Rhipicephalus microplus (southern cattle tick): 119180775
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Entry
119180775 CDS
T07403
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119180775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmp03009
]
119180775
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119180775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
NBCH_WD40
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_EIPR1
WDR54
Beta-prop_Vps41
KNTC1_N
Beta-prop_DCAF4
Beta-prop_NWD2_C
Cytochrom_D1
WD40_like
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
119180775
NCBI-ProteinID:
XP_037287808
LinkDB
All DBs
Position
11:117586856..117588483
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AA seq
511 aa
AA seq
DB search
MADFRGVQVFSYPRAGVKVTEDNVYWKRLSLPVTIKDIGAINNVDISLQEPHAFAITCSS
RVRVFNPVSREITCQFSKFSKAACGGVFRADGNLIAAGGEDGAVKLFDVKTRSLLRQFTG
HKNPTQRVAFTRDGRQLLSFSDDSTVALWDIPGQTRLLSLDAHEDYVRCGSVCKANQDIV
LSGSYDHTAKVFDLRTADPVVTVNHGSPVESVLMFPTGGIFLTAGGPHIRVWDVVAGRIL
AQMTQHHKTVTCLKLASNGQRLLSGSLDRHIKVFDVATYQVVHTLDYPSPILSLDISPQD
KVLVVGMISGLISVQRKKSEIAKEVSPAKRRRTSSYFQEAHADPAFVPGEGDAVVPERTS
QKMAKYNTYLRKFEVSKALTQALRDAKFTREPQIAVAVMQELIRRRALKSALAGRSGKDL
DELMLFVTKNVTDPRFSRIMLDVASLMVEVYYPEVTTCKETFRRLKILQKVMHLEAKHMQ
EMMELKGTIEILLSNSSSIVQKETAPNLNEL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggactttagaggtgtgcaagttttttcatatccacgtgcgggcgttaaagtaacc
gaagacaatgtgtactggaaacggctttcgcttccggtaaccatcaaggacataggagcc
atcaacaacgtcgacatttcgctccaagaaccgcacgccttcgcaataacgtgttcttca
agggtgcgcgtgttcaatcccgtcagccgcgagatcacatgccagttctcgaagttctcc
aaggcggcatgcggtggcgtgtttcgcgccgacggcaacctcatcgccgccggaggagaa
gacggcgccgtcaagctcttcgatgtcaagacgaggtcactgttgcgacagttcacaggc
cacaaaaaccccacgcagcgggtcgccttcactcgggacggcaggcagctgctcagtttc
tcggacgactccaccgtcgccctgtgggacatcccgggccagaccaggctgctctccctc
gacgcgcacgaagactacgtgcgctgcggctccgtgtgcaaggccaaccaggacatagtg
ctatccggctcgtacgaccacaccgccaaggtgttcgacctgaggaccgctgaccccgtg
gtcaccgtcaaccacggctcccccgtcgagtcggtgctcatgttccccacggggggcatc
ttcctcacggcggggggaccgcacatcagagtgtgggacgtagtggccggtcgcatactg
gcccagatgacgcagcaccacaagaccgtcacgtgcctgaagctcgccagtaacggacag
cgcctgctctcgggctcgcttgatcgacacatcaaggtgttcgacgtcgctacctaccaa
gtggtccacaccctcgactacccgtctcccatcttgtctctggacatatcgccacaggac
aaagtcctcgttgtcggcatgatatcgggcctcatatccgtgcagagaaagaagagcgaa
atcgccaaagaagtctccccagcaaagcgcaggcggacgtcttcttacttccaggaggcc
cacgccgatcccgccttcgttcccggcgaaggcgacgccgtagttcccgagcgaacctcg
cagaaaatggccaagtacaacacgtacctgaggaagttcgaagtctcgaaggcgctcacc
caagccttgcgggacgccaagttcaccagggagccgcagattgccgtggccgtcatgcag
gagctcattcggaggcgagccttgaagtctgccctcgccggcaggtcggggaaagacctg
gacgaactgatgcttttcgtaacgaaaaacgtcaccgaccctcgcttctctagaataatg
ttagacgttgcctcgctcatggttgaagtatattacccagaggtcacaacgtgtaaagag
acatttcgtagactgaagattctgcagaaggtgatgcacctagaggcaaagcacatgcag
gaaatgatggaactgaagggcactattgaaattctcctgtcgaactccagcagcatagtg
cagaaggagacagcacctaatctaaatgagctatag
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