1L2
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rmp04040
]
119179431
04091 Lectins [BR:
rmp04091
]
119179431
Ion channels [BR:
rmp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119179431
Lectins [BR:
rmp04091
]
C-Type lectins
Others
119179431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
PKD
REJ
PLAT
Ion_trans
PKD_4
GPS
WSC
Motif
Other DBs
NCBI-GeneID:
119179431
NCBI-ProteinID:
XP_037286395
LinkDB
All DBs
Position
10:135390134..135477283
Genome browser
AA seq
3029 aa
AA seq
DB search
MSSMTASIGGTPTKAALARLGLWIFVIGAIVENGNALKDGDCLRSDSASYFQLSPGGYDP
TKGMDGGRCQNLCASISAPYSGIQSNRYCLCSDDPFAERLTATKKDVCDKGEQLSTRFFH
SDLFSPIEGLRVMPSASVVNVGEEVTLHLAVKSGRNATVLFNFGEGLPGTRGTLSTEPRY
IYWRPGTYKIVVLATPVGASDLYTVRAEAMVVVTTAPDEDSVHWNCPALVEPGAGFTCHL
SVSAGADMTADVDPGDGSRRQVMKLPDVVPVLMGEPVPQFQMEEIVADEDDSADSGVLPM
ARTAHSGQIDVIHGYGSVPGKMDILLLRPTCQGCTFLGNNVTCHEGASLCSQEANCLRND
QCPKNQVYSIYKMVETISIMVNKGYFVQRLSSPVPIVAGDILGFTTSGGRLAYRVHPQGE
PSDLVKRNQLKGQAVRTDDLLEMGRRYLVGALFSSSVNLTYDYLYVEPGAYEFRISLQNR
HHDTTVRKMADVSSQEKLTSFRLEVSRNQVPTGTEVEITARMFGGSDVTMVWNFGDGQTT
REVVKSVLAGQRFLKKHVFKDPGTYVVQVNSSNLHGNFIARRSISVQRPVTEAWELFTNS
PVILPEAIYLTLTYPKTEKLPTDAVARISFGDRQKTKWKVPSESAEKVSQKFSHVYLRPG
YYNVAVNISNLISHYVLTTRVETATRTTGLVAKVQFQPTDDAPLRVGLGSANDIFPTTRP
VVFTVKTGTGIVEMFIIETAKGQLLANGTGKQLKYTLNFPEPGQNDVFVYAWNHVQQRTD
PFVVSFRSMEPIEGLDVYMNQTTPKDEHIRNFMVTFDLMGTDTCVVVDYGDESPKRAYGS
RSQCFTRYRPEQFQLEGELEDPLWLQNVYERGFDYVFTLTAFNDISEQTSVLNFTVNNEP
CKPPIIKIRNQVLDPENATIFYRLRPVELYTLTSVECNISIDVTRAWEAFLLNETGDPVR
QVDLATLDSRTKSMIFLPEFFLEAGLYKLRYNVNMSAPRAKPPMFHKRFAETYIEMKPSP
LLPQMSNGAQSRITRGFPQTLILNPGNYSINPDDPSDKNFSVTWFCRRVPNEVINRTIPD
DEQNVTEPLYHRLRHLENITAKGHDFDVAGFLADENMEDRGGCFGTGPGRINISGGDLEW
STIVFYKPNATYEILAKLEKPDRPPSWGAIQLVLMEKVPPSISVQCQTEKLCYPNDPIGQ
KINPVRVGLIGLCIENCDGEMIYNWEVFGSDNLTEVYLEDARDYLVGATEQKMALSDEFF
KVYYPTFGDFVARLTVTNQWGVSGISDLFLHINKPPENGICSFEPQEGRALMDKFKASCS
EWTDPEGQDIEFFAFWVRNVANGALTFLTYGPDSEVTLVLPYGEFQVGADVKDKEGATTR
VNMTTILTYLPTKQDFERYLGERSLDNADAAGDQARMNQMSQAISSLMNVRLPDELENEI
NYSDPSVLDRELEEQALLRAKMVRSVSSIMNVDTLSSLEQVGSALTAIAGDGSGVDNEGK
EVIIKLLKKTVSLASNLKVEAPQQLLDFCMYAVGTMGGIVSRMTQQLISGVVMPTDRAKA
VNIEYDTEIALEGEPEKESLFDGTVPMDVALARAVVLNEKKQAERQISTMVELTVDLVLA
ILRNIIVGEKPLEFRAPSGLGLTISMFSGGALSGRAIQHGDAVYIFPGICDVLASRPTCA
GNETLGVMAVSWPSILQSFGGGVDVLSEDTQTLQLVVLDENLYRVDVSNTTDYFEIIVPR
KGAKENATGLPEPTEFAPQVKWNEEMVYHQFVVPKPDSAVNIEITPHDASAQFLVYIKHR
VKPQLNAYDLMVNLSTIRSVNGTYDIFLDNALIANRTGFFYLGLVQPNGSLPEFSMEDPV
NLTLSEVSREFSTNYSVRIYTSGCYFFNSKLKMWSADGCFVANANYAVTKCKCNHLTSFG
SGFFVMPNTIDFSYVFANAGFADNVTIYMTVVVTMLVYIMLLIWARYEDKKDVEKLGALP
LQDNDLKDKYIYEIVVFTGDKKGAATDSNVFFILSGDDDETEVRTFGEQKRKIFRKGAVD
TFVMTVPRSLGRLNYMRIWHDNGGKGSLRSWHLRFISVRDVQTNARYDFIANKWFAVEKE
DGLTDRLLPVAGKDEATEFSHLFQLKSQKNLADGHLWFSVFMRPPKSRFTRVQRVSCCVA
LLYLSMLVNAMWYGRVPSKPSASSFNVGPFSLSPEQVGVGVMANLIVFPPTFLMITLFRR
SRLRRKRPNRITEALRQKRDSLVVSRASSAAAKPLGRAGKSESTMQLTETELNDVFEERP
QRRRLQQGRRKRKGKFMFPWWCRYVAWFLCLASIFVSIFFIWAYGVQFGDEKTRKWITSL
LVSFFMSVLITQPIKVFMLAIIFSSLFKSPDKDDDEAEEDEEDPELLEHEEWLHSDAPNH
RRRRLYKPQNSWELDRVREERLRELKMAAILREIGSYLFFLWILTVLSYGNRDPSAYFLQ
QSLRHEFIDNGKFMEISSAQQFWKWSRDVLVPNLKAGPWYNGDQPFGLRGFLGDRVNRIM
GFASLRQIRARPHSCRVEKLMRNLVDECRGQSNLLNEDKWSYKPGWKERADPDSPVDEWH
HRRAKELNGLPFWGRLTEVDVYGGGGYVVPLRGPNDKIKERLDYLEKSDWIDGGTRAVFV
EFSVYNAQVNLFGVVTIVAEFHPGGGVIPNVRIDAIRLMRYHQGFGLFVLLCELVFVGFI
VYFTMHEFRTFLNLRIDYFRSYWNIAELVALGLSYSAMFFYISRMVVTNKILKTFERSHG
NGYVKLQVVAAIDELFGYLMSFLIFICILKFTKLLRFNKRIGILYSTLAQCSRDLSSFFV
VFWVIFFAFVQVFYILLGTKMAEFSTFVTAAETAFDMARGQFKFDDIAMASPVVGPFVFF
VFALVTSVILLNIFVTLIISSFQSVKEDVEKQCNDFEMVSYVGKKFKGFLGLASADLEPE
TSKPPTLEAQISTFPEKVDRLLFYINDMYFDGQLDLSGKRALRALYKAPEPTQAQQAPLQ
APMLDWMEVSDEPLEDSQSAPRRRKKKRF
NT seq
9090 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaatgactgcctccatcggaggaactccaacaaaagctgctcttgcgcggctg
ggactctggattttcgtaatcggagccatcgtagagaatgggaacgccctcaaggatggc
gactgcttgcgctcggactcggcgtcgtacttccagctctcacccgggggctacgacccg
accaaaggcatggacggcggccgctgccagaacctgtgcgcctccatatcggcgccttat
tcgggcatacagtccaaccggtactgtctctgctccgacgacccattcgcggagcgtctg
acggccaccaagaaggatgtgtgcgacaaaggcgagcagctgtcgacacgcttcttccac
tcggacctcttctcgcccatcgagggtcttcgcgtgatgccctcagcctcggtggtgaac
gtcggcgaggaagtcactttgcacctggctgtcaagtccggccgcaacgccaccgtgctc
ttcaacttcggcgaaggtttacccggcacgcgggggacgctgagcaccgaaccccggtac
atctactggaggcccggcacgtacaagattgtcgtgctggccactcccgtcggtgcctcg
gacctgtacacggttcgggcggaggccatggtggtggtgaccacagctcccgacgaggac
tcggtgcactggaactgccccgcgctggtggagcctggggccggtttcacttgccacctg
agcgtgagcgcgggcgccgacatgaccgctgatgttgaccctggcgatggttcacgacgc
caggtcatgaaactgcccgatgtggtgcccgtgctgatgggagagccggtgccccagttc
cagatggaggagattgtggcggacgaggacgactctgccgactcaggcgtgctgccgatg
gcacgaaccgcgcactcgggtcagattgatgtcatccacggatacggaagtgttccagga
aaaatggacatactgctcctgcgtcccacgtgccaaggctgcacgttcctgggcaacaac
gtcacctgccacgagggggcctcactgtgctcgcaggaagccaactgtctgcgcaacgac
cagtgtcccaagaatcaggtctactccatctacaagatggtcgaaaccatttccatcatg
gtcaacaagggctacttcgtgcaacgcctgtccagcccagtgcccatagtcgctggcgac
atcctgggcttcacaacttcgggtggacgcttggcgtaccgggtccacccacagggcgag
ccctcggacctggtcaaacggaaccagcttaaaggccaggccgtccgcaccgatgacctg
ctggagatggggcggcgatacctcgtcggtgcgctcttctcctcttcggtcaacctcacc
tacgactacctctacgtggagcccggcgcgtacgagttcaggatcagcctgcagaacagg
caccacgacacaaccgtacgcaagatggccgatgtgagcagtcaagagaaactgaccagc
ttccgtctggaggtttccaggaaccaagtgccgacggggaccgaagtcgagattactgca
cgcatgtttggaggaagtgacgtcacgatggtgtggaattttggtgatggtcaaaccact
agggaagtagtgaaaagcgtcctagctggacagcgtttcctgaagaagcacgtcttcaag
gaccccggcacgtacgtggtgcaggtgaattcgtccaacctgcacgggaacttcatcgcc
cgccgaagcatctccgtccagaggcccgtcaccgaggcgtgggagctcttcacgaactct
ccagttatcctaccggaggccatctacctgaccttgacctatcccaagacagagaagctg
ccgacagacgccgtggcgcgaatatctttcggagaccggcagaagaccaagtggaaagtg
cccagcgagtccgcggaaaaagtgtcgcagaagttcagtcacgtgtacctgcggcctggc
tactacaacgtcgccgtcaacatctccaacctcatatcacactacgttctcaccaccagg
gtggaaacagccactcgcacaacgggtctcgtggccaaggtccagttccagcccacggac
gacgctccgctgcgggtgggtctcggctcggccaacgacattttcccaaccacgcggccg
gtggtcttcaccgtcaagacgggaactggcattgtggagatgttcatcatcgagactgcc
aagggacaactccttgccaacggcactggcaagcagctgaagtacacgctcaactttcct
gagcccggccaaaatgacgtgtttgtgtacgcctggaaccacgtccaacagaggacagat
ccattcgtcgtcagtttccgcagcatggagcccatcgaaggactggatgtgtacatgaat
cagacaacaccgaaggacgagcacatccgcaacttcatggtcaccttcgacctgatgggc
accgacacgtgcgtcgtggtggactacggcgacgagtcgcccaagcgcgcctacggctcc
cgctcccagtgcttcacgcgctaccggcccgagcagttccagctggaaggggagctggag
gacccgctctggctgcagaacgtgtacgagcgcggattcgactacgtattcacgctgacc
gccttcaacgacatcagcgagcagacgagcgtgctcaacttcaccgtcaacaacgaaccc
tgcaagccgcccatcatcaagatccgcaaccaggtgctggaccccgaaaacgccaccata
ttttacagattgcgcccagtcgagctgtacaccttgacgtcggtcgagtgcaacatctcg
attgacgtaacgcgagcctgggaggcgttcctgctgaacgagacgggcgaccccgtgcgg
caggtcgacctcgccacgctcgactcgcgcacaaagtccatgatcttcctgcccgaattc
tttctcgaagccggactctacaagctgcgctacaacgtgaacatgagcgcaccgagagcc
aagccacctatgttccacaagcgatttgccgagacctacatagaaatgaagccctcacca
ctgctgcctcaaatgtccaacggagctcagtcgaggataaccagaggctttcctcaaacg
ctcattctgaatccaggcaactactccatcaaccccgatgacccgtccgataagaacttc
agcgtgacgtggttctgccgccgagttccaaacgaggtcatcaaccggactatcccggac
gatgagcagaacgtgaccgagcccctgtaccaccgattacgccacctggagaacatcacg
gccaaaggtcacgacttcgacgtggccggcttcctcgctgacgagaacatggaggaccgg
ggaggatgcttcggcacgggaccaggccgcatcaacatctctggcggagacctcgagtgg
agcaccatcgtgttctacaagcctaacgccacgtacgagatactggcgaaattggagaag
ccggatcgaccgccgtcttggggagccatacaacttgtcctcatggaaaaagtgccacct
tccatcagcgtccagtgccagacggagaagctctgctaccccaacgaccctatcggccag
aagatcaaccccgtacgtgtaggcctcatcgggctctgcatcgaaaactgcgacggggag
atgatctacaactgggaagtattcggcagcgacaatctcacagaggtgtacctggaggat
gccagggactacctagtcggcgccacggagcaaaagatggcgctgtcggacgagttcttc
aaagtgtactaccctacgttcggcgacttcgtggctcggctgacggtgaccaaccagtgg
ggtgtgagcggcatctcggacctgtttctgcacatcaacaagcctcccgaaaacggcatc
tgctccttcgagccacaggaaggacgtgccctcatggacaagttcaaggcctcgtgctcg
gaatggaccgaccccgagggacaggacattgagttttttgccttctgggtgcgcaacgtg
gccaacggggcgttgacattcctgacgtacggtccggacagcgaggtgaccctggtgctg
ccttacggcgagttccaggtgggcgccgacgtcaaggacaaggaaggagccaccacgcgc
gtcaacatgaccaccatattgacgtacctgcccaccaagcaagatttcgagcggtacctt
ggcgagcgttcgctggacaacgcggacgccgccggggaccaggctcgcatgaaccagatg
tcgcaggccatctcgtcccttatgaacgtgcgcctgcccgacgagcttgagaacgagata
aactactcggacccctctgtgctggatcgagagctcgaagagcaggccttgcttcgggcc
aaaatggttcgctcggtgtcctccatcatgaacgtggacacgctgagcagcctggagcag
gttggcagtgccctcaccgccattgcaggagacggaagtggcgtagacaacgagggaaaa
gaagtgatcataaagctgctgaagaagaccgtctctcttgcatccaacctgaaagtggaa
gcaccccagcaacttctcgacttctgcatgtacgccgtcggcaccatgggtggcatcgtg
tcgcgcatgactcagcaactcatctcgggcgtagtgatgcccaccgaccgagccaaggcc
gtcaacattgagtacgacaccgagattgctctggaaggagagcctgaaaaagaaagcctc
ttcgatggaacagttcccatggatgtcgccttagcgagggccgttgtcctcaatgaaaaa
aagcaggccgagcgtcaaatcagcaccatggtggagctgaccgtggatctggtgttggcc
attcttcggaacatcatcgtcggagagaaacccctggagtttcgagctcccagcggtctc
ggtctcaccatatccatgttcagcggcggagcgttgagcggccgcgccattcagcacggc
gatgcggtgtacatctttcccggcatctgtgacgtcctcgccagccggcctacctgcgct
ggcaacgagacacttggcgtcatggctgtgtcgtggccgtcgatcctgcagtccttcggc
ggaggcgtggacgtcctgtccgaggacacgcagacgctgcagttggtcgtcctggacgaa
aacctgtaccgcgtggacgtcagcaacaccacggactacttcgagatcatagtgccgcgc
aaaggcgccaaggaaaacgcaacgggcctgccggagccgacggaattcgcgccgcaagtg
aagtggaacgaggagatggtgtaccaccagttcgtggtgcccaagccggactcggccgtc
aacatcgagatcacgccgcacgatgccagcgcgcagttcctggtctacatcaaacaccgg
gtcaagcctcagctcaacgcgtacgacctcatggtcaacttgtccaccatacgcagcgtg
aatggcacgtatgacatattcctggacaacgctctgattgccaaccgaactggcttcttc
tacctgggcctggtccagccaaacggtagccttccagaattcagcatggaagacccggtc
aacctgaccctgtcggaagtgagcagggagttcagtacaaactactccgtgcgcatctac
acctccggctgttacttcttcaactccaagttgaagatgtggtcagccgacggctgcttc
gtggcgaacgccaactacgcggtgaccaagtgcaagtgcaaccacctgacctcgtttggc
agcggcttcttcgtcatgcccaacacgatcgacttctcgtacgtgttcgccaacgcgggc
ttcgccgacaacgtgaccatctacatgaccgtcgtggtcaccatgctcgtgtacatcatg
ctgctcatatgggcgcgctacgaggacaagaaagacgtcgagaagctcggagcactgcca
cttcaagacaacgatctcaaggacaagtacatttatgaaattgtcgtatttacgggcgac
aagaaaggagcagccactgactccaatgtgttcttcattctttccggggacgatgacgaa
acggaagttcgcactttcggcgaacagaagcgcaagatattccgtaaaggtgctgtggac
acgttcgtcatgacggtgcctcgttctctcggccgtctgaactacatgcgcatctggcac
gacaacggcggcaagggctcgttgcgttcctggcacctgcgcttcatctccgttcgcgac
gtgcagaccaacgcgcgctacgacttcatcgccaacaagtggttcgccgtcgagaaggaa
gacggcctcactgaccgcctgcttcctgtggccggcaaggacgaggcgaccgagttcagc
cacctgttccagctcaagtcccagaagaacctggcagacggccacctctggttcagcgtc
ttcatgcgtccgcccaagagccgcttcacgcgcgtccagcgtgtctcttgctgcgtggcg
cttctctacctctccatgctggtgaacgccatgtggtacggacgcgtgccttccaagccg
tccgcctcttcattcaacgttggccctttctcgctcagcccggaacaggtgggcgtcgga
gtgatggccaacctgatcgtgttcccgcctacgttcctgatgatcacgctcttccggagg
tcgcgcctgaggcgcaagagacccaacaggatcaccgaggcccttcgccagaaaagagac
tcccttgtggtgagccgcgcatcgtcggcggctgccaagccattgggccgtgccggcaag
tccgagtcgacgatgcagctgaccgagacggagctgaacgacgtgttcgaggagcgtccc
cagaggcgtcgcctgcagcaaggccgtcgcaagcgcaagggcaagttcatgttcccctgg
tggtgccgctacgtggcctggttcctctgcctggcctccatattcgtctcgatcttcttc
atctgggcctacggcgtccagtttggcgacgagaagactcgcaagtggatcacctcgctg
ctcgtctccttcttcatgtccgtactcatcacgcagcccatcaaggtgttcatgcttgcc
atcatcttctcgagcctgttcaagtctccggacaaggacgacgacgaagcggaagaggac
gaagaagacccagagctcctcgagcacgaggagtggctgcacagtgatgcgccgaaccac
cggcggcgacggctgtacaagccgcagaacagctgggaactggaccgcgtccgcgaagag
cgcctccgggaactcaagatggcggccattctgcgagagattggcagctacctcttcttc
ctgtggatcctcaccgtgctctcgtacggcaacagagacccgagcgcctacttcctgcag
cagagcctcaggcacgagttcatcgacaacggaaagttcatggagatcagcagcgcccaa
cagttctggaagtggtcgcgggacgtgctggtaccaaacctgaaggccggcccttggtac
aatggtgaccagcccttcggactgcgcggattcctcggtgaccgggtgaaccgtatcatg
ggattcgcatcgctgaggcagatacgcgctcggccccactcctgccgagtggaaaagctg
atgcgtaacctcgtggacgagtgtcgtggacagtcgaacctgctgaacgaggacaagtgg
agctacaagccgggctggaaagaacgggccgacccggacagccccgtggacgagtggcac
caccgccgagccaaggagctgaacggactgcccttctgggggaggctgacggaggtggac
gtgtacggcgggggcggatacgtggtgccgctgcgaggccccaacgacaagatcaaggag
cggctggactacctggagaagtccgactggatcgacggcggcacccgagctgtattcgtc
gagttcagtgtctacaatgcccaggtgaacttgttcggcgtggtgacgatcgtggccgag
ttccatcccggaggcggcgtcatcccgaacgtccgcatcgatgcaatccggttgatgcgc
taccaccagggcttcggcctgttcgtgctgctctgcgagctggtgttcgtcggcttcatc
gtctacttcacgatgcacgagtttcgcaccttcctcaacctcaggatcgactacttccgc
agctactggaacatcgccgaactggtggcgctcgggctctcctactcggccatgttcttc
tacatatcgcgcatggtcgtcaccaacaagatactcaagaccttcgagcgcagtcacggc
aacggctacgtcaagcttcaggtggtggcggccatcgatgagctgttcggctatctgatg
tccttcttgatattcatctgcattctgaagttcaccaagctgttgcgcttcaacaagcgc
atcggcatcctctacagcaccctggcccaatgctccagggacctcagctctttcttcgtc
gttttctgggtcatattcttcgcattcgtgcaggtgttctacattctgttgggaaccaag
atggcggagttctccacctttgtcacggccgccgaaacggcgttcgacatggcgcgaggt
cagttcaaattcgacgacatcgccatggcctctccggtcgtgggaccgttcgtcttcttc
gtcttcgccctggtcacctccgtcatcctgctcaacattttcgtcacgctcatcatcagt
tccttccagtccgtcaaagaggacgtcgagaagcagtgcaacgacttcgagatggtcagc
tatgtgggcaagaagttcaagggattcctggggctggcctcggccgacctcgaacccgag
acctccaagccgcccacactggaggcgcagatcagcactttcccggagaaagtggatcgg
ctccttttctacatcaacgacatgtacttcgatggtcagcttgacctgtccggcaagcgg
gctctgcgagccctgtacaaggcgccggagccgacacaagcacagcaggcacccttgcaa
gcaccgatgctcgactggatggaagtgtctgacgaaccactcgaggactcgcagagcgcc
cctcgacgaaggaagaagaagcgtttctaa
DBGET
integrated database retrieval system
