Rhipicephalus microplus (southern cattle tick): 119181816
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Entry
119181816 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein cut-like
KO
K09313
homeobox protein cut-like
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmp03000
]
119181816
Transcription factors [BR:
rmp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
119181816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
HNF-1_N
HTH_36
ANAPC4
NLRC4_HD2
Motif
Other DBs
NCBI-GeneID:
119181816
NCBI-ProteinID:
XP_037288960
LinkDB
All DBs
Position
1:221431981..221805383
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AA seq
1525 aa
AA seq
DB search
MRPPATEDHSALNDSIPAEDARQTDLTIQQLRDQVGQDSVTLQIPSAERLLELQRQLADK
ERALQESQSQVCLKLHEAEDKISQLESALEHTQCELLKARGKSDTNGSRSDEMEMLMTDL
ERVNQRAVAAEQDSVLLRDQLSDMDSSSPPPPSSARDTASPSRGRXLELQLASKDKEISQ
LVEDIRKLQSAVDSLKETSASQIAQLEGMLAEKSRIIQELEDRLDRQKDYEDIKNELRNL
KMLEDSDNPSDDQDEKPTLVSSNNNNNNCVDLVLYGKNRTRLSPPLPKDDAGSPRSRLQN
VEAFGSLLGEEIVSSFSRMLKSEQPQQPIVSSPPATPKSVDADAMSTGTDTSTGSGRGGP
DEAAGATPPTPDPVIGASLERLQECLRQNMERHACEALNTQNVARAVRELLSAHNVGQRL
FARFVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWASDDFCVFMLKSLVPKKGKE
SGGSSASSRQEDAAAEERIAQILSEAQQAMTIPMSKERSPAPPSSGAQNGAADDPHADSD
QDVDTNNANSTQSADVPXKDAKRSSRKYENDDIPQEMVARIYQEELAKLMGQRVEESFRQ
QQYDRTHEEIRQALSIYHHELSRLSQLALTPGHEFARFGAAALPGALLNGAFPGLSLGPE
LRGGPGAAAAASAAAAAAAAARVAAADSAEAMRAAHEQQQQPPTSQHQRRGGSSLAAQLA
PRDWHKQRGGNKYSSAFSLVRPGVKFPGSGSTPSPPGAAGVLGLSDTPPGGAAPEDLGSS
PLQRMQSITNSLLTQTATPTMPTTNQRQNKAVLPPITQQQFDQYNNLNTEEIVKKVKEQL
SQYSISQRLFGENVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKIFLEDENAVHKLV
ASQYKIAPEKLMRTSGFTAAFQPARYVFQRAAGSSKLPASSAAAARAAAARDLPSHRNSH
CDSASPLLGKSPFSASPELQVALMQQHHQQQQQQQQQQQDSRVAMYAPPSSPTTAARKGH
SHHPSGGGGRSLPYVQPSVYEMAALTTDLDTQTITAKIKETLMAHNIGQKIFGEAVLGLS
QGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDPHNVEKLQVIKNERREANKRRRTHVD
LEAAPRPMEAQPPSLPALTPGAGSFPFAAPSSPFPAAKKPRVLFSDEQKEALRLAFSMDP
YPSTATIEFLANELGLSVRTITNWFHNHRMRLKQHVVSPGPDDNPPRSEPSTLLGPPPGS
REGSASFDPALFRGLLVQRLAEMHGSGGDKSGPSAFGAGAXGALSLNAYNSYSPSSQQGN
DEGTLDLSMSSSQASSGRRTWARGGGTPTEDLDDSNLSQDEPATAGSDRDSLKEESISTP
SPHNSYSSRRRKPAVPKWVDPGLSPDSDDAEDDEAGDAESAIINGVCVRQTVAAGDFGLR
LRETVRVDPVAAADDARKSAERDDLDEDDDEEEETALELCTTAKKPSSGDGMRKTRTEAG
QPWRRTWRGLGVLEHYIPGTQLSHV
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccccccgccactgaagaccacagcgccctgaacgactcgataccggcggaggac
gcccggcagacagatctcacaatccagcagctacgggaccaagtgggccaagacagcgtc
acattacagatcccaagtgcggagcggctgttggaacttcagcggcagttggcggacaag
gagcgggcactgcaggagtcccagtcccaggtctgcctcaagctacacgaggctgaggac
aagatctcacaactcgaaagtgccttggaacacacccagtgtgaactgctgaaagctagg
ggcaaatcggacaccaatggaagccggtccgatgaaatggaaatgctcatgaccgacttg
gaacgtgtaaatcagcgcgccgtggcggccgagcaggattcggtgctgttgcgagaccag
ctgtctgacatggactcctcgtcgccgcctccgccgtcctctgcgagggacaccgcgtcg
ccctcgcggggccgcnngctcgagctgcagctcgcctccaaggacaaggagatatctcaa
ctagtcgaagatattaggaagctgcagtcggcagtggattctctaaaagagacaagtgcc
tcacagattgctcaactcgaaggaatgcttgcagagaagtctagaataatccaagagctt
gaagacaggctggatcgacaaaaagattacgaggacataaagaacgaacttaggaacctc
aagatgctggaagacagcgacaaccccagtgacgaccaggatgagaagcccactttggtg
tcgtccaacaacaacaacaacaactgtgtcgatctcgtgctgtacggcaagaaccggacg
agactttcgccgcctctaccaaaagacgatgcaggttcccctcgcagtcgactgcagaac
gtcgaagcgttcggttcactcctcggcgaggagatcgtctcgtccttttcgcggatgctc
aagagcgagcagccgcagcagccgatcgtctcgagcccgccggcgacgccaaagtccgtg
gacgccgacgccatgtccacgggcaccgacacctcgacgggcagcggccgcggcgggccg
gacgaggcggccggtgccacgccgcccacaccggacccagtgataggagcgtccctggag
cgcctccaggagtgcctgcgccagaacatggagcggcatgcctgcgaggcgctcaacacg
cagaacgtggcgcgcgcggtgcgcgagttgctgagcgcacacaacgtgggccagcgtctg
ttcgcgcgcttcgtgctcggcctgtcgcagggcaccgtgagcgagctgctctccaagccc
aagccctgggacaagcttaccgagaagggccgcgactcgtaccgcaagatgcacgcgtgg
gcctcggacgacttctgcgtcttcatgctcaagtcgctcgttcccaagaaaggcaaggag
tctggcggctccagcgcttcgagccgccaggaggacgcggccgccgaggaacgcatcgcg
cagatcctcagcgaagcccagcaagccatgacgattccgatgagcaaggagcgcagtccg
gcgccgccatcttcaggagcgcagaacggcgctgccgacgatcctcacgctgacagcgac
caggacgtcgacaccaacaacgcgaacagcacgcagtctgcggacgtcccanncaaggac
gcgaaacggtccagccggaagtacgagaacgacgacataccgcaggagatggttgcacgc
atctaccaggaggagttggccaagctcatggggcagcgagtggaagagagcttccggcag
caacagtacgaccgcacgcacgaggagatccgccaggcgctgtccatctaccaccacgag
ttgtcgcggctctcgcagctcgcgctaacgccgggccacgagttcgcgcgcttcggcgcg
gctgctctgcccggggcgctgctgaacggcgccttcccgggcctgtctctgggacccgag
ctgaggggtggtcccggcgcggcagccgccgcttcggccgcggcggcggctgcggcggcg
gcaagggtcgcagccgccgattctgccgaagctatgcgcgcggcgcacgaacagcagcag
caacctccgacgtcgcagcaccagcgtcgaggtggatcttcccttgctgcgcagttggcg
ccgagggactggcacaagcagcgtggtggcaacaaatacagtagcgcattttcgctggtg
cggccgggtgtcaagttcccgggctccggttcgaccccaagtcctccgggcgccgctggc
gttctgggcctgtcggacacgccgccgggcggcgcggcgcccgaagaccttggctcttcg
ccgttgcagcgcatgcagtccatcaccaactcgctgctgacgcaaacggcgacgccgacc
atgcctacgaccaaccagcgccagaacaaggccgtcctaccgcccattacgcagcagcag
ttcgaccagtacaacaacctcaacaccgaggagatagtcaagaaggtgaaggagcagctg
agccagtactcaatcagccagcgtctgttcggcgagaacgtactgggcctgtcccagggc
tcggtgtccgacctgctggcgcggcccaagccgtggcacatgctgacgcagaaaggccgc
gagcccttcatccgcatgaagatctttctcgaggacgagaatgccgtacacaagctggtc
gcctcgcagtacaagatcgcacccgagaagctcatgcgtacctcgggattcaccgccgcc
ttccagcccgctcggtacgtgttccaacgtgcagctggttcgagcaagcttcccgcgtcc
agcgcagcggcggccagggctgctgccgcgcgtgacctgccgtcgcatcgcaacagccac
tgtgacagcgcgtcaccgctgctaggcaagagccccttcagcgcctcgcccgagctgcag
gtggctctcatgcaacagcatcaccaacagcagcagcagcagcagcaacagcagcaggac
tctcgcgtggcaatgtacgcgccaccctcgagtcccacgacggctgcccgcaagggccac
tctcaccacccgagcggcggcggcggccgatctctgccgtacgtgcagccctcggtgtac
gagatggcagcgctcaccaccgacttggacacacagaccatcacggccaagatcaaggag
acgcttatggctcataacattggtcagaagatcttcggcgaggccgtgcttgggctgtct
cagggctctgtgagtgaactgttgtccaagcccaagccatggcacatgctgagcattaag
ggcagggagcctttcatccgcatgcagctctggctgaacgacccgcacaacgtcgagaag
ctgcaagtcatcaagaatgagcgtagagaagcgaacaagcggcgccgaactcacgtggac
ctggaggctgctccgcgtccgatggaggcgcagccgccttcgctgcctgccctgacgccc
ggtgctgggagcttcccatttgcggcgccgtcgtcccccttcccggcagccaagaagcca
cgtgtgctcttttcggacgagcagaaggaagcgttgcggctcgccttctccatggacccg
tacccgagcacggccacaatcgagttcctcgcgaacgagctgggactctctgtgcgcacc
atcaccaactggttccacaaccaccgcatgcggctcaagcagcatgtcgtctctcccggt
cctgacgacaacccgccgcgaagcgagccgtcgacgcttctcggcccaccgcccggatca
cgcgagggctccgcctctttcgacccggctctgttccgaggtctcctcgttcagcggctc
gccgaaatgcatggcagcggtggggacaagagcgggcctagcgctttcggtgcgggcgcc
ngcggcgctctcagcctcaatgcttacaacagttactccccgtcatcgcaacagggcaac
gacgaaggcacgctagacctgagcatgtcgtcgagccaggcgtcttcaggtcgcaggacg
tgggctcgcggtggcggaacgcccactgaagaccttgacgactcgaacttgtcccaggac
gaacccgcgaccgcgggaagtgaccgcgactcgctgaaggaagagagcatctcgacgcct
tctccacacaacagctacagcagtcggcgacggaaaccagcggtgcccaagtgggtagac
cctggcctgtcaccggactcggacgatgccgaggacgacgaggcgggtgacgcggaaagc
gccataatcaatggcgtctgcgtccgccagacggtcgctgctggtgacttcgggctgaga
cttcgcgagacggtgcgggtggatcccgtagcggccgccgacgatgcccgcaagagtgcc
gagagggacgacctggatgaggacgacgatgaagaggaggagacggcactcgaactgtgc
accaccgccaagaagcctagcagtggcgacggaatgcggaaaactagaacagaggctgga
caaccgtggcgaagaacgtggcgaggactgggagttctagaacattacataccgggcaca
cagctgtcccacgtctag
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integrated database retrieval system
