Rhipicephalus microplus (southern cattle tick): 119180807
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Entry
119180807 CDS
T07403
Name
(RefSeq) pre-mRNA-splicing factor 38A-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119180807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119180807
Spliceosome [BR:
rmp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
119180807
Complex C
U4/U6.U5 tri-SnRNP related factors
119180807
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Gene cluster
GFIT
Motif
Pfam:
PRP38
LED_rpt
Motif
Other DBs
NCBI-GeneID:
119180807
NCBI-ProteinID:
XP_037287840
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Position
11:complement(28271098..28333521)
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AA seq
418 aa
AA seq
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MANRTVKDAHSVRGTNPQYLVEKIIRSRIYDSRYWKEECFALTAELLVDKAMELRYIGGV
YGGNVKPAPFLCLLLKMLQIQPEKDIVVEFIRQDEFKYVRALGANYMRLVGSSLDCYKYL
EPLYNDYRKLRRQNRDGVYVIVHMDEFIDELLREERVADIILPRIQKRQVLEESGELEPR
VSALEDDLDDVDSGEDEIEDVPKAPIEQKKETQRHRMSKSQHESSGSKNTSRSTHNRERE
HREKGAPKDHRDVRDQRDFREQRDFREQRDLRDQRDFRDQRDFRDQRDFRDQRDFRDQRD
FRDQRDFRDSREFRDQRDFRDSRDFRADVRGDGRDSRDVRDKDYREHREKEHRDHRDKDY
RDKDYRDKDYREKDKDYREKDKDYRDKDYREKDHRDKDSRDHHSRRHRDQGEKRKSNK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcacggtaaaagatgcgcactccgtgcgcggcacaaacccgcaatattta
gtcgagaaaatcatcagatcgcgcatctatgattctcgatactggaaagaagaatgcttc
gcgcttacagccgaattgctggtcgacaaggcgatggagttacgctacatcggcggtgtt
tacggagggaacgttaagccggcaccgttcctttgcctgctgctcaagatgctgcagatc
caaccggagaaggacatcgttgtcgagttcatccgtcaggatgagttcaaatatgtgcgg
gccctaggtgccaactacatgcgtcttgtgggcagctcactagactgctacaagtacctg
gagcccttgtacaacgactaccgcaagctccggcgtcaaaatcgggacggtgtttatgta
attgtccacatggatgagttcattgacgaacttctgcgagaggagcgtgtggcggacatc
atccttcctcgaattcagaagcggcaagtgctggaggaaagcggggagctggagccacga
gtgagtgcacttgaggacgacctggacgatgttgactcgggcgaagatgaaatcgaagat
gtgcccaaggcacctatcgagcagaaaaaggaaacacagaggcaccgcatgtcgaaatcg
cagcatgagtcatccggcagcaaaaatactagtcgctcgacgcacaacagagaaagagaa
caccgagaaaagggtgctcccaaagatcaccgtgacgtccgagatcagcgcgacttccga
gaacagcgcgacttccgagaacagcgtgacctccgagaccagcgggacttccgagaccag
cgggacttccgagaccagcgggacttccgagaccaacgtgacttccgagaccagcgtgac
ttccgagatcagcgcgatttccgggactccagagagtttcgagatcagagagacttcaga
gattctcgagacttccgggccgatgtacggggggatggtcgagactcccgcgatgttagg
gacaaggactaccgggaacatcgagagaaggagcaccgcgaccacagggacaaggattac
agggacaaagattatcgcgacaaggactaccgagaaaaggataaggactatagggaaaag
gacaaggattacagagacaaagactatcgcgagaaggaccaccgggacaaggacagtcga
gaccaccacagccgccggcaccgtgaccaaggagagaaacgaaaatcgaacaaatga
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