Rhipicephalus microplus (southern cattle tick): 119181645
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Entry
119181645 CDS
T07403
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119181645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119181645
03009 Ribosome biogenesis [BR:
rmp03009
]
119181645
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119181645
Spliceosome [BR:
rmp03041
]
Complex A
U1 snRNP components
U1 related factors
119181645
Complex B
119181645
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119181645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
C2CH-3rd_BIRD-IDD
DHquinase_I
Motif
Other DBs
NCBI-GeneID:
119181645
NCBI-ProteinID:
XP_037288789
LinkDB
All DBs
Position
11:69546177..69547535
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AA seq
344 aa
AA seq
DB search
MYRNSNVGWFLRKPNWKNIQLHQFEKNLYQEHPHTAGRSMAEVEDYRNANSVSVKENDVP
KPILALEESNFLDYLIKAIEAQHDYTSPTCIEAHCWPIALFCRNFLGIAETGSHKALAYV
LPAVIHVSRQPPRQRHEGPIALVVAPTRELAKQIHIVASELGEHAGLGSVCANSVEITVD
VCQEEEKEAKFAELLEDVLKKKTDRAVVFTERRWKVEEIALQLRQRGWPAISLHGKRDKE
EREWVLSLFSSVAETVLVTTDVVVQDAELGKVRMVVNYDCPGCSKVYAHRSRHAQLDNKP
GVVYTFVVPTQHRQADTLVEISDDAKQPISPEFYGIVKNVSLKQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggaacagcaacgtgggatggttccttcgcaagcccaactggaagaacatacag
ctgcaccagttcgagaagaacctgtaccaggaacacccgcacacggcaggccgttcgatg
gccgaagtggaagactacagaaatgccaacagtgtatcggtgaaagagaacgacgtgccg
aaacccatactcgccttggaagagtccaactttctggactacctcatcaaggcaatagag
gcacaacacgactacacgtcaccaacgtgcatcgaggcccactgctggcccatcgcactc
ttttgcaggaactttcttggcatagcggagacgggatcacacaaggcgctcgcctacgtc
cttccggccgtcatacacgtcagccgccagcctccccggcaacggcacgaaggccccatc
gccttagtcgtagctccgacgcgcgaactggccaagcagattcacatcgtggcctcagag
ctcggcgagcacgccgggttgggcagcgtgtgcgccaacagcgtggaaataacagtcgac
gtgtgccaagaagaagagaaagaggcgaaattcgccgaactattggaggacgtcctcaag
aagaagacagacagagccgtggtgttcactgagaggaggtggaaggtcgaggagattgcc
ctccagctgcgacaacgtggctggcccgccataagccttcacggcaagagggacaaagag
gagcgtgaatgggtcttgtcattgtttagcagcgttgcagagacggtgcttgtgacgact
gacgtggttgtgcaggacgcggagttgggaaaagtgcggatggtggtgaactatgactgt
ccgggctgctcgaaagtctacgcgcacaggtcaaggcacgcgcagctcgataacaaaccg
ggcgtggtgtacacgttcgttgttcccacccaacataggcaggccgatactctggtggaa
atttcggacgacgcaaaacaacccatcagtcctgaattctacggaattgtgaaaaatgtt
tctctcaagcagtaa
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