Rhodothermus marinus DSM 4252: Rmar_0078
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Entry
Rmar_0078 CDS
T01119
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00730
Thiamine metabolism
rmr01100
Metabolic pathways
rmr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Rmar_0078
Enzymes [BR:
rmr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Rmar_0078
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Put_Phosphatase
Motif
Other DBs
NCBI-ProteinID:
ACY46987
UniProt:
D0MK74
LinkDB
All DBs
Position
complement(84474..86357)
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AA seq
627 aa
AA seq
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MIPKPPAAIRRVYVSGNRYPELRVPFKEVQLSPTRLPDGSLEPNDPVLLYDTRGPWGDPD
FHGDIRQGLPPLRRPWIEARGDVEEYDGRPVQPIDDGYRSEEERRRAEQRGKLHRWPGPR
RRPLRGKNGAAVTQMHYARQGIITPEMEFVAIRENQRRERLIELQKELGDRWSLAFQHPG
QPWGAQIPPVITPEFVRDEVARGRAIIPCNVNHPECEPMIIGRNFLVKINANIGTSAVSS
SIDEEVEKLLWAIYWGADTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVGGKP
EELTWEIFRDTLIEQCEQGVDYMTIHAGVRLAYIPLTANRRTGIVSRGGSIIAKWCLAHH
RENFLYTHFEEICEILRQYDVSISLGDGLRPGSIQDANDEAQFAELKTLGELTRIAWKYD
VQVMIEGPGHIPMHLIKENVDRELEDCYEAPFYTLGPLVTDIAPAYDHITSAIGAAMIGW
FGAAMLCYVTPKEHLGLPNKNDVREGVIAYKIAAHAADLAKGHPGAQYWDNALSKARFEF
RWEDQFNLSLDPERAREYHDETLPAEGAKLAHFCSMCGPKFCSMKITEEIRAMAAEKGVD
ARQVIEEGLEEKAREFREKGAEIYTAP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgattcccaagccacctgctgcgattcggcgcgtgtacgtatcgggcaaccgctatccg
gagctgcgcgtcccgttcaaggaggttcagctttcgcccacgcgcctgccggacggaagc
ctggagcccaacgatccggtcctgctctacgacacgcgcgggccgtggggcgatcccgac
ttccacggcgacatccgccagggcctgccgccgctgcggcgtccctggatcgaggcccgt
ggcgacgtcgaggaatacgacggacggccggtgcagcccatcgacgacggctatcggagc
gaggaagagcgtcggcgtgccgagcagcgcggcaagctgcaccgctggcccggtccgcgt
cggcgcccgctccgcggcaaaaacggcgcggccgtcacacaaatgcactatgcgcgccag
ggtatcatcacgcccgagatggagtttgtcgccatccgcgaaaaccagcggcgcgagcgg
ctcatcgaactccagaaagagctgggcgaccgctggtcgcttgccttccagcatccgggc
caaccctggggcgcccagattccgcccgtcatcacgcccgagttcgtgcgcgacgaggtg
gcccgcggccgcgccatcatcccgtgcaacgtcaaccacccggagtgcgagccgatgatc
atcggccgcaacttcctggtcaagatcaacgcaaacatcggcacctcggccgtctccagc
tccatcgacgaggaagtcgaaaagctgctgtgggccatctactggggcgccgacacggta
atggacctctcgacgggcaaaaacatccacgaaacgcgcgagtggatcatccgcaacagt
ccggtgcccatcggaacggtgcccatttaccaggcgctcgaaaaggtgggcggcaagccc
gaagagctgacctgggagatcttccgcgacacgctcatcgaacagtgcgagcagggcgtc
gactacatgacgatccatgcgggcgtccggctcgcctacatcccgctgacggccaaccgg
cgcacgggcatcgtctcgcgcggcggctcgatcatcgccaaatggtgcctggcccaccac
agggaaaacttcctctacacgcactttgaggaaatctgcgagattctgcgtcagtacgac
gtgtcgatcagtctgggcgacgggctgcggcccggctccatccaggacgccaacgacgag
gcccagtttgccgagctcaagacgctcggcgagctgacccggatcgcctggaagtacgac
gtgcaggtgatgatcgaaggccccggccacatccccatgcatctgatcaaggaaaacgtg
gaccgggagctggaagactgctacgaggcgccgttctacacgctcgggccgctggtgacc
gacatcgccccggcctacgaccacatcacgtcggccatcggcgcggcaatgatcggctgg
ttcggcgcggccatgctctgctacgtcacgcccaaggagcacctgggcctgcccaacaag
aacgacgtgcgcgagggcgtgatcgcctacaagatcgccgcgcacgcggccgacctggcc
aaggggcaccccggcgcccagtactgggacaacgcgctctcgaaggcccgcttcgaattc
cgctgggaggaccagttcaacctgtcgctcgatccggagcgggcccgcgagtaccacgac
gaaacgctcccggccgaaggggccaagctggcgcacttctgctcgatgtgcgggccgaag
ttctgctccatgaagatcaccgaggaaatccgggcgatggccgccgaaaaaggcgtcgat
gcccgccaggtgatcgaagaagggctggaggaaaaggcccgcgagttccgcgaaaaaggc
gccgaaatctacacggccccctga
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