Rhodothermus marinus DSM 4252: Rmar_0626
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Entry
Rmar_0626 CDS
T01119
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00061
Fatty acid biosynthesis
rmr00071
Fatty acid degradation
rmr01100
Metabolic pathways
rmr01212
Fatty acid metabolism
rmr02024
Quorum sensing
rmr04146
Peroxisome
Module
rmr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rmar_0626
00071 Fatty acid degradation
Rmar_0626
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rmar_0626
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rmar_0626
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rmr01004
]
Rmar_0626
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmr04147
]
Rmar_0626
Enzymes [BR:
rmr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rmar_0626
Lipid biosynthesis proteins [BR:
rmr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rmar_0626
Exosome [BR:
rmr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rmar_0626
Exosomal proteins of breast cancer cells
Rmar_0626
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACY47525
UniProt:
D0MFJ8
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All DBs
Position
complement(708608..710509)
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AA seq
633 aa
AA seq
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MPAIVAFDTIPQLFNRLVAHYRGQRRPALSYKDRRTKTWVDITWEELEQHVHAMAGYLHK
RGVRPGDRVAILSENRPEWAITDLATQILGGVNVALYTSLPASQVGYIVKDSGARILVVS
SAVQLRKAETIFDECPELQEIVTLSEMRKDHPPYVRAWDDVMAEGAAYWAEHEAELSKLA
EQVQPDDLSALIYTSGTTGLPKGVMLTHRNFCSNVQAALQRVDFGPADHHLSFLPLCHSF
ERTAGYTAVLACGARISYAESIEALSQNLLEVRPTVMISVPRLFERVYNAIHKSVEKSPS
LQQKIFHWAVGVGRRMAACRLEGRTPGPVLQLQHRLAHRLVFQKLHDRLGGNLRFAVSGG
AALPRHIGEFFLAIGLTIIEGYGLTETAPVLTVNPPDRPRFGTVGWVLPGVTIAIQRLTD
GKIVGQLSGDDYPSDLTTEEGEILVKGPNVMKGYWNNEEATREVFDADGWFHTGDVGRFD
RGYLVITDRIKHMIVSRGGKNIYPGPIEDQLKQEPWIDQIVVIGEGREFLTALIVPDFEA
LRQYAQEHNLQAASDEALLALPEIRALFEQSLRRYNRHAPAHERIRAFRLLSEPFTIENG
LLTPTLKPRRRQIEAHYADLIEAMYTEFGGDGD
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccatcgttgccttcgacaccatccctcagcttttcaaccgcctggtggctcac
taccgcggccagcgtcggcctgcgctgagctacaaggaccgtcgcacgaaaacctgggtg
gacatcacctgggaagagctggaacagcacgtgcacgcaatggccggctacctgcacaag
cggggcgttcggcccggcgatcgcgtggccattctttcggaaaatcgtccggaatgggcg
atcaccgacctggccacgcagatcctgggcggcgtcaatgtggcgctgtacacgtcgctc
ccggcctcccaggtgggctacatcgtcaaggactccggtgcgcgcattctggtggtctcg
tcggccgtgcaactccgcaaggcggagacgatcttcgacgagtgccccgagctgcaggag
atcgtcacactgagtgaaatgcgcaaagaccacccgccctacgtgcgggcctgggacgac
gtaatggccgaaggcgccgcttactgggccgagcacgaggccgaactgtcgaagctggcc
gagcaggtgcagcccgacgacctgagcgcgctcatctataccagcggcaccaccggcctg
cccaaaggcgtcatgctcacgcaccgcaacttctgctcgaacgtgcaggcggccctgcag
cgcgtggacttcggtcccgccgaccaccacctgtcgttcctgccgctgtgccattcgttc
gagcggacggccggctacacggccgtgctggcctgcggcgcccgcatctcctatgccgaa
agcatcgaagcgctgagccagaatctgctcgaagtgcggccgaccgtgatgatctcggtg
ccgcgcctgttcgagcgtgtctacaacgccatccacaaatccgtcgaaaaaagtccgtcg
ctccagcagaagatcttccactgggccgttggcgtcggccgccgcatggccgcctgtcgg
ctggagggacgcacgcccggaccggtactgcaactccagcaccgactcgcccaccggctg
gtcttccagaaactgcacgatcggctgggcggcaatctgcgctttgccgtctcgggcggg
gccgccctgccccgccacatcggcgaattctttctggccatcggcctgacgatcatcgaa
ggctacggcctgaccgaaacggccccggtgctgaccgtcaacccgccggaccgcccgcgc
ttcggcaccgtcggctgggtgttgccgggcgtgacgatcgccatccagcgcctgaccgac
ggcaagatcgtgggccagctctccggcgacgattacccgagcgatctcaccaccgaagaa
ggggaaattctggtcaaaggcccgaacgtgatgaagggctactggaacaacgaggaggcc
acgcgcgaggtgttcgacgccgacggctggttccatacgggcgacgtgggccgcttcgat
cggggctacctggtcattaccgatcgcatcaagcacatgatcgtctcccggggtggcaag
aacatctacccaggtcccatcgaagaccagctcaaacaggagccctggatcgaccagatc
gtggtgatcggcgagggacgggaatttctgacggcgcttatcgtgcccgacttcgaggcg
cttcgccagtacgcgcaggagcataacctgcaagccgcgtccgacgaagcgctgctggcg
cttcccgagatccgagcgcttttcgagcagagcctgcgccgctacaaccgacatgcgccg
gcccacgaacgcatccgggccttccggctgctcagcgaaccgttcaccatcgaaaacggg
ctgctcacgcccacgctgaaaccgcgtcgtcgccagatcgaagcgcactatgcggacctg
atcgaagcgatgtacaccgaattcggcggcgacggcgattaa
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