Rhipicephalus microplus (southern cattle tick): 119187787
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Entry
119187787 CDS
T07403
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119187787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmp03041
]
119187787
03009 Ribosome biogenesis [BR:
rmp03009
]
119187787
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119187787
Spliceosome [BR:
rmp03041
]
Complex A
U1 snRNP components
U1 related factors
119187787
Complex B
119187787
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119187787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Fasciclin
Utp25_C
UvrA_inter
DNA_circ_N
Pyridoxal_deC
Motif
Other DBs
NCBI-GeneID:
119187787
NCBI-ProteinID:
XP_037291768
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MFAKFVRQCIPVASRGKNTYNRWPKERDALWRAGNTLGRTLVAPRFDSLKLPPFEKNFYA
ESEVTAARCEEDVSAFRAEHEITVQGHGRDRVPKPVLTLEECNFPPECRPLFERKNITQP
SPIQAQAWPIVMSGSDLVGIAQTGSGKTLAYVLPAAIHMAHQQRPRGEGPISVVLAPTRE
LVQQISQVAYEWCEGAFGLSGTPVYGGVSKGPQIERLRRGVHMCVATPGRLLDILETGSV
NLLRCTFLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTVMWSATWPSEVRSLAQEFLIPD
HVQVTVGSTDLCANHNIKQVVHVCDEFEKENKLLGILQDIMEQGEQRTLIFVARKSSVVQ
LLQKLQSKGFRAVATHGDLSQSKRDIALDRFRSGATPIMVATDVAARGLDVSDVKYVINY
DYPDTSEGYVHRIGRTGRSDREGTSITLFTPDNAAQAKQLIAVLQEAGQDVPEELQQLVN
LHVSKQAIVRHMKKGKHQQGSWKRPRHYRYENEVAETRGWG
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaatttgtccggcagtgcatcccagtagcttcaagaggaaagaacacgtac
aatagatggcctaaagagcgggacgcactgtggcgagcaggtaacacgcttgggcgaacg
ttggtcgctccgaggttcgacagtcttaaactgccgccatttgagaaaaacttttatgct
gagagcgaagtgaccgctgctcgatgcgaggaagacgtcagtgccttccgcgcggaacac
gaaataactgtgcagggccatggccgagatcgtgttccaaagcccgttctgacgcttgaa
gagtgcaactttccaccggagtgtcgtcccctttttgagcgcaagaacattacgcagccg
tcgccgatacaagctcaggcatggccgatcgttatgagtggcagcgatttggtgggcatc
gcccagactggctctggaaaaacgttggcctacgtgctccctgcggccatacacatggcc
caccagcagcgtccgcgaggagaggggcccatcagcgtggtcttggctccgacgcgtgaa
ctcgtccagcagatctcgcaggttgcatacgaatggtgcgagggtgcgtttggcctatca
ggtacaccggtgtacggaggtgtctccaagggtccgcagattgagcgtctgcgacgaggc
gtgcacatgtgcgttgcgacgcccggaagacttttggatatcttggaaacgggttctgtg
aaccttctacgctgcacctttcttgtcttggacgaggcggaccgcatgctggatatgggc
ttcgagccgcagatccgcaaaatcatcgagcagatccggccagatcggcagactgtcatg
tggagtgccacttggccttctgaggttcgctctctggcccaggagttcctcatacccgat
cacgtgcaggtcacggtgggctcgacagacttgtgtgcgaaccacaacatcaaacaagtc
gtccacgtgtgtgatgagtttgaaaaagaaaacaagctgctgggcattctacaggacatc
atggagcagggggagcagcgcacactgatctttgttgcccgcaagtcaagtgttgtacag
ctgctgcagaaattgcaaagtaagggcttcagagctgtggccactcatggtgacctgtca
caaagcaagcgggacattgcgttagatcgttttcgcagtggtgcaactcctatcatggta
gctactgatgttgctgcaagaggccttgatgtgagtgatgttaagtatgtcattaactat
gactacccagacacatcggaaggctatgtccatcgcattggccgcactggacgcagtgac
cgagagggcacttccattaccttattcactcccgacaatgctgcacaagctaagcagctt
attgcagtgctacaagaagcaggtcaagatgtgccagaagaactgcagcagctggtgaac
ttgcatgtctcaaaacaagctattgtacgacacatgaagaagggaaagcaccagcaaggt
tcatggaagcgacctcggcactaccgctatgaaaacgaagtagcagagactcgtggttgg
ggttga
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