Rhipicephalus microplus (southern cattle tick): 119187552
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Entry
119187552 CDS
T07403
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 75-like
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119187552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmp03009
]
119187552
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119187552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EML
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Motif
Other DBs
NCBI-GeneID:
119187552
NCBI-ProteinID:
XP_037291591
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Position
1:complement(258241369..258278390)
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AA seq
774 aa
AA seq
DB search
MTYKSHLTPRCRTGASLVKHKGTFSYDSKLFLVPSGTSVKVYSCATGERAGTFSEHNTEV
VAVVRNPENLVSXWMHFAIFQVLSCSDDGVVYKWDPSDGSVLKKHEISIHVEDGKESKVR
GFYAPPSFSSWFVLRQEPDASHGTLESVSRDGAEGQVLVEKVTLGSSSPVAFNSEGGFYA
AIYKAKLFVGTTGLPSQSASMFRAMGHKKGVKFCCVTCHPSEPSLATGDSLGRITIWQGL
KETNPVRTIHHWHTLPVCDLAYTVSGSFLLSGGGECVLVKWSLPSGGKQFVPRMGLPICH
IATSPDATLILTAHADNCLRLVSSQMNVVQQVQGLALSQGSARELLFHDPRSSALLLRGL
PGHLQFYQPHEDKQLFCLDVVGQNYMTQEREGGIVNTEVVLAALADDWLVTVEHWADGNL
GPETRLKFWRFDHVLQNFVLDTSVYAPHNGPLKDLQLYNPGSESSGGTFLALTTGDDRKF
RLWAPQNEVAVPDGPAAALQSQVHVSSWNCIGSGSFRGFVAGKGSISQDGSLLAVGFGRS
ATLWSEDCALRAALAHPQCPSSITELCFGQGASSHLLTTCTEVKLIVWDIICLTVLWELE
CTVTCLVADVSTEAVAAFCSNDSMLLFEPRIKDSVQTNDVPAECQPVRAATFLPSGSDSG
DALQRLCFLSKEQELYSWVDDTKEKEVTMAHQSLKLESVVPPTPFGALVAQETRSAVATE
APEQHRLGLSGFREVRQLLDVASHTLPPMTSLYENLLSAFLSNKEQRKRLRYEA
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgacctacaaaagccatttaactcctcgctgtaggacaggagcaagcttggtaaaacac
aaagggacgttctcctatgactccaagctttttctcgttccgagcggcacaagtgtaaaa
gtctacagctgtgctaccggagaacgtgcaggcaccttcagcgaacacaacactgaagta
gttgctgttgtaaggaacccagaaaaccttgtctcttaatggatgcactttgccattttt
caggtgctaagttgttctgacgacggtgttgtgtacaagtgggacccttcagatggttct
gtgcttaagaaacatgagatttcgatacatgttgaagatgggaaggaatccaaggtgaga
ggcttctatgctccgccatcattttcctcctggtttgtcctcaggcaggaaccagatgcc
agccacgggacgctcgagagtgtgtctcgtgatggtgcagaaggccaggtgctcgtggag
aaggttacccttggcagctcctctcccgtcgccttcaactcggaaggtggtttctatgca
gccatctacaaggccaagctcttcgtcggaactacagggctgccttcccaatcagcatct
atgtttcgagccatgggtcacaagaaaggcgtgaagttctgctgcgttacctgccacccc
agtgagccatcacttgctaccggtgactccttggggcgcatcaccatctggcagggccta
aaagagacaaatccagtgcgtacaatccaccactggcatacacttccagtttgtgatttg
gcttacactgtttccgggagcttcctgctaagcgggggcggtgaatgtgtgctggtcaag
tggagcctgccatcaggaggaaaacagtttgtgcctcgcatgggcttaccaatttgccac
atcgccacctcacctgatgccactttgatcctcacagcacatgccgacaactgtctgcgg
ttggtgagcagccagatgaatgtggttcagcaagtgcaagggcttgcactgagtcaaggg
tccgcacgtgagctgttgtttcacgacccccgctccagtgccctgctcctacgaggactg
ccagggcatttgcagttctaccaaccccacgaagacaagcagctcttctgcctggacgtg
gtgggccagaactacatgacccaagaacgcgagggcggcattgtcaacacagaggtggtc
ctcgctgcccttgctgatgactggctcgtcaccgtcgagcactgggctgatggcaactta
ggccctgagactcgcctgaagttctggcgttttgaccatgtgctccagaactttgtcctg
gacacaagtgtctacgcaccgcacaatggccccctgaaagacctgcagctgtataatccg
ggcagcgaaagcagtggcggcaccttccttgccctcacaacaggtgacgaccgcaagttt
cgtctctgggcaccacagaatgaggtagcagttcctgatgggccagcagccgctttgcag
agccaagtgcatgtgagctcgtggaactgcattggctcggggtccttcagaggctttgta
gctggcaagggctccatttcccaagatggctcactgctggcagtcggctttggccgatca
gcaacactctggtctgaggactgtgccctgagggctgcattggcccaccctcagtgccct
tccagcatcacggaactgtgttttggtcaaggcgcctcctctcacctcctcacaacatgc
acagaagtaaagctgattgtgtgggacatcatctgcctcacagtactgtgggagcttgaa
tgcaccgtcacctgccttgtagcggacgtctcaacggaagcagtggcagcattctgcagc
aacgactcaatgctcctgtttgagccaaggatcaaggactctgtacagaccaatgatgtc
cctgccgaatgccagccagtcagagcagccacgtttttgcccagtggctcagactctggt
gatgccttgcagcggctctgctttctcagcaaagagcaggaactctattcctgggtagat
gacaccaaggaaaaggaagttacgatggcacatcagtctctaaaactggagtctgtggtg
cctcccacaccatttggcgctctggtggctcaagagacccggtcagctgtggcaaccgag
gcccctgaacagcacaggctgggactttctggctttcgagaagtacgccagcttctggat
gtggcttctcacactttgccaccgatgacaagtctgtacgaaaatttgctgtcagcattc
ctgagcaataaagaacaacgaaaaagacttcggtacgaagcataa
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