Rhipicephalus microplus (southern cattle tick): 119179586
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Entry
119179586 CDS
T07403
Symbol
DNAlig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119179586 (DNAlig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119179586 (DNAlig3)
Enzymes [BR:
rmp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
119179586 (DNAlig3)
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
119179586 (DNAlig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
DNA_ligase_A_C
RNA_ligase
LIG3_BRCT
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
119179586
NCBI-ProteinID:
XP_037286596
LinkDB
All DBs
Position
7:complement(2188359..2220660)
Genome browser
AA seq
975 aa
AA seq
DB search
MSETRFCIEYAKRGTAGCKKCKQKIEKQALRIGKIVPNPFSDSGGEMKQWFHVECIFEQL
SRSRATTKKIEDAGDLEGWSEIEPDDRRLVLKHINELSEKTGVAVSPGKRKANNSDGNTP
SKKKKVLTTSTSQGSDDTGEQLDLGDLEASSERTSKTSKDDAFKEFRKLCAAIAEESTYT
GKTAIVARFFKEGCTRKGFTGDLYLWVKFLLPMVNKRVYNLQSKQLVKVFSRIFGNGCHE
EMIEDLEQGDVARTVGTFFEKYGTPASKSMLTMQDVDAYLERLSKLTREDDQMQLLRHLS
ARCTVNDLVMIVRLIKHDIRINSGPKHILEALHPDAYQAFQASRNLEDVVRTSKEGNVSV
SASLMTPMIPMLAEPCGSVDDAFIKCPNGMYAEIKYDGERVQLHKKGSEFLFFSRSLKPV
SAHKVHHLKDFIPKAFKHGHDLVLDSEILMVDTHTQKPLPFGTLGIHKRAAFKDASVCLF
VFDCLHYNGKSLLDRTLRERREILQANMSPIRNHIVFSEQHVITTREKLRDLINDVLSQG
LEGLVLKNPDGVYEPGKRHWLKVKKDYLEGGSMADSADLAVLGAYFGTGSNGGIMSIFLM
GCWNPATGRWCTVTKVHGGHDDKTLERLQTELEMKKISRQMERVPAWLDVEKVLVPDFVA
KDPDTTQVWEIAGAEFTRAEVHTADGISIRFPRVTRIRTDKTPKEATTLPELRKMFQNSR
AKPFDLDLGEDEGSIGNASFASTDKSSSSEKPASPLKNKSSKRSDSPKQTPSLVLKREPE
GSVTNALFSPTDRSASARKNIFSKKFDSSKQTPSLVFKREPTPVKERQEEGALKNIVKAE
ASAEKNNICDFPDVFTGVRMCLPPSRLLRRYFVAYNDSTGNSGLAGLTQGLKLASQGLFS
ESCLSRPRLYWNCKPEKRIPTKAMGDAEADKLRKVSVFFRTKFQSCFKNFYTAEKDVPSD
FVYSSEHKEAIVLIS
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagactcgcttctgcatcgagtacgctaaacgtggcaccgcgggttgcaagaag
tgcaagcaaaagatcgaaaagcaagcgctgcgcatcggcaagatcgtacctaacccgttc
tccgatagcggcggcgaaatgaagcagtggtttcacgtggagtgcatcttcgagcagctg
tcgcggtcccgcgcgaccacaaagaagatagaagacgccggagaccttgaaggttggagc
gagatcgaaccggacgatcgcaggctagtcctgaagcacattaacgaactgtctgaaaaa
actggagtcgccgtaagccctggtaagcgaaaggcaaacaattccgacggtaatacgcct
tctaaaaagaagaaagtgctgacgacttcgacgtctcagggatcagatgacacgggggaa
cagctagacctgggagacctggaggcgtcgtccgagcggacttcgaagaccagcaaggac
gacgccttcaaggagtttcgcaagctgtgcgctgccatcgccgaggagtcgacctacact
ggcaagacggccatagtggcgaggttcttcaaagagggttgtacccgcaagggtttcacg
ggcgacctctacctctgggtcaagttcctccttcccatggtgaacaagcgggtgtacaac
cttcagagcaaacagctcgtcaaggtcttcagccgcatctttggcaacggttgccacgaa
gaaatgatcgaggacctcgaacagggtgacgtggcgcgcacggttggcaccttcttcgag
aagtacggcactccggctagcaagagcatgctcaccatgcaggacgtggacgcctacctg
gaacgtctttcgaaactcacccgagaagacgaccagatgcagctcctgaggcacctgagc
gcccgctgcacggtcaacgacctggtcatgatcgttaggctcatcaagcatgacatacgc
atcaactctggtccgaaacatatcttggaggccctccaccccgacgcgtatcaggccttc
caggcatcccgaaacctggaggacgttgtgaggacctcgaaagaaggcaacgtcagtgtc
tcggccagcctgatgaccccgatgataccgatgctagcggaaccctgcggttcggtggat
gatgcgttcattaagtgtcccaacggcatgtatgccgagatcaagtacgatggcgagcgt
gtacagctacacaagaagggctctgagttcttgttcttcagcagaagcttgaagccagtg
tctgcgcataaggttcaccacctgaaagacttcatacctaaggctttcaagcacggccac
gacttggtccttgacagcgaaatcctcatggtcgacacacacacgcaaaagccgctgccc
tttggaacactgggcatccacaagcgagcagccttcaaggacgcgtccgtatgccttttt
gtctttgactgcctccactacaacggcaagagcctgctggatcggacactgcgtgagcgc
cgggagatcctccaggccaacatgtcgcccatcaggaaccacattgtgttcagtgagcag
catgtgatcacgacgcgtgagaagctgcgagacctcatcaacgacgttctttctcagggc
cttgaaggtcttgtgctcaaaaaccccgatggcgtttatgaaccaggaaagcgacattgg
ctcaaggttaagaaggactaccttgagggtggaagcatggcagattcagcagaccttgca
gtgcttggagcatactttggtactggaagcaacggtggcatcatgtctatctttctgatg
ggctgctggaatccggcaaccggccgctggtgtaccgtcaccaaagtccacggtggccac
gatgacaagacactcgagcgacttcagacggaactggaaatgaagaagatatcacggcag
atggagcgtgtgcctgcgtggcttgatgtcgagaaggtgctggtgccagactttgtcgcc
aaggacccggacacgacacaggtttgggagatagccggtgccgagttcactcgagccgag
gtgcacaccgcggatggtatctcgatccgcttcccgcgggtcacacgcattcggacggat
aagactccaaaggaggcaacgacactaccggagctgcggaagatgttccagaactctagg
gcaaagcccttcgaccttgaccttggcgaagatgaaggcagcatcggaaacgcttcgttc
gcctcgacagacaagtcgtcttcgtcagagaagcccgcttcgccgttgaaaaacaagtct
tcaaaacgatctgactctcccaaacagaccccttcattggttttgaaacgagagcctgaa
ggcagcgtcacgaacgctttgttttcccctaccgacaggtccgcttcggccaggaaaaac
attttttcgaaaaaatttgattcttcaaagcagacaccatcattggttttcaagcgagag
cctacacctgttaaagagcgtcaagaagaaggagcactaaagaatattgtcaaagctgaa
gcatctgcagaaaagaacaatatttgcgactttcccgacgtcttcacaggtgtccgaatg
tgtcttcctccaagcaggctgctaagaaggtacttcgttgcatacaatgactccactggc
aatagcggtttggcgggcctgacccagggtctcaagctggcttcccagggtctgttcagc
gagtcgtgcctctcacgaccacgtctgtattggaactgtaaaccagaaaaaagaatcccg
acaaaagccatgggcgacgccgaagcggataagctgaggaaggtgagcgtttttttcagg
accaagttccagagttgtttcaagaacttctacactgctgaaaaagatgtcccttcagat
tttgtgtactctagtgagcataaagaagccattgttctcatttcataa
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