Rhipicephalus microplus (southern cattle tick): 142765823
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Entry
142765823 CDS
T07403
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
rmp
Rhipicephalus microplus (southern cattle tick)
Pathway
rmp03013
Nucleocytoplasmic transport
rmp03015
mRNA surveillance pathway
rmp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rmp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
142765823
09122 Translation
03013 Nucleocytoplasmic transport
142765823
03015 mRNA surveillance pathway
142765823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmp03019
]
142765823
03041 Spliceosome [BR:
rmp03041
]
142765823
03009 Ribosome biogenesis [BR:
rmp03009
]
142765823
03012 Translation factors [BR:
rmp03012
]
142765823
Enzymes [BR:
rmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
142765823
Messenger RNA biogenesis [BR:
rmp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
142765823
mRNA cycle factors
Stress granule specific factors
142765823
Spliceosome [BR:
rmp03041
]
Complex C
Other components
EJC/TREX
142765823
Ribosome biogenesis [BR:
rmp03009
]
Eukaryotic type
90S particles
Helicases
142765823
Translation factors [BR:
rmp03012
]
Eukaryotic type
Initiation factors
eIF-4
142765823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
Motif
Other DBs
NCBI-GeneID:
142765823
NCBI-ProteinID:
XP_075723739
LinkDB
All DBs
Position
6:complement(202328261..202369490)
Genome browser
AA seq
401 aa
AA seq
DB search
MAARRRVVQTEDLSNVEFETSEDVEVIPTFDAIGLREDLLRGIYAYGFEKPSAIQQRSIK
PVIKGRDVIAQAQSGTGKTATFSIGVLQTVDTQMRETQALILSPTRELAVQIQKVILALG
DYMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRNLRTRAIKMLVLDEAD
EMLNKGFKEQIYDVYRYLPPCTQVVLISATLPHEILEMTSKFMTEPVRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLSEKMREANFTVSSMHGD
MPQKERDAIMKEFRSGQSRVLITTDIWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR
FGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgccgccgcgttgtgcaaacagaggacttgtcgaatgtggagttcgaaacc
agcgaagatgtagaggtgataccgacgttcgacgccattggcctcagagaagatctgctg
cgaggcatttatgcatatggttttgagaagccatctgccattcagcagcgttctatcaag
ccagtgatcaaaggcagggatgtgattgctcaggcccaatctggcactggcaagactgct
accttttccatcggagtgttgcagaccgtcgacacacagatgcgggagacgcaggctctg
atcttgtcgcctacacgcgagctggccgtacagatccagaaggtgattctggcattgggc
gactacatgaacgtccagtgccacgcctgcattgggggcaccaacttgggcgaagacatc
cgcaagcttgactatggacagcacgtagtttctggcactccaggacgtgtctttgacatg
atcaaaaggcgaaacctgcgcactcgtgctatcaagatgttggttctcgacgaagctgat
gaaatgctaaacaaaggtttcaaggagcagatctacgatgtgtaccggtacctgccccct
tgcactcaggtggtgctcatctctgctaccctcccccacgaaatcctggagatgacaagc
aagttcatgacagaacctgtgcgaattctggtcaaacgtgatgagttgaccctggaaggc
atcaagcagttctttgtggctgtggagcgtgaggagtggaagtttgacaccctgtgcgac
ttgtacgacacactcaccatcacccaggctgtcatattctgcaacaccaagaggaaggtg
gactggttgagcgagaagatgcgggaagctaatttcaccgtttcgtccatgcatggtgac
atgcctcagaaagagagggacgccattatgaaggagttccgctctggccagagtcgagtg
ctcatcaccacagatatttgggcacggggcatcgatgtccagcaggtgtcccttgtcatt
aactatgatctgcccaacaaccgagagttgtacatccacaggattggacggtccggtcgt
tttggtcgaaaaggtgttgccatcaattttgtcaaaaacgatgacatccgcatcttgaga
gacattgagcagtactacagtacccagattgatgaaatgcccatgaatgttgctgacctc
atctga
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integrated database retrieval system
