Rhipicephalus microplus (southern cattle tick): 119181676
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Entry
119181676 CDS
T07403
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119181676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119181676
03009 Ribosome biogenesis [BR:
rmp03009
]
119181676
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119181676
Spliceosome [BR:
rmp03041
]
Complex A
U1 snRNP components
U1 related factors
119181676
Complex B
119181676
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119181676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Exo_endo_phos_2
Exo_endo_phos
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
119181676
NCBI-ProteinID:
XP_037288817
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All DBs
Position
11:complement(74402170..74411049)
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AA seq
618 aa
AA seq
DB search
MVLLSTRRSRLTAEAPRGRNSGNNIKARIIRAGRMPQLPREDTEIVIRPRGGLNVVKTGC
TVVADAILAATSTCAEDLRVALRTDRQRFRALIRKEVNLGGPNPLVLAGDFNAPHHTWGS
PYNTSKGVELWQSATDIDLTLITDKAFPTWLGSSSCRDSTPDLTFIKNLPDVHIWLHTFG
VPPPVPKSQVRSALPAPEHDSPSMEQLFYREHFATARRTQAETSEFRSKNNVTVRGRAVP
TPILQLYEANLPECVAEAAACALKHGPLTALQSQCWPVALRGRDLLAISHNRAQANEQAY
LVPAIVRAVHQPSTGNGLVTLILVPTLEVAEKIQRLVADLEMYTGVRSVCLCSGDWKERQ
LKILKKASYGMWIATPSRLLSFLKEGKVKISGCTLLVLDEADRMLAMGFEKTLRSIAAVV
RPDRQTLVLANSASREVGDLADFLLRDHVQVTIGYSKLAENERVEQTVIVCEKPRKLDRL
VTLFEDILKKKDDKVIVFVETRSNVEKTVFELQLRGWSVTGIHGAKTRDERRRAMDAFKS
GLSSILVVTDVAAQQVDVGCVRYVVHYDRPANAGRLREPRELRVALRQIGSGVRLSCSRR
CPSRERARLLPARRRPGG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgctactttcaacgagacgaagtcgactaacggccgaggccccgcgaggccgcaac
agtggcaataacatcaaggctaggatcattcgcgcgggccggatgccccagcttcccagg
gaggataccgagatcgtgattcggccccgcgggggcctcaatgttgtcaagaccggctgc
accgtggtggctgatgcaatcctggcggccacaagcacctgcgccgaagatttgcgggta
gccctaaggaccgatcgacagcgcttcagggccctcataaggaaggaagtcaacctgggg
ggtcccaaccccctggttctggcgggcgatttcaatgctccgcaccacacttggggctcc
ccttacaataccagcaagggcgtggaactgtggcagagcgcgactgacattgacctgact
ctaatcaccgacaaggcctttccaacttggttgggctcttcatcctgcagagactcgact
cccgacttgaccttcatcaagaatctccccgatgtacacatatggctgcacacattcgga
gtgccaccaccggtgcccaagagtcaggtgcggagcgctctgcccgcgccagagcacgat
tctccgtccatggaacaactcttctacagggaacacttcgcgacggcacgacggacgcag
gctgaaacgagcgagttccgaagcaagaacaacgtcaccgtcagaggacgagcagttccg
acgcccattttgcaactttacgaagccaacttgccggaatgcgtcgccgaagctgccgcc
tgcgctctcaaacacggccctctcaccgccttgcagtcgcagtgctggcccgtggcactt
cgcggcagggacctcctcgcgatctcacacaaccgggctcaagcgaacgagcaggcctac
cttgtaccagccatcgtccgcgctgtgcaccagccatctactggcaatggtcttgttacg
ctcatactcgttccgaccctcgaggtggcggagaaaattcaacgtctggttgcggacttg
gagatgtacaccggtgttcgttccgtgtgcctgtgctcgggtgattggaaggaaagacag
ctgaagatacttaagaaggcgagttacgggatgtggatcgcgacgcctagccgtttgcta
tcgttcttgaaggaagggaaggtgaaaattagcggctgtacacttctagtgctggatgaa
gctgaccgcatgttggcgatgggcttcgagaaaacgcttcgctccatcgctgccgtcgtc
cgacctgatcgccagacgctcgtattggcaaactctgcatcgagggaggttggagacctt
gccgatttcttgctcagagaccacgtccaggttaccatcggatacagcaagctggcagag
aacgagagggtcgagcagacagttatcgtatgtgagaaacctcgcaaactggatcggctc
gtcaccttgtttgaggacattctcaaaaaaaaggatgacaaggtcatcgtcttcgtcgag
actaggtcaaacgtggaaaagaccgtgtttgaactacagctgcggggctggtctgtcacc
ggcatccacggcgcgaagacgagggacgagcgacggcgggctatggacgcgttcaagtcg
ggtctgtcgagcattctcgtggtgaccgacgttgcagctcagcaggtggacgtcggctgc
gtgcgctacgtcgtccattacgaccgcccggcgaacgcaggacgtctacgtgaaccgcgt
gaactgcgcgtcgcactgcgacagatcgggagtggcgtacgcctttcttgctcccgacga
tgcccgtcacgcgaaagagctcgtcttttacctgcgagacgccggccaggaggttga
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