Rhodothermus marinus DSM 4252: Rmar_0069
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Entry
Rmar_0069 CDS
T01119
Name
(GenBank) pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
rmr
Rhodothermus marinus DSM 4252
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rmr03009
]
Rmar_0069
03016 Transfer RNA biogenesis [BR:
rmr03016
]
Rmar_0069
Enzymes [BR:
rmr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
Rmar_0069
5.4.99.29 23S rRNA pseudouridine746 synthase
Rmar_0069
Ribosome biogenesis [BR:
rmr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rmar_0069
Transfer RNA biogenesis [BR:
rmr03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
Rmar_0069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
ydhR
Motif
Other DBs
NCBI-ProteinID:
ACY46978
UniProt:
D0MK65
LinkDB
All DBs
Position
72006..72713
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AA seq
235 aa
AA seq
DB search
MELPILYEDDDLLAVHKPEGLAAIPERDPSRPSARRLLEAARGERLWVVHRLDKEASGVL
LFARNAEAHRYMNTLFEQRQVRKVYRALVHGRLEPGQGQIRAPIRMYGSGRMGVDPERGK
PSETRYRVLEYLDEAYSLIEALPLTGRRHQIRVHCYHIGHPIVGDPRYGDRSVQQRYPRL
MLHALSIRFRHPNGQELEIVAPVPESFQQVLDALRTELAASTTDHSATTSSPSST
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggaactcccgattctctacgaagacgacgacctgctggccgtgcacaagcccgagggg
ctggcggccatccccgagcgcgatccgtcgcggccctcggcgcggcggttgctcgaagcg
gcacgcggcgagcgcctctgggtggtccaccggctggacaaagaagcctcgggcgtgctg
ctgttcgcccgcaacgccgaagcacatcgctacatgaacacgctcttcgagcaacgacag
gtgcgcaaggtgtaccgggccctggtgcacggccggcttgagcccggacagggacagatc
cgggcgccgatccgcatgtacggctccggacgcatgggcgtcgatccggagcgcggtaag
cccagcgagacgcgttaccgggtgctggagtacctggacgaagcctattcgctgatcgag
gcgttgccgctgactggccgccgccaccagatccgcgtgcactgctaccacatcggacat
cccatcgtgggcgatccccgctacggcgaccgctcggtgcagcagcgctatccgcgcctg
atgctccatgccctcagcattcgcttccgacatccgaacgggcaggagctggaaatcgtg
gcaccggtgcccgaaagctttcagcaggtgctcgacgcgcttcgcaccgagctggcagcg
tccacgaccgaccactcggccaccacttcgtcgccctcgagcacgtag
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