Rhipicephalus microplus (southern cattle tick): 119181243
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Entry
119181243 CDS
T07403
Name
(RefSeq) transcription activator BRG1-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119181243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmp03021
]
119181243
03036 Chromosome and associated proteins [BR:
rmp03036
]
119181243
Transcription machinery [BR:
rmp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119181243
Chromosome and associated proteins [BR:
rmp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
119181243
Chromatin remodeling factors
BAF complex
119181243
PBAF complex
119181243
GBAF(ncBAF) complex
119181243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
HSA
BRK
ResIII
HDA2-3
DEAD
QLQ
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
119181243
NCBI-ProteinID:
XP_037288337
LinkDB
All DBs
Position
11:complement(80729070..80791870)
Genome browser
AA seq
1414 aa
AA seq
DB search
MAYKLLARNQPVPDHISMAVHGTGSSQGTPQGSPQPGPPYMHRPPGAPSPSMRPSPQPAP
PMSSGGPPQQYGPSGSQGTGVGVPPAMGPQYNPVAPTSGAAVPPGVPPPPPHGQPPHPMM
GSQGGGAPTPPPQGAGAGPPGGGLPLQQGPRPGCQAPPQNARGSPGTGPPSSMPAMMQMQ
QQKQNRLTPVAKPQGVDPIEILKEKENRLTSRIAHRIEELSKLPANLPEDLRIKAMIELR
ALRLLNFQRQLRAEVVQCMRRDTTLETSLNPKLYKRTKRQSLREARLTEKLEKQQKLEQE
RKRRQKHQEYLAAVLQHGKDFREFHRGVQAKVAKVNKAVATYHANTEREQKKEQERVEKE
RMRRLMAEDEEGYRKLIDQKKDRRLAFLLSQTDEYIHNLTEMVRQHKAEQRRKLREKKKK
KKKKQPGQQEGGAGGAAGGEGGAPGSSDAPMDAMVDESSQHSDLRVNVIETSTGKVIEGK
DAPLASQLDAWLEMHPGFEVAPREASDDEEEGETDDSTESEDEGDDNSQQQQQQQQPVST
PGKAEPDDHVKSVIQAAAAEDDEYKAGGYQNYYNIAHAIREEVREQASLMVNGVLKEYQV
KGLEWLVSLYNNNLNGILADEMGLGKTIQTIAVITYLMEKKRINGPYLIIVPLSTLSNWM
LEFDRWAPSVVKVAYKGSPNLRRQLSQQLRSSKFNVLITTYEYVIKDKAVLAKIRWKYMI
IDEGHRMKNHHCKLTQILNTHYSAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCNTF
EQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVVKCD
MSALQRLLYRHMQTKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPFMFQHIEEAY
AEHIGCTGSIVQGPDLYRVSGKFELLDRILPKLRSKQHRVLLFCQMTTLMTIMEDYLTYR
GYRYLRLDGTTKAEDRGQLLEMFNAKESPYFIFLLSTRAGGLGLNLQAADTVIIFDSDWN
PHQDLQAQDRAHRIGQKNEVRVLRLVTVNSVEERILAAAKYKLNLDEKVIQAGMFDQKST
GSERKQFLQAILTQDENDEEEENEVPDDETINEMIARNEEELELFQKMDIDRRREEARSV
KRKPRLMEEDELPKWLLKDDAEVERLTNEEEEDKLFGRGNRQRKEIDYSDALTDKEWLRA
IEDGNLDEMETRKRSRKSGGNGVPSSSGGERGGKRKSGPSRQIVDDEPVVKKRRGRPPVE
KASPNPPSLTKQMRKLIDIVINYKDSDSRVLSEAFLQLPSKRELPDYYEVIKKPVDLKKI
KARIREHRYRTLDDLEDDFMLLCVNAQTYNVEGSLIYEDSIVLQSVFTSARERLQKDGDL
ALGTDDQDTDEDGAGPSAEHGSEVRPPPLLLLPT
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaagctcctggcacgcaaccagcccgtgccggaccacatcagcatggctgtc
catggcacaggctcctcccaaggcacccctcagggctcgcctcagccaggaccaccgtac
atgcacaggccaccaggagcaccgtcgccttccatgcggccatccccccagcccgcacca
cccatgagttcagggggccccccacagcagtatgggccaagtggcagccagggcaccggt
gtgggcgtaccgccggccatgggtccccagtacaatcccgtggcacccacttccggggct
gccgttcctccgggagtgccgccccctcctccgcacggccagccccctcaccccatgatg
ggatcccaagggggtggggcaccgactcctccaccccagggggccggtgcggggccaccc
gggggagggctgcccctgcagcaaggtccccgtccgggatgccaggcgccgcctcaaaat
gcaaggggtagtcctggaacgggaccaccatcttcgatgcctgctatgatgcagatgcag
cagcagaagcagaaccgcctcacgcccgtggccaagccccagggcgtcgaccccattgag
attctgaaggagaaggagaaccggctgacaagccgcattgcccaccgcatcgaggagctc
tccaagctgccggccaacctgcccgaggacctgcgcatcaaggccatgatcgagctgcgt
gccctgcggctgctcaacttccagcggcagctgcgcgccgaagtggtgcagtgcatgcgg
cgcgacaccaccctcgagacctcgctcaaccccaagctatacaagcgcaccaagcgccag
agcctgcgcgaggcccgcctcaccgagaagcttgagaagcagcagaagctggagcaggag
cgcaagcggcgccagaagcaccaggagtacctggcggccgtgctgcaacatggcaaagac
ttccgcgagttccaccgcggcgtccaggccaaggtagccaaggtgaacaaggcggtggcc
acgtaccacgccaacacggagcgcgagcagaagaaggagcaggagcgcgtcgaaaaagag
cgcatgcggcggctcatggccgaggacgaggaagggtaccgcaagctcatcgaccagaag
aaggaccgacggcttgcctttctgctctcgcagacagacgagtacatccacaacctcacc
gagatggtgcgccagcacaaggccgagcagcggcggaagctgcgcgagaagaagaagaaa
aagaagaagaagcagccgggccagcaggaggggggcgctggaggtgcggccggtggggaa
ggcggcgcacccgggtcgtccgacgcgcccatggatgcgatggtggatgaaagctcacag
cacagtgacctcagggtcaacgtcatcgaaacatcaaccggcaaggtcattgaaggcaag
gatgctccgctggcaagccaacttgacgcatggcttgaaatgcacccaggatttgaagtg
gcgccaagagaagccagtgacgacgaagaagagggcgagaccgatgactccactgagtct
gaggatgagggtgacgacaactcccagcagcaacagcagcagcaacaacctgtcagcaca
ccgggcaaggcggagccggatgaccacgtcaagagcgtgattcaggccgcagctgctgag
gacgacgagtacaaggcgggcggctaccagaactactacaacatagcgcacgccattcgg
gaggaggtccgcgagcaggcctcgctcatggtcaacggggtgctgaaggagtaccaggtc
aaggggctggagtggctcgtctccctctacaacaacaacctcaacggcattttggccgac
gagatgggtctcggcaagaccattcagacaattgctgtcatcacatacctgatggagaag
aagcgtatcaacggaccgtatctcatcattgtgccactttcgacgctgtccaactggatg
ctggagtttgaccggtgggccccgtcggtggtcaaggtggcgtacaagggttcgcccaac
ctgcggcgccagctgtctcagcagctgcgcagcagcaagttcaacgtgctcatcaccacc
tacgagtacgtcatcaaggacaaggcggtgctggccaagatccgctggaagtacatgatc
attgacgagggtcaccgcatgaagaatcaccactgcaagttgactcagatcctcaacacg
cactacagcgctccgcaccgcctgttgctgacgggcacaccgttgcagaacaagctgcct
gaactatgggctctgctgaacttccttttgccgagcatcttcaagagttgcaacacattc
gaacagtggttcaacgctccgtttgcgacgactggtgaaaaggttgaactaaacgaggaa
gagacgatcctgattattcggcgtctccacaaagtcctgcgaccgttcctgctgcggcga
ctcaagaaagaggtcgagtcgcaacttcccgaaaaggtggaatacgtcgtgaagtgcgac
atgtcagcactgcagagactcctgtacagacacatgcaaacgaagggcgtacttcttaca
gatggatctgaaaaggacaagaagggcaagggcggcaccaagacgctgatgaacaccatc
atgcagctgcgcaagatctgcaaccacccattcatgttccaacacattgaggaggcctac
gccgagcacattggttgcactgggagcattgttcaaggacccgacctgtaccgggtgtct
ggcaagtttgagctgttggaccggatacttccgaagctgcgatccaagcagcacagggtg
cttctcttctgtcagatgaccaccctgatgaccatcatggaggactacctcacctacagg
gggtatcggtacctgcgtctcgacggtacaaccaaggcggaagaccgtggtcagttgctg
gaaatgtttaatgccaaggagtctccctatttcattttcctgctgagcacccgggctggt
ggactggggctcaacctgcaggcggcggacacggtcatcatcttcgactcggactggaac
ccccaccaggacctgcaagcacaagatcgagcccatcggattggccagaagaacgaggtg
cgggtgctgcggctcgtgacggtcaactcggtggaggagcgcatcctggctgcggccaag
tacaaactcaacctggacgagaaggtcatccaggccggcatgttcgaccagaagtcgacg
ggctccgagaggaagcagtttctccaggccatcctcacccaggacgagaacgacgaagag
gaagaaaatgaagtgccagatgatgaaaccatcaatgaaatgattgccaggaacgaggaa
gaactagagctttttcagaaaatggacattgaccggagaagagaagaggctcgcagtgtg
aagaggaagcctcgtctgatggaggaagacgaactgcccaagtggctgctcaaggacgac
gccgaggtggagcggctaaccaatgaggaagaggaggacaagctgtttgggcgaggaaac
cggcagcggaaggagatcgactactcggatgcactcaccgacaaggaatggcttcgggcc
attgaggatggtaacctggatgagatggaaacgcgcaagcgctcccgcaagtccggtggc
aatggcgtcccgtcaagctctggcggtgagcgggggggcaagcgcaaaagcggcccttcc
aggcaaattgtggacgacgagcccgtggtgaagaagcgccgtggcaggccacccgtcgag
aaggcctctccgaacccgccctctctgaccaagcagatgcgcaagctcatcgacatagtc
atcaattacaaggacagtgatagccgggtactaagcgaggcctttctgcagctgccatca
aagagggaacttcccgactactacgaagtcatcaagaaacccgtcgatctgaagaaaatc
aaagctcgcatccgtgagcaccggtaccggacgctggatgacctggaggacgacttcatg
ctgctctgtgtcaacgcccagacgtacaacgtggagggctcgctcatctatgaggactcc
atcgtgctgcagtcggtgttcaccagcgcccgcgagcgactacaaaaggacggcgacctc
gccctgggcacggacgaccaggacactgacgaagacggagccggcccgtcggccgagcac
ggctcggaggtgcgaccccctcctctcctgttgctgcccacgtga
DBGET
integrated database retrieval system
