Rhodothermus marinus DSM 4252: Rmar_0210
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Entry
Rmar_0210 CDS
T01119
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00020
Citrate cycle (TCA cycle)
rmr00190
Oxidative phosphorylation
rmr00650
Butanoate metabolism
rmr01100
Metabolic pathways
rmr01110
Biosynthesis of secondary metabolites
rmr01120
Microbial metabolism in diverse environments
rmr01200
Carbon metabolism
Module
rmr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rmr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rmr_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Rmar_0210
00650 Butanoate metabolism
Rmar_0210
09102 Energy metabolism
00190 Oxidative phosphorylation
Rmar_0210
Enzymes [BR:
rmr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Rmar_0210
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
FAD_oxidored
Thi4
FAD_binding_3
Pyr_redox
Cucumo_coat
AlaDh_PNT_C
NAD_binding_8
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ACY47116
UniProt:
D0MD06
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Position
222592..224331
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AA seq
579 aa
AA seq
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MIFSHDVVIVGAGGSGLMAALYAKEGGADVAVISKLHPLRSHTGAAQGGIGAALGNEEED
HWLWHAFDTVKGSDYLGDQDAIEIMCQDAPRTIIELEHYGVPFSRNKEGKIAQRRFGGHT
RNFGEAPVRRTCHAADRTGHAILHTLYDQCVKNQVRFYDEFQALDLIMTPDGVCCGVVAY
ELLTGEIHIFHAKMVCLATGGYGRVYKTTSNAHASTGDGMAIVLRSGLPLEDMEFVQFHP
TGLYRLGILVTEGARGEGGILLNDKGERFMERYAPTVKDLAPRDLVSRAIYREIREGRGI
NGKDYVYLDLRHVGREVIETKLPEIATFSRTYLGIDPVKEPIPVAPTCHYAMGGIPTSYD
GQVERAGRGSIVPGLYAVGECACVSVHGANRLGSNSLVDLVVFGRRAGIHMAETLRKEGR
KKEPLPENPDRRVREMLEDILSRTQGEPVAVVRADLQQTMMDNVSVFRTEETLNTALEDL
KQIRERAQRVVIRDKSKRFNTELMDAVELGFLVDLAEVITRSALNRTESRGAHSREDYPK
RDDENWLKHTLIYREGEGEYRFDYKPVTITRFQPQERKY
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgattttctcacacgacgtcgtcatcgtaggagccggtggttcgggcctgatggcggcg
ctttacgccaaggagggcggtgcggacgttgcggtgatctcgaaattgcacccgctgcgc
tcgcataccggtgccgcacagggcgggatcggcgcggcgctgggcaacgaagaggaagac
cactggctctggcacgccttcgacacggtcaaggggagtgactacctgggcgaccaggat
gccatcgagatcatgtgccaggacgccccccggaccatcatcgagctggagcactacggc
gtgcccttcagccgcaacaaggaggggaagatcgcgcagcggcgcttcggcggccatacg
cgcaacttcggcgaggcgccggtgcggcgtacctgccacgccgccgaccggaccggtcac
gccatcctgcatacgctctacgaccagtgcgtcaaaaaccaggtccgcttctacgacgag
tttcaggcgctggacctgatcatgacgcccgacggggtctgctgcggggtggtggcctac
gagctgctcaccggcgagattcacatcttccatgcgaagatggtctgcctggctacgggc
ggctacgggcgcgtctacaagacaacctcgaacgcccacgccagcacgggcgacggcatg
gccatcgtgctccgcagcggcctgccgctcgaagacatggagttcgtgcagttccatccc
acgggcctgtaccggctgggcattctggtgaccgaaggggctcgcggcgaaggcggcatt
ctgctcaacgataagggcgagcgctttatggagcgctacgcgcccaccgtgaaggatctg
gccccgcgtgacctggtttcgcgggccatctaccgggagatccgcgagggccgtggcatc
aacggcaaggactacgtctatctggatctgcggcacgtcgggcgcgaagtgatcgagacg
aagctccccgagatcgccacgttcagccgcacctatctggggatcgatccggtgaaagag
ccgatcccggtggcgcccacctgccactatgcaatgggcggcatccccactagctacgac
gggcaggtggagcgggccggtcgtggtagcatcgtgcccggcctttacgccgtgggcgaa
tgcgcctgcgtgtcggtgcacggggccaaccgcctgggctccaactcgctcgtcgatctg
gtcgtcttcggacgccgggccggcatccacatggccgagacgctgcgcaaggaagggcgc
aaaaaagaaccgctgccggaaaatccggaccgacgcgtccgcgaaatgctggaagacatt
ctgagccggacgcagggcgagccggtggcggtcgtgcgcgcggacctgcagcagaccatg
atggacaacgtctccgttttccgcaccgaggagacgctgaacacggcgctggaggatctc
aaacagatccgggagcgggcccagcgcgtggtgatccgggacaagagcaagcgcttcaac
acggagctgatggacgccgtcgagctgggctttctggtcgatctggccgaagtgatcacg
cgctcggccctgaaccgaaccgaaagccgcggcgcccactcgcgtgaggactacccgaag
cgcgacgacgagaactggctcaagcacacgctcatttaccgcgaaggagaaggtgagtac
cggttcgattacaaaccggtgacgatcacccgattccagccgcaggaacgaaagtactga
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