Rhodothermus marinus DSM 4252: Rmar_0479
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Entry
Rmar_0479 CDS
T01119
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr03030
DNA replication
rmr03430
Mismatch repair
rmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rmar_0479
03430 Mismatch repair
Rmar_0479
03440 Homologous recombination
Rmar_0479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmr03032
]
Rmar_0479
03400 DNA repair and recombination proteins [BR:
rmr03400
]
Rmar_0479
Enzymes [BR:
rmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rmar_0479
DNA replication proteins [BR:
rmr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rmar_0479
DNA repair and recombination proteins [BR:
rmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rmar_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
DNA_pol_A_exo1
RNase_H_2
DNApol_Exo
Motif
Other DBs
NCBI-ProteinID:
ACY47381
UniProt:
D0MET1
LinkDB
All DBs
Position
530156..530659
Genome browser
AA seq
167 aa
AA seq
DB search
MPLEVAPLLFFDVETSGLRPDRGAAIVELALLGAREPLLLWKGTSAQRLQRAQFRELFAH
VREGVIVGHNLRFDFWFVTYEAGRLGLAVPPIRFIDTLGLARRLLPEQADYRLVALLHAL
GIEPDKPLHTAVADAQATRALFWKLVERGKLRTLADAGMKQLTWTHR
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcgaggtggcaccgctgcttttcttcgacgtggagaccagcgggctgcggcct
gatcgtggcgccgcgatcgtcgaactggcgctgctcggcgcgcgtgagccgctcctgctc
tggaaagggacaagcgcgcaacgactgcagcgcgcccagttcagggagctgttcgcgcat
gttcgggaaggggtgatcgtcggacacaacctgcgcttcgacttctggttcgtcacgtac
gaggccggacggctgggattggccgtgccacccatccggttcatcgacacacttggactg
gcccggcgtttgctgcccgaacaggctgattaccggctcgtcgccctgctgcacgcgctg
gggatcgaaccggacaaacccctgcatacggccgtagccgatgcacaggctacccgtgcg
cttttctggaaactggtggaacgaggcaagctgcgtaccctggccgacgccggcatgaag
caattgacctggactcatcgctga
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