Rhipicephalus microplus (southern cattle tick): 119183493
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Entry
119183493 CDS
T07403
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119183493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119183493
Spliceosome [BR:
rmp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
119183493
Complex C
U5 SnRNP specific factors
119183493
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
119183493
NCBI-ProteinID:
XP_037289614
LinkDB
All DBs
Position
1:229026806..229245963
Genome browser
AA seq
2368 aa
AA seq
DB search
MAGLPPYMLGQPYVMGVLAQQQAMAAQLAAQVHAQMQQQQQQHLQQQQLQQQRQQEAISE
EKLQEKARKWQQLQSKRYAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMSSRKYRHDKRV
YLGALKYMPHAVLKLMENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIESVYIAQWGTM
WIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQMDLDNDEDSPVCKWF
YDHKPLAETKHMNGVTYRHWNLTLPQMATLYRLANQLLTDLVDDNYFYLFDLKSFFTAKA
LNMSIPGGPKFEPLIKDMNPADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNMPHYVH
LSWYHTPNVVYIKTEDPDLPAFYFDPLINPIAHRQGTKQTVDPLPDDEEEFELPEHVQPF
LQDCPLYTDNTANGIALLWAPRPFNLRSDRTRRAIDIPLVKSWYREHCPPGMPVKVRVSY
QKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQGYNMLNLL
IHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDSHVQYRLN
NVDAFQLSDGLQYVFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLVYYRFNTGPVGKGPGC
GFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRA
SVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKMKA
DWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISAEEAV
AIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLI
EQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLW
YEADKRRLFPPWIKPADSEPPPLLVYKWCQGINNLQDVWDTAEGECNVMLESRFEKMYEK
MDLTLLNRLLRLIVDHNIADYMTAKNNVIINYKDMNHTNSYGIIRGLQFSSFIVQYYGLV
LDLLVLGLQRASEMAGPPQVPNDFLSFQDVATEAAHPVRLYSRYIDRIHVFFRFTAEEAR
DLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTT
VQWESSFVSVYSKDNPNLLFNMGGFECRILPKCRMTHEEFSHKDGVWNLQNEVTKERTAQ
CFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYYREAVVNTQELLDL
LVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTD
VGITHFRSGMSHDEDQVIPNLYRYIQPWESEFIDSQRVWAEYALKRQEALAQNRRLTLED
LEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNL
NNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLN
QIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHE
SIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFATYKWNVSRPSLLAD
SKDTMDGTTTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVLIAIDL
AYNLHSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQN
YGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVW
AGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGS
ELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNN
ERTKVILKPDKTTITEPHHIWPTLTDDEWIKVEVQLKDLILADYGKKNNVNVASLTQSEI
RDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETQSF
ASKTEWRVRAISATNLHLRTNHIYVSSDDIKEAGYTYILPKNILKKFIIISDLRTQIAGY
LYGASPVDNPQVKEIRCIVVVPQCGSHQGVQLPQALPQHEHLRDLEPLGWLHTQPNELPQ
LSPQDVTTHARIMADNPSWDGEKTVIITCSFTPGSCSLTAYKLTPSGYEWGRQNTDRGNN
PKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHDPSMKYELQLANPKEFYHE
IHRPSHFLNFSSLEEPDSIGNDREDLYA
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggcgggactaccgccgtacatgctgggccagccatatgtgatgggcgtgctggcccag
cagcaggccatggcagctcagctggctgcccaagttcatgcacagatgcagcaacagcaa
cagcagcacctgcaacagcagcagcttcagcagcagcgccagcaagaggccatctcggag
gagaagcttcaggaaaaagcacgcaagtggcagcagttgcagtccaagcggtatgctgaa
aagcgcaagtttggctttgtggatgcacagaaggaagacatgccaccggagcacatccgc
aagatcattcgtgaccacggtgacatgagcagtcgcaagtatcggcatgacaagcgtgtt
tacctgggagcgctgaagtacatgccgcatgctgtgctcaagctgatggagaacatgccg
atgccctgggagcagatccgagatgtcaaggttctctaccacatcactggggccattact
tttgtgaacgagattccttgggtcatcgaatcggtctacattgctcagtggggaactatg
tggatcatgatgcgtcgagagaagcgggatcggcgacacttcaagagaatgcgctttccc
ccttttgatgacgaggaacctccactggactatgccgacaatgtactggatgtggaacct
cttgaggccatccagatggacttggacaatgatgaagactcgcctgtctgcaaatggttc
tacgatcacaagccactagcagaaaccaagcacatgaacggtgtgacgtacaggcattgg
aacctgactctgccccagatggcgaccctataccgcttggccaaccagctgctcactgat
ctggtggatgacaactacttctacttgtttgacctcaaatccttcttcactgccaaagct
ctgaacatgtccattccgggaggtccaaagtttgaaccccttatcaaggacatgaaccca
gcggatgaagactggaatgagttcaacgacatcaacaagatcatcatacgccagcccatt
cgtactgagtacaggattgcttttccatacttgtacaacaacatgccacactatgtacat
ctttcatggtatcacactcctaatgtagtgtacatcaagactgaagatcctgacctgcca
gcattctactttgaccctttgataaaccctattgcacatcgtcaaggcaccaagcaaact
gtggaccccttgcctgatgacgaggaagagttcgagctgccagagcatgtgcagcctttc
cttcaggattgccccttgtacactgacaacacagccaatggtattgcattgctgtgggcc
ccgcgcccattcaacttgcgctcagaccgcactcgccgtgccattgacattcctttggtg
aagtcctggtaccgtgagcactgtcctccaggcatgcctgtgaaggtcagggtctcgtac
cagaagttgctcaagtactttgtgctcaatgcactcaagcaccggccccccaagccacag
aagaagaggtacctcttcaggtcgttcaaatcgaccaagttcttccagactactacaatt
gactgggtggaagctggactgcaggtgtgtcgccagggctacaacatgctcaacctactg
attcaccgtaagaacctcaactatctccaccttgactacaacttcaacctcaagcctgtc
aagacactcaccaccaaggagcgcaagaagagtcgctttggcaatgcattccacttgtgt
cgtgaaatccttcggctgaccaagttggtggtggacagccatgtgcagtaccggctgaac
aatgtggatgccttccaactgtccgatggcctgcagtatgtgttcgcccacgtaggccag
ctgacgggcatgtaccgctacaagtacaagctcatgcgacagatccgcatgtgcaaggac
ctcaagcatctggtctactatcgctttaacacgggccctgtcggcaaaggaccgggctgc
ggattctgggcacctggttggcgtgtgtggctgttcttcatgcgaggcatcacccctctg
ctcgagcgctggctgggtaacctgctgtctcgccagtttgaggggcgtcactctaaagga
gtggccaagactgtcaccaagcagcgtgtggaaagccactttgatctggagctcagggca
tcggtgatgcatgacattctggacatgatgccggagggcatcaagcagaacaaagcccgt
acaattctgcagcatctctccgaggcctggcgctgttggaaggctaacatcccttggaag
gtgcccggtttgccgattcccattgaaaacatgattttgcgctacgtaaagatgaaggct
gactggtggaccaacacagcccactataaccgggagcgcatacgtcgaggagccactgtg
gacaagacagtctgcaagaagaacttgggccggctcacacgactctacctgaaggccgag
caagaaaggcagcacaactacttgaaggatgggccttacatcagtgccgaggaggctgtg
gccatatacacgacgacagtgcactggctggagagccgtcgcttctcgcccatcccgttc
ccgcccctgtcatacaagcatgacaccaagctgctcattttggccctagagaggctcaag
gaagcctacagtgtgaagagccggctgaatcagtcgcagcgagaggagttggggctcatt
gagcaggcttacgacaacccccacgaagcactatcacgcattaagcgtcacctgctcaca
caacgagctttcaaggaggtgggcatagagtttatggacctgtacagccacctgattccc
gtgtatgatgtggaacccctggagaagatcacagatgcctacctggaccagtatctgtgg
tacgaggcagacaagcggcgtctctttcctccctggatcaagcctgccgattcagagcct
ccacctctgctcgtgtacaagtggtgtcagggcatcaacaacctgcaggacgtgtgggac
actgccgagggcgagtgcaacgtcatgctcgagtctcgatttgagaaaatgtatgagaag
atggacctgacacttctcaatcggcttctgcgcctcatcgtggaccacaacattgctgac
tacatgacagccaagaacaacgtcatcatcaactacaaggacatgaatcacacgaactcg
tatggcatcatacggggcctgcagttctcctccttcatcgtccagtactacggcctggtg
ctggacctgctcgtgctggggcttcagcgagcgtccgagatggcgggacccccgcaagtg
cccaatgacttcctctcattccaggacgttgctacagaggcggcacatcctgtgcgcctc
tactcgcgctacattgaccgcatacacgtattcttcaggtttactgctgaggaagctaga
gacctgattcagcgctacctgacagagcaccctgacccaaacaatgagaacattgttggg
tacaacaacaagaagtgctggcccagagatgcccgtatgcgcctcatgaagcatgatgtt
aacttgggtcgtgcagtgttttgggacatcaaaaaccgactgccgcggtcagtgacgaca
gtccagtgggagagcagctttgtgtccgtctatagcaaggacaatcccaacttgctgttc
aacatgggtggctttgagtgccgtatcttgcccaagtgccgtatgacccatgaggagttc
agccacaaggatggtgtgtggaacctgcagaatgaagtgaccaaggaaagaacagcacag
tgcttcttgcgagtcgatgatgagtcaatgcagcgtttccacaatagagtccgacaaatc
cttatggcatctggatctaccactttcactaagatcgtgaacaagtggaacacggcattg
attggtctgatgacatactaccgggaggctgttgtcaatacgcaagagctgcttgacctg
ttggtgaagtgtgagaacaagattcagacccgtatcaagattggcctcaactctaagatg
cccagccgcttcccacccgtggtgttttacacccccaaggagctgggtggcttaggcatg
ttgtctatgggccatgtgctcatcccacagtcagacctcaggtggtcaaagcagacggat
gtgggcatcacgcactttcgttcaggcatgagccatgatgaagaccaagtgattccaaat
ttgtaccgatacattcagccctgggagagtgaattcatcgattctcagcgtgtttgggct
gagtatgcactgaaacggcaggaggcactggcacagaacagacgcctgacgttagaggac
ttggaggacagttgggaccgtggcattccacgaatcaacacgcttttccagaaagaccga
catacacttgcctatgacaagggctggcgtgtgcgcacggatttcaagcaataccaggtg
ctgaagcaaaacccattttggtggacgcaccagaggcacgatggcaagctgtggaacttg
aacaactaccgaacagacatgatccaagcactgggcggtgtggaaggcatcctggagcac
accctgttcaagggaacatacttccccacctgggaaggtctcttctgggaaaaggccagt
ggtttcgaagagtccatgaagtacaagaagcttaccaatgcacagcggtctggtttgaac
cagattcccaacaggcgcttcacgctctggtggtcacccaccattaatcgtgccaacgtg
tacgtaggcttccaggtgcagttggacctgactggcatcttcatgcatggcaaaatcccc
acgctcaagatctcgctcatccagatattccgagctcacctgtggcagaaaatccatgag
agcattgtcatggacttgtgccaggtctttgaccaagagctagatgccttggaaattgag
accgtacagaaagaaacaatccacccacggaaatcttacaagatgaacagctcttgtgcg
gacgtgctgctttttgccacttacaagtggaatgtctcgcggccttcccttttagctgac
tcaaaggacaccatggatgggacaacaacacagaagtattggattgatgtgcagctgcgc
tggggtgactatgactcgcatgatgtggaacgctatgcccgagccaagtttctggactac
acaactgacaacatgagcatatacccttcgcccactggtgtgctgattgctattgacctt
gcctacaacttgcacagcgcatatggcaattggttcccgggctgcaagccactcatccag
caggccatggccaagatcatgaaggccaacccagcattgtatgtgctgcgtgagcgcatt
cgaaagggcctccagctgtactcctctgagccgactgagccttatctcagctctcagaac
tatggtgaactcttctcgaaccagataatctggtttgtggacgacaccaacgtctaccgt
gtcaccatccacaagacctttgagggcaacctcacaaccaagcccatcaatggtgctatc
ttcatcttcaacccacgaactggacaactgttcttaaagatcattcatacttcagtttgg
gctggccagaaacgcttgggacagctggccaaatggaagactgcggaagaagtggctgcc
ctgattcggtcactgccagtagaagagcagcccaagcagatcattgtcactcgcaaaggc
atgctagaccctctggaagtgcacctgttggacttccccaacattgtcatcaaaggcagt
gaactgcagcttcctttccaggcatgcctcaaagttgagaagtttggcgacctgatcttg
aaggccaccgagccacagatggtgctttttaacctctatgacgattggctcaagactatc
tcctcttacacagcattctcacgtctcatcctcatcctgcgagccctccacgtcaacaat
gagcgcaccaaggtgatcctcaagccggacaaaaccaccataaccgagccacaccacatc
tggcccactctgaccgacgacgagtggatcaaagtggaagtacagctgaaggacctcatt
ctggccgactatggcaagaaaaacaatgtaaacgtggcctcattgacacaatccgagatt
cgagacattatccttggcatggagatctcagcaccatcagctcaacgccaacagattgcc
gagattgagaagcagaccaaagagcaatctcagctgacagccaccactacccgtactgtc
aacaagcacggtgatgagataatcacctctacaaccagcaactatgaaacgcagtctttt
gcctccaagactgaatggcgtgtacgagccatctcagcaacgaaccttcacctgcgtaca
aaccacatttatgtttcctctgatgacatcaaagaggctggttacacctacatcctcccg
aagaacattcttaagaagttcataatcatatcagatttaaggacacagattgccggctac
ttgtacggggccagccctgtggacaacccacaagtgaaggagattcgctgcattgtggta
gtgccccagtgcggtagccaccaaggagtgcagctgccacaggcactgccccagcatgag
catttgcgtgatctggagcctttgggctggcttcacactcagcccaatgaactgccccag
ctctcgcctcaggatgtgacgactcatgcacgcataatggccgacaacccctcatgggac
ggtgagaagaccgttatcatcacttgcagcttcacgcctggctcctgctctctgactgca
tacaaactgacaccaagtggctacgagtggggccgtcagaacacagaccgaggcaacaac
ccaaagggctacttgccatctcactatgaacgggtccaaatgctgctctcggaccgcttt
cttggctttttcatggtgcctgcccagggatcctggaactacaacttcatgggtgtgcgg
catgatccaagcatgaagtatgaactacaactcgccaaccctaaggagttctaccatgaa
attcacagaccttcacacttcctcaacttcagcagcctggaggagccagactctattggc
aatgacagagaggacctttacgcttga
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integrated database retrieval system
