Rhipicephalus microplus (southern cattle tick): 119184953
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Entry
119184953 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119184953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119184953
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119184953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_22
HDA2-3
SWI2_SNF2
AAA_34
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
119184953
NCBI-ProteinID:
XP_037289998
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MNLVNQPQPPQDAVKKVCIEHSRSVIPSPSFGSPHDESCHKSPSAPPTPPKSIGTQLPLS
DASGASTNARYYSVVWCKKSMKKHKKWEGDAVLIIKGRSATLRSLEGKELSSAFGYKVKE
VDAIEEGSVFSIGGKECEIQTSISTEDYLSGRCFSDGFVPAATQEDSKQSSSAPTLKTSA
QQNPTVKFPAFRSPHVGGLPPNASSKKVFVLPPSPQIKQDSLVMPRPNNIHQWDNNKKNL
PVTDVVVEDSLTRCLRPHQREGVVFLYECIMQMRAFDGCGAILADEMGLGKTLQCITLIW
TLLRQGPYGGQPCLRKVIIVTPSSLVKNWVKEFKKWLPNRNLRVYHVDQNNKIDIFLNDP
SMYPVLILSYEMYMRASDRLSRINFDLLICDEAHRLKNANIKTTESLHSLGTLRRILLTG
TPVQNDLQEFFALVDFCNPGILGKSSSFRRIYEEPILRSQLPGATEEEKELGPARANELM
QTTSPFILRRTQDVIQSYLPGKVECVVFCRPQPLQLALYQNMLETSMVRACLSSYLSTDA
NCHLACILARKLCNHPLLVASQEFADKDEDVGLAALHAEARRGLQSEFDPTMMELESGSG
KLVVLAAMLHSLXDLPATREIVLVSNFTKTLDILEDICMQKGYPFLRLDGSTSSTQRLEL
VERFNSPHSNCFVFLLSCKAGGVGLNLVGASRIVLYDVDWNPANDLQAMARVWRDGQSRH
VSIYRLLTTGTIEEKIFQRQVTKQELSGAVLDSKKDGKRAKFSLEDLKDLFTLDEETTSS
THRLLGCRCDSVEDTDGDFSDSHSRAEVVAETSGAPKRSSQLGSATTPSIIGQKLGMSDL
LRWEHIPAPIGKHFSQDPHLAAAEDHITFVFRNTLCKAQKENVGAHL
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgttaaccaaccacaaccacctcaagatgctgtgaagaaggtctgcattgag
cattcacgttctgtgataccaagccccagctttggctcaccacatgatgagagctgtcac
aaaagtccgtcagcgcctccaacaccaccaaagagtataggaacacagttacccctgtct
gatgcatcaggagcgagtacaaacgcacgttactacagtgttgtctggtgcaagaagtcc
atgaagaaacataagaagtgggagggtgatgctgtactcatcatcaaaggacggtcggcg
acactgagaagcctggagggaaaagaattgtcttcagcatttgggtacaaagtgaaggag
gttgatgcaatcgaagaaggaagcgttttcagcatcggtggcaaggaatgcgagattcaa
acatccatatctactgaagattatttatcaggacgctgtttcagtgatggctttgtacct
gcagcgacgcaagaggactcgaaacagtcaagttcggcacctacacttaagacatcagca
caacaaaatcccacagtcaagttccctgctttcagaagccctcatgtgggaggccttccc
cccaatgcaagcagcaaaaaggttttcgtcctgccacccagtccacagattaagcaggac
tcgttagtcatgccacgcccaaacaacattcaccaatgggacaacaacaagaaaaacctt
cctgtgacggacgtagtcgttgaagactcgctcacccggtgcctgcgacctcaccagcgg
gaaggtgtcgtctttctatacgagtgtatcatgcagatgagagcgtttgatggatgtggc
gcaattctggcggatgaaatgggccttggaaagacccttcaatgtatcacactcatatgg
accctactgaggcaaggaccatatggaggccaaccatgtcttcgtaaagttatcattgtc
acaccgagtagccttgtcaagaattgggtcaaggagttcaagaagtggctgccgaacaga
aaccttcgagtgtaccacgtcgatcagaataacaaaattgacatctttttaaatgaccca
tctatgtatcctgtgctgattctttcgtacgagatgtatatgcgcgccagcgatcgcctt
tctcgtatcaacttcgacttgctcatctgtgatgaggcacacagattgaagaacgccaac
atcaaaaccacagagtctctacacagcttgggaacattacgtagaatcttgctgacaggg
acacctgttcagaatgacctgcaagagttttttgcccttgttgatttctgcaatcctgga
atattgggcaagtcatcaagttttcgtcgcatatacgaggaacccattctgcgatcacag
cttccgggggccaccgaggaagagaaggagctgggcccggcacgggccaatgagctgatg
cagaccacgtcgccgttcattcttcgacgaacccaggatgttattcaaagctaccttcct
ggaaaagtggaatgcgttgtcttctgccgcccacaaccacttcagctggctctgtaccaa
aacatgctggaaacaagcatggtgcgcgcttgtctgagcagttatttgtcgactgacgcc
aactgccaccttgcttgcatcctggctcggaagctctgcaaccatcccttactcgttgca
tcccaggagttcgccgataaggacgaggatgtaggcttggccgccctacatgccgaagct
cggagaggtctccagtccgaatttgatcctacaatgatggagctcgaatcgggctctgga
aaactcgtggttttggctgccatgcttcattctctgntggacctcccagccacgagagag
atagtcctggtctctaacttcacaaagactctggacattcttgaagacatatgcatgcag
aaagggtatccattcttgaggcttgatgggtcgacgtcatcgacacagcgcttggagctt
gtcgagcgattcaactctccacactcaaactgctttgtgttcctgctcagctgtaaggcc
ggcggtgtggggctgaaccttgtgggagccagtcgtatagttttgtacgacgtagactgg
aaccctgcgaatgacctgcaagccatggcacgtgtttggagggatggtcaatctcgacat
gtttctatctacagacttctgaccacgggcactatcgaagaaaaaatcttccagcggcaa
gtgacgaaacaggaactcagtggagctgttctagacagtaagaaggatggaaagagagcc
aagttttccctggaagacctcaaggacctgttcacgctcgatgaagagaccactagctcg
actcacagactgctgggctgtagatgcgacagcgtggaggacacagacggcgatttcagt
gacagtcattcccgagctgaggtggtagcggagacaagtggcgcgcccaagcgctcatct
caactgggcagtgcaacaactcccagcatcatcggacagaagcttggcatgagcgacttg
ttgcggtgggaacacattccggcaccgataggcaagcatttttcgcaggaccctcacctg
gctgctgctgaagaccacatcacatttgtttttcgcaacactctctgtaaagcacaaaaa
gaaaatgttggtgcacatttatag
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