Rhodothermus marinus DSM 4252: Rmar_0274
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Entry
Rmar_0274 CDS
T01119
Name
(GenBank) penicillin-binding protein, 1A family
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00550
Peptidoglycan biosynthesis
rmr01100
Metabolic pathways
rmr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rmar_0274
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rmar_0274
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rmr01003
]
Rmar_0274
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmr01011
]
Rmar_0274
Enzymes [BR:
rmr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Rmar_0274
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Rmar_0274
Glycosyltransferases [BR:
rmr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Rmar_0274
Peptidoglycan biosynthesis and degradation proteins [BR:
rmr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Rmar_0274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ACY47180
UniProt:
D0MDI7
LinkDB
All DBs
Position
complement(290608..292959)
Genome browser
AA seq
783 aa
AA seq
DB search
MPDRWTHTEEELRRYFSDPNFRHARLQGDGHAPRKRRGLVGFFYRRFRDPRKAQAALVLS
VLVGLILLGVLALGLYVWSLSDELPSFQQLDNPTFELATIAYTADGKELARYARQNRTWV
SYDEISPYVIQALLATEDHRFYDHWGVDLFRTASAVTQTILSLGREVQGGSTITQQLARN
LYNEQIGRAQTIERKLKEMVTAVELERRYTKREIIEMYLNTVEFVYNAFGIESAARTFFN
KPARDLNVLEAATLVGMLRNPALYNPIRFPERARQRRNVVLWQMVRHGYLDRDFFEAHKD
DPIVTDFRTSAITASIAPYFAEYVRRWLVNWAKAHGYNIYTDGLRVYTTLDSRLQELARQ
AVDEQMRGLQAVVDYEWSRRSGFFLGQDVNLYLQQKNYEPFAYYWSSKRDTVDQFIRETE
HYRRLVAGGVAPDEALRRLRADRAFMDSLKAVKTRLEAGFVAIDPRNGYVRAWVGGRDLT
RDWYDHVAIARRQPGSTFKPFLYTAAIDNGWSPYDVLPDSSVTYVDPAGNVWQPRNAEGE
STGQLLTLREALARSVNTVSARLVLQVGARNVAFYARRMGIKSPLKEVPSLALGTSNVTL
LELVSAYATLASGGLYYEPTVVTRIEDASGNVLYEARPVPREAISEETAYTVVDMLRDVI
RYGTGTRIRWQFGLTRYDFAGKTGTTQNSADGWFILMHPELVTGAWVGFNDPRVTFRTHW
WGQGAHNALFIVGDFWRRMEQAPDIEISNATFPLPIGLHQPGTDSLRQERRITPELNQRR
VGW
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccgctggacgcacaccgaggaggaattgcggcggtatttcagcgacccgaac
ttccggcacgcccgactacagggcgacggccacgcgccccggaaacgccggggattggtt
ggctttttctatcgacgcttccgggatccacgcaaagcccaggcggcgctggtgctgagc
gtgctggtggggctgatcctgctgggcgtgctggcactgggtctgtacgtgtggtcgctt
tcggacgaactgccctcgttccagcaactcgacaaccccacctttgagctggccaccatc
gcctacacggccgacggtaaggaactggcccgctacgcccgtcagaatcgcacctgggtt
tcctacgacgaaatctcgccctacgtcattcaggccctgctggctaccgaagaccaccgc
ttctacgatcactggggcgtcgacctgtttcgcacagcctcggccgtgacgcagacgatc
ctgagcctgggccgcgaggtgcagggcggctcgaccatcacgcagcagctggcccgcaac
ctgtacaacgaacagatcggccgggcgcagacgatcgagcgcaagctcaaggaaatggtc
acggccgtcgaactcgagcgccgctacaccaagcgggaaatcatcgaaatgtacctgaac
acggtcgagttcgtctacaatgcgttcggcatcgagtcggcggcccgcacgttcttcaac
aagccggcccgggatctgaacgtgctggaggcggccacgctcgtgggcatgctgcgcaac
ccggccctttacaacccgatccgctttccggagcgtgcccgccagcggcgcaacgtcgtg
ctctggcagatggtccggcacggctacctggaccgggatttcttcgaagcgcataaagac
gatccgatcgtcacggactttcgcacctcggcgatcacggccagcatcgccccgtacttt
gccgaatatgtgcggcgctggcttgtcaactgggcgaaagcgcacggctacaacatctat
acggacggcctgcgcgtctacaccacgctcgacagccgactgcaggagctggcccgccag
gccgtcgacgaacagatgcgtggcctgcaggccgtcgtcgactacgaatggagccgccgc
agcgggtttttcctgggtcaggacgtcaacctgtacctccagcagaagaactacgaaccg
ttcgcctactactggtccagcaagcgcgacacggtcgatcagttcatccgtgaaaccgaa
cattaccgtcgcctggtggccggcggcgtggcccccgacgaagcgctccgtcggctccgg
gccgaccgggccttcatggactcgctcaaagcggtcaagacgcgtctggaggccggtttt
gtggcgattgacccgcgcaacggctacgtccgggcctgggtgggcggccgcgatctgacg
cgggactggtacgaccacgtggccatcgcccgccgccagccgggttccacgttcaagccc
ttcctctacacggcagccatcgacaacggctggtcgccttacgacgtgctgcccgacagc
tcggtgacctacgtggacccggcgggaaacgtctggcagcccagaaacgccgagggggaa
tcgaccggccagctcctcacactgcgtgaggcgctggcccgctcggtcaacacggtttcg
gcccggctggtgctgcaggtgggcgcgcgcaacgtggccttctacgcccggcgcatgggc
atcaaaagtccgctgaaagaagtgccctcgctggcgctgggcaccagcaatgtgacgctc
ctggagctggtctcggcctatgccacgctggccagcggcggcctctactacgaacccacg
gtggtcacccgcatcgaagatgccagcggcaacgtgctctacgaagcccggccggtaccg
cgcgaggccatctccgaagagaccgcctacacggtggtcgacatgctgcgtgatgtgatt
cgctacgggaccggcacacgcatccgctggcagttcgggctgacgcgttacgactttgcc
gggaagacgggcaccacgcagaacagcgccgacggctggtttatcctgatgcaccccgag
ctggtcaccggcgcctgggtgggcttcaacgacccgcgcgtcacgttccgcacgcactgg
tggggccagggcgcccacaatgccctgtttatcgtgggcgatttctggcgacgcatggag
caggcgccggacatcgaaatcagcaacgccacgttcccgctcccgatcggcctgcaccag
ccgggcaccgactcgctccgccaggaacgtcggattacgcccgaactgaaccagcgccgc
gtgggttggtaa
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