Rhipicephalus microplus (southern cattle tick): 119181799
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Entry
119181799 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 1-like
KO
K06225
patched 1
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
TubC_N
Motif
Other DBs
NCBI-GeneID:
119181799
NCBI-ProteinID:
XP_037288940
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All DBs
Position
11:102409990..102434475
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AA seq
1268 aa
AA seq
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MSPRPSSSYCRRHDLGLLTRTSWTDARTAVRQIEKGRASGGRWSLLLRGQLQGQLVQLGR
FIDRNAGKVLFVGLLVLATFCVGLKSAHLETDVHNLWVQRGGRLEREQAYVRSTLGEGAG
TSSQLVIQTAPPAGDLLRRPEALLSHLDALSRATQVTVDMFELTWRLKDLCYAPSFPTFD
ESYVDDMLEKLLPCIIVTPLDCFWEGSKLLGPEIPAHIPILGFGVQWTDLNPQRLVGEIQ
KVATFGGSFPFDTIQDFMRRAGITSAYQEKPCLDPSDPRCPETAPNKRSGRAPDIGAQLT
GGCYGFATKYMHWPEDLIVGGVQKNRSGHIVRAEALQSVVQLMAERDMYHYWKGHYRMAH
LDWTMDKARSILEAWQRKFAEEILRQDASFEYRNTTRRPIGDLHVFTATSLADVMKDFSQ
VSPVRVALGCLLMVAYGCISLWAAAARDNPWGSAILGTLGVLLSVAAVGAGLGLCALLGL
PFNAATTQVLPSLALGLALDTLFLLDQAYRQGARSRPPYERTAQVLKCVGPSVLLAWAGT
AGAFCAAALIPVPALRAFVLQAAVLHTFGTATMLLLFPAAVSVDLRRSRHSWQQCCSGLA
SSIHCKTSDSGSSWAHGNLGGGRLDYFASHYYAPMLQQTPVKVLTVLGLVALLAASGWGA
LRADEGLDLAEVVPGGSREQAFLKAQSHYFGFFHIFAITRGNFEYPTKQKLLLEFHEAFT
SIEHIIKNDDGGLPDFWLTLFRDWLRGLQKAFDRDWERGCITREQWFPNASDEGVLAYKL
LVQTGRPDNPIDKKLIPKGRLVDDEGIVNPKGFYNYLSAWASNDALAYSASEANLRPEPR
QWIHSRQEVELRVPKSAPLAYAQMPFYLRGLRNSGEVSRALESVWALCARFEARGLPNFP
RGAPFAFWEQHLGFRIHLMAALALALAAVFLVLALALLNLWAACFLVLVLGSFVLELFGA
MGFLGVRLSAIPAVLLVLAVGIGVQFTVHVTISFLTAIGSRGRRVSLSLEWMFTPIVHSA
VSTLLGVLVLASSEFDFIVRHFFYVLSALVILGLLNGLLFLPVLLSLVGPPGELVPQNRG
DRIATPSPEASPEPPQRALRPPRTFGRPVAGPPLGGGGVRRHPWADSLSTISEEPPSYHS
CSSSHEIVLHPEVVVETTTVTTSNGTTETTTRNTVDSGDRSSSAQSSSSSGSGSNSRSST
PSEGSNAPTVVQSSSDCSVQPGGGATTNVTTKVTAKVKVELHAPVHASERSHKHRRRRDS
SCSRDCKF
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgagccccagaccatcatcgtcgtactgcaggagacacgatcttggtcttctgacgcgc
acaagctggacggatgctcgcacagcggttcgccagattgagaagggccgcgccagtggt
ggccgctggtcactgctcttgcgcggccaactccaggggcagcttgtgcagctgggtcgg
ttcatcgaccgcaatgcgggcaaggtgctctttgtcggacttctggtgctcgccacgttt
tgtgtgggcctcaagtcagcccaccttgagacggacgttcacaacttgtgggtgcaacgc
ggtggacggctggagcgcgagcaagcatatgtgcggtcgacgctgggtgagggtgcgggc
accagtagccagctcgtgattcagacagcgcccccggctggcgatctcctgaggaggccc
gaagcactgctgtcccacctcgatgccctctcccgggccacccaagtcactgtggacatg
ttcgagctcacctggcggctcaaggacctgtgctacgctcctagcttccccactttcgac
gagagctacgtggacgacatgctcgaaaagcttttaccctgcatcatcgtgacacccctc
gactgcttctgggaagggtccaagctccttgggcccgagattccggctcacatcccaatt
ctaggttttggcgtacaatggacagatctgaacccacagcgtttagttggcgagatccag
aaagtggcaacctttggtggatccttcccatttgacaccatccaagacttcatgcggagg
gcgggcatcacgtcggcataccaagagaagccgtgcttggacccgagcgacccccgctgc
ccggaaacggcgcccaacaagcgttcggggcgggcgcccgacatcggtgcacagctgaca
ggtggctgctacggtttcgccacgaagtacatgcactggcccgaagaccttatcgttgga
ggcgttcagaagaaccggtcagggcacattgttcgggcggaagcattgcaatcggtcgtg
cagctgatggcagagcgggacatgtaccactactggaaaggtcactaccggatggctcac
ctcgactggaccatggacaaagcgcggtccatcctcgaggcctggcagcgtaaatttgca
gaggagatcctgcgacaggatgcatcattcgagtaccgcaacactacgcggcggccgatc
ggcgatctgcacgtgtttaccgcgacgtcgctcgcagacgtcatgaaggacttttcgcaa
gtgagcccggttcgtgtggcgcttggctgcctgctgatggtcgcctatggctgcatatcg
ctgtgggccgctgctgcccgcgacaatccctggggcagcgcaatcctgggcactctcgga
gtccttctgtccgtggctgccgtcggggctggcctaggcctctgtgccctgcttggcctg
ccgttcaacgcggccaccactcaggtgctgccatcgctggcgctgggtttggccctggac
acgctgttccttctcgatcaggcttaccggcagggagctaggagtcggcccccgtatgaa
cgcactgcacaggtgctgaaatgcgtcgggccgagcgtgctgttggcgtgggccggtacg
gccggtgcattttgcgcagctgcactgatccccgtgccggcattgcgggcttttgtgctt
caggctgcagtgctgcacacctttggcacggctaccatgctcctcttgtttccagctgca
gtcagcgtagatctcaggcgaagccggcacagctggcaacagtgctgctcaggactcgca
agctcgatccactgcaagaccagcgacagtggtagcagttgggcccatggaaacttgggt
gggggcaggttggactactttgccagccactattatgcaccaatgttgcaacagacaccg
gtgaaagttctgaccgtgctgggcctggtggcactcctggcggcatcaggttggggtgcc
ctgcgtgcggacgaaggcttggacttggccgaagtggtgcctggcggcagtcgcgagcag
gccttcctgaaggcgcagagccactacttcgggttctttcacatctttgccataacgcgg
ggcaacttcgagtacccgacaaagcagaagcttctgctggagtttcacgaggcgttcact
tcgatcgagcacatcatcaagaacgacgatgggggcctgcctgacttctggctcacgctc
ttcagggactggctgcgaggcttgcagaaagcattcgatcgggactgggaacgtggctgt
atcacacgagagcaatggttcccaaacgcttcggacgaaggggtgctcgcctacaagctg
ctcgtgcaaacgggtcggcccgacaatcccatcgacaagaagctgatccccaagggacgc
ctcgtcgatgatgaagggatcgtcaaccccaagggtttctacaactacctctcagcgtgg
gcgtcgaacgatgcactcgcctactcggcctcagaggccaacctccgccccgaaccacgg
cagtggatacactcgaggcaggaggtcgaattgcgcgttcccaagtcggcgccgcttgcc
tacgcccagatgcctttctacctccgtggcctgcgcaacagtggcgaggtgtcgcgagcc
ctcgagagcgtgtgggcgctgtgtgcacgcttcgaggcgcggggactccccaacttccct
cgcggagcacctttcgccttttgggagcagcacctgggcttccggatccatctgatggcg
gctctggccctggctttggctgccgtgtttctggtgctcgcgctggccctcctcaacctc
tgggcggcctgcttcctcgtgctcgtcctcgggagcttcgtcctcgaactttttggtgcg
atgggcttccttggtgtgcggctcagcgccattccagccgtcctcctcgtgctggccgtc
ggcataggtgtacagttcacggtgcacgtgacaatctcgtttctgacggccatcggcagt
cggggccgccgtgtgtcgctgagcctcgaatggatgttcacacccatcgtgcatagtgcg
gtgtcgacgctgttgggtgtgcttgtgctagcgtcgtccgaatttgactttatcgtcagg
cacttcttctatgtgttgtcggccctcgtgattctgggccttctcaatggactgctgttt
ttgccggtgctgctctctctggtgggaccgcctggcgagttggtgcctcaaaatcggggg
gatcgcatagcgacgccgtcgccagaagcgtctcccgagcctccgcagcgagcgctaagg
ccgccacgcacgtttgggcgccccgttgccggtccgccgctcgggggcggaggcgtgcgg
cgtcatccgtgggccgactcgctgagcacgatctccgaagagccaccctcgtaccactcc
tgctcatcctcgcacgagatcgttctgcacccagaggtggttgtcgagactaccacggtg
accacaagcaatgggactacagagacgactacgagaaacacggtagactccggcgaccgg
tcgtcgtcggcgcagagcagcagcagcagtggcagcggttcaaacagccgttcgtcgaca
ccaagcgagggcagcaatgcgccgaccgtggttcagtcgagcagcgactgcagtgtgcag
cctggtggaggggccaccacaaacgtcacgaccaaggtcaccgccaaggtcaaagtggag
ctacacgcacctgttcacgcctccgaacgcagtcacaagcacaggcggcgacgagatagc
agctgctcccgcgactgcaaattctga
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