Rhipicephalus microplus (southern cattle tick): 119181734
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Entry
119181734 CDS
T07403
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119181734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119181734
03009 Ribosome biogenesis [BR:
rmp03009
]
119181734
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119181734
Spliceosome [BR:
rmp03041
]
Complex A
U1 snRNP components
U1 related factors
119181734
Complex B
119181734
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119181734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
MukB
Motif
Other DBs
NCBI-GeneID:
119181734
NCBI-ProteinID:
XP_037288874
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All DBs
Position
11:85857873..85859432
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AA seq
519 aa
AA seq
DB search
MFGGFGANVNGPNEGPPDAVFPFGRGQFVIFEQVPMGRGRGLPLQPPVSGDNHTALFTVR
NRSAYVAAKSQVGRSLRPPNWKGIRVPTYQKNFYREHIRTAWRAPEEVEAYRNANEIIVT
GRGALKPVLHVDEAGLPESVTKAVEKLNTDPPPTALQAECWPVALSGRDLVAFDATASKG
KFLAYLVPALVHVQHQPAGQVGGGPMVLVLTATREIAEQVFADARKLTEGSKIRTVCLVS
GNPKQPQVKQLQEGADICIATPGRLTVLMDEHRVNLSRCTLLVLDEANRMLAVGLGKNLR
TIVDNIRPDRQTLVMLACVTRESRELAEELTKDCIDVSIGAATLSHNDHRVEHVVFVCEE
AEKEDKLFALLNDILNDERGRVVVFAETKQTVEYLAVTLCNLGCPTIGVHGKKSKKEHKR
ALDTFHLGRTAVLVATDMVARAMELQNVSCVVSYDYPSNSGEYLRRFRHAARPDGTGKKY
TFLAPNEGVHAREMMCFLRQNKQPIPPQLLVVANKVARK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggggctttggagcaaatgtcaatggacccaacgaagggcccccagatgcagtc
ttcccgttcggccgcggacagttcgtcatcttcgaacaagtaccgatgggcagaggccgc
ggccttcctctgcagccgccagtaagcggagacaatcacacggcgttgtttaccgttcga
aacaggtcagcctacgttgcggcaaaaagccaggtgggacgcagcctgcgcccacccaat
tggaaaggcattcgggtgccgacttaccagaaaaatttctaccgtgaacacattaggaca
gcgtggagagctcccgaagaagtggaggcctatcgtaacgccaacgagattatcgtcacg
ggacgcggtgctctcaagccagtcttgcacgtggatgaagccggactcccagaatctgta
acgaaggcagtcgagaaactcaacactgatccgccaccgaccgcattgcaagccgagtgc
tggcccgtagcactcagtggcagggacctggtggccttcgacgccacagcctcgaaaggg
aagtttctggcctaccttgtcccagccctcgtccacgtacaacatcagccagccgggcag
gttggtggcggacctatggtgctcgtgctgacagcgacgagggagatcgccgagcaagtt
ttcgccgatgctcgcaagcttaccgagggatccaagattcgaaccgtgtgtctcgtttcg
ggaaacccgaagcagccgcaggtaaaacagctgcaggaaggtgctgatatctgtattgca
actcctggccgtcttacggtcctcatggacgagcacagggtcaacctgagtcgttgtacg
ctcttggttttagacgaagcgaaccgcatgcttgctgttggcctagggaagaatcttcgc
acaattgtggacaacatccgaccggaccgccagaccctcgtcatgctggcgtgcgtaacg
agagagtcgcgggagcttgctgaagagttgacaaaggattgcatcgacgtgagcatcggg
gcggcgaccctgtcgcataacgaccaccgcgtagaacatgtagtcttcgtttgtgaagaa
gccgagaaggaggacaagctcttcgccctgttgaacgacatcctcaacgacgagaggggc
agggtcgtcgtattcgccgagacgaagcagacagtagaatatttggcggtaaccttgtgc
aatctgggctgcccgaccatcggcgtccacgggaagaagtcgaagaaagaacacaaaagg
gctttggacaccttccatttgggcagaactgccgtcctggtggcgaccgacatggtagcg
agggcgatggagcttcagaacgttagctgcgtcgtcagctacgattacccgagcaattcg
ggtgaatacctgcgtcgcttcaggcatgcggctcggcccgacggcacgggcaagaagtac
acgttcttggcgccgaacgaaggcgtacacgccagggagatgatgtgtttcctccgacaa
aacaaacagcctattccaccgcagctacttgtggtcgcgaataaggtggcacgaaaatag
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