Rhipicephalus microplus (southern cattle tick): 119185177
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Entry
119185177 CDS
T07403
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
119185177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmp03400
]
119185177
DNA repair and recombination proteins [BR:
rmp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
119185177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_III
MutS_V
MutS_IV
MutS_I
MutS_II
FANCI_S4
RGI1
Motif
Other DBs
NCBI-GeneID:
119185177
NCBI-ProteinID:
XP_037290175
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MAELLPNVDIAEVEKDPGFLKYLKSLPEKPATTFRFFDRSDYYTVHGPDAEYVCREMYRS
MSALKYLGSGDSRVPSVCVSQRSYENLLSELLLIKHYRVEVYRNTAARGSASWTLAIQAS
PGNLAPLEDVLFGGTSSGLSQSKGVLAVSVHTNQQTLGIAYGDAVLQQLTVAEFVDDEHF
SNLSTVLAQLNPQECLLSATDAKRCPELKALLERSGALVNEAKTGDFNSKEIAQDLSCLL
QPSQLPQGQASMLPELDLKVAMDALAAVIKFLNLTSCAEHLGCLRLCTFEFGQFVRLNSA
AIQALAVLPVDGEGPKAASEPSLLRLLNRCRTVGGQRMLSQWLRQPLCDLNRIEERLDLV
SLLVDDWELRQSLHEQMLRQFPDLLRLSRKLHKQRVSLQELYKMYQCLQVLPKLREALTK
ASESHKSPLLGAIFATPIKVLEADFSKFLEMVETTLDFEAIEQGDYLVKPEFDDELKALH
EELEKVKSECEGYLRKAAKDLGLEAAKTIKLETSRDLGYYFRVTRKEEPALRSRKGYTTI
DTKQNGVRFRNGPLTEANERFLASRKAYDQAQEGITKMIVEIAAGYWEPLQQLSEIISHL
DVLVGFAVAAVSATGKPFVRPSMRPKGSGVIQMTALRHPLVEAQGDVLFIPNDVDIRKGS
SSCYIITGPNMGGKSTYIRSVALAVLMAQVGSFVPCDSAELTVVDAVLTRIGAGDQQLKG
VSTFMAEMLESAHILR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggccgagctgttgccaaacgttgacatcgcggaggtagaaaaagaccccggctttctc
aagtacctgaagtccttgccagagaaacctgccacgacattccgcttttttgacagaagt
gactactacacagtacatggtccagacgcagagtatgtctgccgggaaatgtaccgcagc
atgtcagcactcaagtacctcggctcgggtgactcacgtgtgccatccgtgtgtgtgagc
caacgcagctatgagaacctcttatctgaactgctgctcatcaagcactaccgggtcgag
gtgtatcgaaacacagctgcacgtggctccgcatcctggaccctcgccatacaggcatct
cctggaaacctggcacctttggaggatgtcctttttggaggcaccagtagtggcctttcc
cagtccaaaggagtgttggccgtctcggtgcatacaaaccaacaaaccctgggaattgcc
tatggagacgccgtcctacagcagctgacggttgcagagtttgtggacgacgagcatttc
tcgaacctgagtactgttttggcccagctgaatccacaagagtgcctgctgtcagccaca
gacgcaaagcgctgccccgagttgaaggccctcttggagcgctctggtgccctggtcaat
gaggcaaagacaggcgatttcaactccaaagaaatagcacaagacttgagctgtttattg
cagccgtctcagctgccacagggacaggcaagcatgctgcctgaactggatctgaaggtg
gccatggatgccttggcagcagtcataaagtttctcaatctgacgtcctgtgccgagcac
cttggttgccttcggctttgcacatttgaatttggccagtttgtgcgcctcaatagtgca
gccatccaagccctggctgtgcttcctgttgacggggaaggtcccaaggcagcctctgaa
ccaagcctcctgcgtttgctgaatcgatgccgcaccgtgggcggtcagcgtatgttgagc
cagtggttgcgacagccactctgtgacctcaatcgcattgaggagcgtctggaccttgtg
tctttgctcgtggacgactgggagctgcgacaaagccttcacgagcagatgctgcgacag
ttcccagacctcttgaggctgtcacgtaagctccacaaacagcgagtctccctgcaggaa
ctttacaagatgtatcaatgcctgcaagttctgcctaaattgcgggaggctttgaccaag
gcatcagagtcgcacaagtcaccgcttcttggtgccatttttgctacgccaatcaaggtc
ctggaggcagatttcagtaagtttctagagatggtggagaccactctggactttgaagct
atagagcaaggggactacctggtgaagccggagtttgacgacgagctcaaagcgcttcac
gaagagttggagaaagtgaaaagtgaatgcgaaggctacctcagaaaggctgcgaaagac
ctcggcctggaagctgccaagaccataaagctggagacaagcagggatctgggctactac
ttcagagtgacacgcaaggaggaaccagcattgcgttcgcggaagggctacacaactatc
gacaccaagcagaacggcgtgcgcttccgcaacggaccactgactgaagccaacgaacgc
tttctggcatcacggaaggcgtacgatcaggcccaggaaggaatcaccaagatgatcgtt
gagattgctgctggctactgggagcccctgcagcagctgtcagagatcatatctcacctc
gacgtcttggtcggttttgcggtggcggctgtgtcggccactggcaagcccttcgtacgg
ccgtccatgcggcccaaaggctcgggtgtgatacagatgacggccttacgccatcctttg
gtggaagcccaaggcgatgtccttttcatccccaatgacgtggatatccgcaaaggttcc
agttcctgttacattatcaccggtccaaacatggggggcaaatcgacctatatacgatca
gtggccctagcagtgctcatggctcaagtgggaagctttgtgccatgtgattctgccgag
ctgacggttgtggatgccgtgctgacgcgcatcggagctggtgaccagcagcttaagggc
gtctctacatttatggccgagatgctggagtccgcacacatcctcagg
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