Rhodothermus marinus DSM 4252: Rmar_0285
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Entry
Rmar_0285 CDS
T01119
Name
(GenBank) alpha amylase catalytic region
Organism
rmr
Rhodothermus marinus DSM 4252
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Por_Secre_tail
FlgD_ig
CBM_48
AMPK1_CBM
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ACY47191
UniProt:
D0MDJ8
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Position
309925..312897
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AA seq
990 aa
AA seq
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MRRFWLFALLFWYGATVASGQVVWTDPAVVRVDRPVTIYFNAKEGTGGLAGYTGDVYAHT
GVITNESRTDTDWRYVKADWGENRADIRMERIGEDLYRLHIPDIRAYYQDYSGTPPPGAP
PWDNIYDEQILKLAFVFRNADGSREGKDVGGRDIFVDVAPPGLAVTFAAPSVTPLRPLIA
PRDTSVEVVAVADPGAGATLTAFRLLVEGVEVAQTTDDTLRYTLTLNVPGRFDVLAIAEN
SLGEADTAAFYAVRNPAVEDRPRPPGIEDGINYDPNDPTRVTLSLYAPGKSFVYVIGDFT
NWEVDPAYFMYRDAPRPDSVHWWITIEGLTPGQEYAFQYFIDGELRLADLFAHKVLDPWH
DPFIPSSTYPNLKPYPTGKTEGIVAVLQPGAPQYQWQVTDFERPPAHELVIYELLLRDFV
AKHDYATLIDTLDYLERLGVNAIELMPVAEFDGNISWGYNPAFHLAPDKYYGPADDLKRF
VDECHRRGIAVILDVVYNHATGNSPLVQLYGPTADNPFINIPARHPFNVFYDLNHEHPYI
QYWLDRANRYWLEEFRVDGFRFDLSKGFTQKYTDNDVGAWSAYDASRIRLLKRMADAIWA
VDSTAYIILEHFADNQEEKELAAYGQDRGRAGMLLWHNLNRAFSQSVMGYLNDPNFSSDL
TTIYYKNRGFPTPNLIAYMESHDEQWLMYRMRAYGARQGSYDVRSLPVALDRMKLAGAFF
FTVPGPKMIWQFGELGYGYGERGEQCLEGAGDSCPSIAPGRIDPKPIRWDYRNDPLRMKL
YKTWAELLRLRREHAVFRSPETQVRMRLQHGVPGRWLSLTHPELSVVVVGNFGLEPLVVT
PTFPQTGTWYDYFNGDSLVVDDPNTGIELLPGEFRLYTNRYVGQAEPGLITVGVASGDAS
TRPERVRLETPFPNPFRTQVTLRYALPEPMRVKLAVYDLLGRRIATLADGLQAAGRHTIT
WMPEKLAAGLYLVRLEAGGHTETRPVLFAP
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggttctggctgtttgcgctgctgttctggtatggcgcgaccgtcgcttccgga
caggtggtctggaccgatcccgctgtggtgcgcgtggatcggcccgtcacgatctacttc
aatgcaaaggaaggcacgggcgggctggccggctacacgggcgacgtctacgcgcacacg
ggcgtcatcacgaatgaaagccgcaccgacaccgactggcgctatgtgaaagcggactgg
ggcgaaaaccgtgcggacatccgcatggagcgcatcggcgaagacctctatcgcctgcac
atccccgacattcgcgcctactatcaggattactcgggcacgccgccgcccggggcgccg
ccgtgggacaacatctacgacgagcagatcctcaagctggctttcgtctttcggaatgcc
gacggctcgcgtgagggcaaagacgtgggtggccgcgacattttcgtggacgtggcgccg
cccggtctggccgtcacgtttgccgcgccgagcgtgacgccgctgcgcccgctcatcgca
ccgcgcgacaccagcgtggaggtcgtcgccgtggccgatccgggggccggcgccacgctg
acggccttccgcctgctggtcgaaggcgtcgaagtagcgcagaccaccgacgacacgctt
cgctacacgctgacgctgaacgtgcccggtcgtttcgacgtgctggccatcgccgaaaac
tcgctgggcgaggccgatacggccgccttctacgccgtccgcaaccctgccgtcgaggac
cggccgcgtccgcccggcatcgaagacgggatcaactacgacccgaacgatcccacacgg
gtcacgctctcgctttacgcgccgggcaagtcgttcgtctacgtgatcggcgacttcacg
aactgggaggtggacccggcctacttcatgtaccgcgacgcaccgcggcccgacagtgtc
cactggtggatcaccatcgaaggactcacgccggggcaggagtacgctttccagtacttt
atcgacggcgagttgcggctggccgatctgttcgcgcacaaggtgctcgatccctggcac
gatccgttcatcccgagcagcacgtacccgaacctgaagccctacccgaccggcaagacc
gaagggatcgtggccgtgctgcaacccggcgcgccacagtatcaatggcaggtgaccgac
ttcgagcggccgcccgcgcacgagctggtcatctacgagctgctccttcgcgacttcgtg
gcgaagcacgactacgccacgcttatcgacacgctcgactacctggagcgcctgggcgtc
aacgccatcgaactgatgcccgtggccgagttcgatggcaacatcagctggggctacaac
ccggcctttcatctggcgcccgacaagtactacggtccggccgacgacctcaagcgcttc
gtggacgagtgtcaccgccgcggcattgccgtcatccttgatgtcgtctacaaccatgcc
acgggcaattcgccgctggtgcagctctacggccccaccgcagacaatcctttcatcaac
atccccgcccgccatcccttcaacgtattctacgacctgaaccacgagcacccctacatc
cagtactggcttgaccgggccaaccgttactggctggaggaattccgcgtggacggcttc
cgcttcgacctttcgaaaggctttacgcagaaatacaccgacaacgacgtcggcgcctgg
agcgcctacgacgcctcgcgcatccggctgctcaagcgcatggccgatgcgatctgggcg
gtcgattccacggcctacatcattctggagcattttgcggacaatcaggaagaaaaagaa
ctggccgcctacgggcaggatcgtggacgcgccgggatgctgctctggcataacctgaac
cgcgccttcagccagagcgtgatggggtacctgaacgacccgaacttttcgtccgatctg
accacgatctattacaaaaaccggggtttcccgacgccgaacctgatcgcctacatggaa
agccacgacgaacagtggcttatgtaccggatgcgggcctacggggcgcggcagggatcc
tacgacgtgcggagcctgcccgtggcgctggatcggatgaagctggccggggcgtttttc
ttcacagtgcccggaccgaaaatgatctggcagttcggcgagctgggttatggctacggc
gagcgcggcgagcagtgcctggaaggcgcgggcgatagctgtccgtccattgcgcccggc
cgtatcgatccgaagcccatccgctgggactatcgcaacgatccgctccggatgaagctg
tacaagacctgggccgagctgctcaggcttcggcgcgaacatgccgtgttccgcagcccg
gaaacgcaggtgcgcatgcgattgcagcacggcgtgcccggtcggtggctctcgctcacg
catccggagctgagcgttgtggtggtgggcaacttcggcctggagccgctggtggtcacg
cccacgttcccgcagacgggcacctggtacgactacttcaacggcgactcgctggtggtc
gacgatccgaatacaggcatcgaactgctgcccggcgagttccggctctacacaaaccgt
tatgtggggcaggccgagccaggcctgatcaccgtgggcgtcgcttcgggcgatgcgtcg
acgcggccggaacgcgtgcggctggagacgccatttccgaacccgttccgcacgcaggtt
acgctccgctatgcgctgcccgagccgatgcgggtaaagctggccgtttacgatctgctg
ggccgtcggattgccacgctggcagacggcctgcaggcggccggacgacacacgatcacc
tggatgcctgagaagctggcggccgggctgtatctggtgcggctcgaagccggcggccac
acggaaacccgcccggtgctgtttgctccctga
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