Rhipicephalus microplus (southern cattle tick): 119180324
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Entry
119180324 CDS
T07403
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119180324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119180324
03009 Ribosome biogenesis [BR:
rmp03009
]
119180324
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119180324
Spliceosome [BR:
rmp03041
]
Complex A
U1 snRNP components
U1 related factors
119180324
Complex B
119180324
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119180324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119180324
NCBI-ProteinID:
XP_037287398
LinkDB
All DBs
Position
10:109890154..109906111
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AA seq
539 aa
AA seq
DB search
MNGRGGRGRDFGSSWGGGDRRGGGGSGSYRNSQPGGSLRKPDWDRIQLQPFQKNFYHEHP
NTANRSPQEVDAYRQANEITVKGREVPKPILHFEEGNFPDYILKAIQAQNYTTPTCIQAQ
GWPIALSGKDFVGIAQTGSGKTLGYILPAIVHINHQPYLQRGDGPIALVLAPTRELAQQI
QQVASDFGKYSRVRSTCVFGGAPKGPQLRDIERGSEICIATPGRLIDFLEAGKISLRRCT
YLVLDEADRMLDMGFEPQIRKIVEQIRPDCQTLMWSATWPKEVRSLAEDFLKDYIQINIG
ALQLCANHRILQIIDVCQETEKEDKLMKLHQEILNEKENKTIVFAETKRKVDDLTRKMRR
YGWPAICIHGDKTQQERDWVLNEFRSGRAPILVATDVAARGLDVDDVRFVINFDYPNCSE
DYIHRIGRTARSNKTGTAYTFFTPNNSRQAKELISVLQEANQVVNPKLYEIANNSRGGGW
GGRGSRWRTGGGGGSSWRNSGGGNGSNTHTHFASGANSVSLGSRDMNGYGHQQNSYYSV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaacggacgcggcggcagaggtagggactttggcagcagctggggaggcggggacagg
aggggcggtggcggctcgggcagctaccgcaatagccagcccggtggcagcctgcgtaag
ccggactgggaccgcatccagctgcagcccttccagaagaacttctaccacgagcacccg
aacacagccaaccggtctccccaggaagtggacgcttatcggcaagccaacgagatcaca
gtcaagggccgcgaggtgcccaagcccattcttcacttcgaggagggcaacttccccgac
tacatcctcaaggctatccaggcacagaactacaccacgccgacctgcatccaagcccag
gggtggcccatagctctcagtggcaaggacttcgtgggcatcgcccagactgggtcgggc
aagacgctcggctacatcctcccggccattgtgcacatcaaccaccagccatatctgcag
cgtggtgacggccccattgctctggttcttgcaccgacgcgtgagctcgcccaacagatc
cagcaggtcgcctcggacttcggcaagtactcccgggtgcgcagtacatgcgtatttggt
ggtgcgccgaagggaccccagctcagggatatcgaaagaggctccgagatctgcattgcc
acgcccggccgcctgatagacttcctggaagcgggcaagataagccttcgtcgctgcacg
tacctggtgctggacgaggctgaccgcatgctggacatgggcttcgagccacagattcgc
aagattgtggagcagatccgtccggactgtcagaccctgatgtggagtgccacctggccc
aaggaggtccgctccttggctgaggacttcctcaaggactacatccagatcaacattggg
gcgttgcagctgtgcgccaaccaccgcattctgcagataatcgatgtctgccaggagact
gaaaaggaagacaagctcatgaaattgcatcaagaaattctcaatgaaaaggaaaacaag
accatcgtgtttgccgagacaaagaggaaagtcgacgacctgaccaggaagatgcgccgc
tacgggtggccagccatctgcattcacggggacaagactcagcaggagcgtgactgggtg
ctcaatgagttccgatctggaagggcacccatccttgttgcaacagacgtggctgcgcgt
ggtctcgatgtggacgacgtgcggttcgtgatcaactttgactaccccaactgctcggag
gactacattcaccggattggccggactgcgcgttccaacaagactggcactgcctacacc
ttcttcacgcccaacaacagtcggcaggccaaggagctcatctctgtcctccaggaggcc
aaccaggtcgtcaaccccaaactctacgagatcgccaataactcccgaggtggcggatgg
ggaggccgtggaagccgctggcgcacgggcggcggcggcggcagctcgtggaggaactcg
ggaggtggcaatggcagtaacacccacacacacttcgccagcggcgccaacagcgtctca
ctcggatccagagacatgaacggctacggccaccaacagaacagttactactctgtctag
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