Rhipicephalus microplus (southern cattle tick): 119179648
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Entry
119179648 CDS
T07403
Name
(RefSeq) aly/REF export factor 2-like
KO
K12881
THO complex subunit 4
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
rmp03015
mRNA surveillance pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119179648
09122 Translation
03013 Nucleocytoplasmic transport
119179648
03015 mRNA surveillance pathway
119179648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
119179648
03041 Spliceosome [BR:
rmp03041
]
119179648
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119179648
TREX complex
119179648
Spliceosome [BR:
rmp03041
]
Complex C
Other components
EJC/TREX
119179648
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119179648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
Btz
Motif
Other DBs
NCBI-GeneID:
119179648
NCBI-ProteinID:
XP_037286662
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All DBs
Position
10:complement(133721998..133727805)
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AA seq
247 aa
AA seq
DB search
MADKIDMSLDDIIKMNRSQFRTTRGRGRGRGRGGVAGRGGARGFGGAVRRGTLRGRARQQ
PYARSFTQAKELPDRWQHDMYDGVGGRRAVTGGLGGAGMGPSKLLVSNLDYGVSDADIKE
LFAEFGPLRKAAVHYDRSGRSLGTADVVFERRTDAVRAMKQYNGVPLDGRPMNIQLVTSA
VGAAALSPASRLGYAATGGGGAASQRPRGGFRGRGRGRGGRGGNVQRKVPTAEELDAELD
AYVNKME
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatcgacatgtccttggacgacatcatcaagatgaaccgcagccaattc
cggaccactcgaggccgtggcagaggccgcggtcgaggcggcgtcgctggacgcggcggg
gcacgtggatttggaggagccgttcgaaggggcacactcagaggacgcgcccgtcaacag
ccctatgcaaggagcttcacacaagccaaagagcttccagaccggtggcaacacgacatg
tatgacggagtgggcggccgacgtgctgtgactggcggcctcggaggtgctggcatgggc
ccctccaagctgctagtctccaatctggactacggggtgtccgacgctgacatcaaggag
ttgttcgctgagtttggacctctgaggaaggcggctgtgcattacgaccgttcgggccgt
tcgctgggcactgcagatgttgtcttcgaacgacgcacagacgccgttcgggcaatgaag
cagtacaacggcgtgccactcgatggccgacccatgaacatccagctggtcacttcagca
gtcggtgccgctgcactctctccggcgtcacggctcggctatgcagccacaggaggcggt
ggagcagcttcacagcgtcctcgtggaggtttccggggtcgtggcaggggcagaggcggc
cgagggggcaacgtccaacgcaaggttccgaccgcggaagaactggacgcagagctcgac
gcatacgtaaacaagatggagtag
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integrated database retrieval system
