KEGG   Rhipicephalus microplus (southern cattle tick): 119180057
Entry
119180057         CDS       T07403                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
rmp  Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03030  DNA replication
rmp03410  Base excision repair
rmp03420  Nucleotide excision repair
rmp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rmp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    119180057
   03410 Base excision repair
    119180057
   03420 Nucleotide excision repair
    119180057
   03430 Mismatch repair
    119180057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rmp03032]
    119180057
   03400 DNA repair and recombination proteins [BR:rmp03400]
    119180057
Enzymes [BR:rmp01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     119180057
    6.5.1.6  DNA ligase (ATP or NAD+)
     119180057
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     119180057
DNA replication proteins [BR:rmp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    119180057
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     119180057
DNA repair and recombination proteins [BR:rmp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     119180057
   NER (nucleotide excision repair)
    Other NER factors
     119180057
   MMR (mismatch excision repair)
    Other MMR factors
     119180057
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 119180057
NCBI-ProteinID: XP_037287088
LinkDB
Position
10:120041437..120082824
AA seq 895 aa
MITDSDEEEETDQKKAVPDKNEELAVRSNSKSLSPPANPKEPVRGKRKTEETNQKKAVPD
RNEELAIPSSSKASPPPVESEEPVAAKRKTARKSAKRSPEPNRLSTESDAKRVKTEPTSE
KEPSSQEPSSPAENKKVKTEPPASPKQEEMETDSKPESDEEVEVKKEKGKKDKEKKEEKG
KKKKVDDKKATKASPPVKKEVKEEKPSAMSKSSPPKDEKAKEKPKAEKKLQNFAFTTSGK
SDQKSSAASQVCDYNPDKANYDPVEDACWKKGAKVPYLALAITLDKIDGISGRLRIIEVL
SNFLRSVLTLSPDDLLSAVYLCLNKIAPDYEGLELGIGESLLVKALAEATGRTPDKVRAE
AAAKGDLGLVAESSRSQQRVLFPPPPLMLSHVFTKLRTIAEMTGNSVQQKKVDIIKVLLV
ACRQCEARFLVRSLGGKLRVGLAEASLLTALAHAAALSPPHGDPKASKKRLEEAALLLKT
AYCECPDYERIINALLEEGVDSLPERCRLSPGIPLKPMLAHPTKAISEVLNRFEGSAFTC
EFKYDGERAQIHLLEDGSVRIYSRNQEDNTGKYPEVVSRIRAAISPDTKTCILDSEAVAW
DRPSQTILPFQTLSTRKRKETTEEEVKVQVCVFAFDLLYHNGESLVKEPLRKRRELLRET
LVEVPGETQLARSADLSTVEDIQEFLQESIKGSCEGLMVKSLDAGATYEIAKRSHNWLKL
KKDYLDGVGDSVDAVVLGGYHGKGKRTGTFGCFLLGCYDPDNEEFQTLCKIGTGFSEEQL
DQHSSFFKEHIIPAPKSYYRFDSSLAPDAWFEPCQVWEIKSADLSVSPVHKAALGLVDPE
KGISLRFPRFIRIRDDKNPEDATSAQQVADLYNKQDHIKNKKAAVQETTADEDFY
NT seq 2688 nt   +upstreamnt  +downstreamnt
atgatcactgacagcgatgaggaagaggagacggaccagaagaaagcggtgccagacaaa
aacgaggagctggctgttcggtcaaacagcaagtctttgtcgccccctgccaaccccaag
gaaccggtcagggggaagcggaaaacagaggagacgaaccagaagaaagcggtgccggac
agaaatgaggagctggctattccatcaagcagcaaggcttcgccgccacctgtagagtcc
gaggaaccggtcgccgcgaagcggaaaacagctcgcaagtcagccaagcgaagccctgag
cccaatcggttgtcgaccgagtcggacgccaagcgagtaaaaactgagccgacttcagag
aaagagccatcgtcacaggaaccatcttctccagcagagaacaagaaagtcaaaactgaa
ccacctgcttcgcctaaacaggaggagatggagacagactccaaacctgaatcagatgaa
gaagttgaggtgaagaaagaaaaaggaaagaaagacaaagaaaagaaagaagaaaagggc
aagaaaaaaaaagtggacgacaaaaaagcaacgaaagcctcgccaccagtgaagaaggaa
gttaaggaagagaagccatctgcgatgtccaagtcatcgccaccgaaggacgagaaagct
aaagaaaaaccgaaggctgagaagaagctccaaaatttcgccttcaccacgtctggaaag
tccgaccagaagtcgtctgccgccagccaagtgtgcgattacaaccctgacaaggctaat
tatgaccctgtggaagatgcctgctggaaaaagggtgccaaagtgccgtaccttgccctt
gccatcaccttggacaagatcgacggcatctcaggcagacttcgcatcattgaggtgtta
agcaacttcctccgatcggttttaaccctctcacccgacgacctgctgagtgctgtctac
ctctgcctcaacaagatcgcacccgactacgaaggccttgagcttggcatcggcgagtcg
ctgcttgtcaaggcacttgccgaggccaccggccgcaccccggacaaagtgcgagccgaa
gccgcggctaaaggtgacttgggcttagttgcagagagcagccgcagccaacaacgggtg
ctgttccctccgccgccgctgatgctgtcgcacgtgttcaccaagctgcgaaccatcgct
gaaatgacgggaaattcggtgcagcagaagaaggtcgacataatcaaggtccttctcgtc
gcgtgccgccagtgtgaggcgcggttcctggtgcgctcgctcggcggcaaactgcgcgtg
ggcctggccgaggcgtcgctgctgacagccctggctcacgcggccgcactctcaccgcct
cacggggatcccaaggcgtccaagaagcgcctcgaggaagcggctctgcttctcaagacg
gcttattgcgaatgtcccgactatgagcgcatcatcaatgccctgcttgaagagggtgtc
gactcgctccccgaacgttgccgcttgagtcccggcattccactcaagccgatgttggcc
cacccgacaaaggccatctcagaggtgctcaatcggttcgaagggtcggccttcacgtgc
gagttcaagtacgacggtgagcgtgctcagatccatcttctggaagatgggagtgtgcgc
atctacagccgcaaccaggaggacaacacgggcaagtaccccgaggtggtgtcacgcatt
cgcgcggccatctcacccgacaccaagacctgcatcttggacagtgaggcagtcgcctgg
gaccgcccctcccagaccatcctgccgttccagacattgagcactcgcaagcgaaaggaa
acgaccgaggaagaggtgaaggtgcaggtgtgcgtcttcgctttcgacctcctctaccac
aatggtgaatcgctggtcaaggagcccctaagaaagaggagggagctcctccgcgagacc
ctcgtcgaggtgcccggcgagacgcagctggcgcggtcggctgatttatcgacggtcgag
gacattcaggagttcctccaagagtcgatcaaaggcagctgcgagggcctcatggtcaag
tccttggatgctggggctacgtacgaaatcgccaagcgctcccacaactggctaaagttg
aaaaaggactacctagatggcgtcggggatagtgtggacgctgtagtactcggtggctac
cacggcaaggggaagcggacgggcacatttggctgcttcctgctcggctgctacgacccc
gacaacgaggagttccagacgctctgcaaaattggcaccgggttcagtgaggagcaactg
gaccagcattcgtcgttcttcaaggagcacataatcccggcgcccaagtcgtactaccgc
ttcgacagcagcctggcaccggacgcatggttcgaaccctgtcaggtgtgggagatcaag
agcgccgacctctccgtgtcgcccgttcacaaggcggcccttggattggttgaccctgag
aagggcatttctctgcggtttccccggttcattaggattagagacgacaagaatccagag
gacgccacttccgcgcaacaggtggcagacttgtacaacaagcaggaccacatcaagaac
aaaaaggcggccgtccaagaaaccacagccgacgaagacttttactaa

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