Rhipicephalus microplus (southern cattle tick): 119181230
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Entry
119181230 CDS
T07403
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmp03009
]
119181230
03012 Translation factors [BR:
rmp03012
]
119181230
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119181230
5.6.2.5 RNA 5'-3' helicase
119181230
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Other ribosome biogenesis factors
119181230
Translation factors [BR:
rmp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119181230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
ResIII
Viral_helicase1
nSTAND3
Flavi_DEAD
AAA_22
UvrD-helicase
DEAD
AAA_25
AAA_16
DnaB_C
UvrD_C_2
SLFN-g3_helicase
PhoH
Helicase_RecD
T2SSE
AAA
ABC_tran
NPHP3_N
DAP3
Peptidase_C101
SRP54
Motif
Other DBs
NCBI-GeneID:
119181230
NCBI-ProteinID:
XP_037288308
LinkDB
All DBs
Position
11:12759337..12948594
Genome browser
AA seq
975 aa
AA seq
DB search
MDNPRGSADNVEDCSLDGFVEKHLALLELERQEEVEQNAKLQDKYSLKELQSKGLCITKL
VLDCAHTGLYGRSVCKFRSCHHGAPLPCHGFSNGDIVGVVVASDATREVICSGVVSSVTS
TNITLAFDEGRDTLDADDGRIFNLLKLANDVTYRRLKRTLEKLRKTRETRYCNLIEILFG
TVSSTEAPITTSQKPIEFFNKDLDESQQEAVAFSLKQKELAIIHGPPGTGKTTTLVEVVL
QCSMQGSKVLVCAPSNVAVDNLVERLLCTSLKVVRLGHPARLLPAIARHSLDAILARSDD
FGIIGDIRKEIDGLMFSSAKSKANDKGYQTRGKLSELRKELKDRERRAVGRILANADVVL
STLTTASDDGPLKNLPQGHFQVAIIDECSQALEVACWMALFRAPKCILAGDHLQLPPTIV
SEVAAKGGLEVTLMERAMRLHGEAVVRMLLTQYRMHELIMRWSSDRLYGGRLLAHPSIAA
HLLRDLPGVEDNDDTALPLLLIDTAGCGMVELDTPDDESKGNEGEADLLAIHVKRLVSSG
VPASEIAVISPYNLQVELIRLRLSARHPGLEISSIDGFQGREKEAVVMSFVRSNNTGTVG
FLAEDRRINVAVTRARRHLAVVCDSTTMSRHDFLKSLVDYIGNEGEVRSAREYTSDLELC
SSTLRPTSLREREVNKPANKLKSRLQQQPSQKSQNVHDIVSRQACQQKGAQRSQRTMEKP
TEPSPWEAVVKGFADSAAKQHSLPSSLTAYERRIVHELAEKLGLLHASEGADDQRHIVLK
KPTQQKTQTAAPCPVRERKNSRGAVLKDNADASKPAAATAEGSQGSSNEQTVLACSRVPE
IKMQMQKKKKPTKPLTGDAKQNEEEENFDQLIANIMKLDRTCSFAKCGEKLHTALAGIGG
PCPFCRRGFCFKHALPEEHGCGEEACKQARIAWHRSKGGTMAPSYVKQEKRAQAQKALDK
RLAQMAESRKRQTKK
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggataaccctcgaggcagtgccgacaatgtggaggactgcagcttggacggatttgtg
gagaagcatttggcactcctggaactggagcgacaagaggaagtggaacaaaatgccaag
ctgcaggataagtattcgctcaaggaactccagagcaagggcctctgcatcacgaagcta
gttctggactgcgcccacaccggcttgtacggacggagtgtctgcaaatttcgatcgtgt
caccatggagcgccgctgccctgccacggcttttctaacggtgatattgttggcgtggtg
gtggcaagtgatgcaaccagagaagttatctgctcaggcgtcgtttccagtgtcacatcc
acgaatatcactcttgcatttgacgaaggtcgggacacactcgacgccgacgatggacgc
atcttcaacttgctcaagcttgccaatgacgtcacctacaggaggctaaaaaggacactg
gaaaagctccgtaaaaccagggaaacaaggtattgcaacctcattgagattctgttcggt
acagtgtcttcaactgaagcaccaataacgacctcccagaagcctatcgagtttttcaac
aaggacctggacgaatcacagcaggaggcagtggccttctccctgaagcagaaggagctg
gccattatccacggtccaccagggactggaaagacgacaaccttggtggaagtcgtactc
cagtgttccatgcaaggctcaaaggtgttggtgtgcgccccttcgaacgttgccgttgac
aacctggtggagaggctgctgtgcacgtcattgaaggttgtgcgcctcggtcacccagca
cgccttcttccagccatcgctcggcactccctcgacgccatcttggccagatcagacgac
tttggcatcatcggagacatccgcaaggagatcgacgggctgatgttctcgtctgccaag
agcaaggccaatgacaagggatatcagacacgtggcaagctgtcggagctacgcaaggaa
ctcaaagatcgtgagcgcagggccgtgggtcgtattctcgccaatgccgacgtggtgctg
tctacactgaccacagcctcggacgacggaccactaaagaacctgccccagggccacttc
caagtagccatcattgatgaatgctcacaggccctggaagttgcctgctggatggctctt
tttcgagcacccaagtgcattcttgcgggagaccacctacagttacccccgaccatcgtc
tctgaagtcgcggccaaaggaggcctggaggtgacgctgatggagcgtgctatgcgcctg
cacggcgaggctgtcgttcgtatgctgctgacacagtaccgcatgcacgagctcatcatg
cgctggtcgtctgaccgcctctatggtggacggctgctggcacatccctcgattgcggca
catttgctcagggatcttcctggagtggaagacaacgatgacactgcactgccacttctt
ctcatcgacacggctggttgcggaatggtcgaactggacactccggacgacgagtccaag
ggaaacgaaggggaagctgaccttctggcaattcacgtcaaacggctagtctcgagcggt
gttccagcgtccgaaatcgccgtgatctcaccttataaccttcaggtggagctcatcagg
cttcgactctctgcccggcatcctggcttggagatcagctcgatcgatggtttccagggt
cgtgaaaaggaggccgtagtgatgtcctttgtgcgctccaacaacacaggaactgtcggt
ttccttgccgaggatcggaggatcaatgtggcggtgacgagggcaaggcgccatctggct
gtcgtgtgcgacagcactaccatgtcgaggcatgactttctgaagtcactcgtcgactac
attggcaatgaaggtgaagtgcgaagtgcacgggagtacacatccgacctagagctgtgc
tcatccacactaaggcctaccagcttgcgggagagagaagtgaacaagccagccaacaag
ctcaagtcaaggttacagcagcagccatcgcaaaaatctcaaaatgttcacgacatagtt
tcgaggcaagcctgccagcaaaaaggtgctcaacgctctcaaaggaccatggagaagcca
acagaaccatctccgtgggaagctgtggtcaagggctttgcagactctgcagcaaagcag
cattcacttccgagctcactgactgcctatgagagacgcatagtccatgagcttgctgaa
aaacttggcctgcttcatgccagtgagggtgctgacgaccaacggcacattgtgctaaaa
aaacccactcagcagaaaacacaaactgcagcaccttgccctgtgcgtgagagaaagaac
tcccgtggcgcagtattgaaagacaacgcggatgcttcaaaacctgctgccgccacggca
gaagggtcacaaggctcatccaacgagcagaccgtgttggcatgctcaagagtgccagag
ataaaaatgcagatgcagaaaaagaagaaacctacgaagccactgaccggtgatgcaaag
caaaacgaagaagaagaaaactttgaccaacttattgcaaacattatgaagttggacagg
acgtgctctttcgcgaagtgtggggaaaagctgcacacggcacttgctggcataggtgga
ccgtgtcctttttgcagacgcggattctgtttcaagcacgccttgccggaagagcacggc
tgtggtgaggaagcctgcaaacaggcccggatagcctggcaccgctccaagggaggcacc
atggcaccgagctacgtcaagcaggaaaaaagggcacaagcacagaaggcgctagacaaa
cgactcgcccagatggccgagtctaggaaacggcagacgaaaaagtga
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