Rhodothermus marinus DSM 4252: Rmar_0630
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Entry
Rmar_0630 CDS
T01119
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00550
Peptidoglycan biosynthesis
rmr01100
Metabolic pathways
rmr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rmar_0630
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Rmar_0630
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rmr01011
]
Rmar_0630
Enzymes [BR:
rmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Rmar_0630
Peptidoglycan biosynthesis and degradation proteins [BR:
rmr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Rmar_0630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ACY47529
UniProt:
D0MFK2
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All DBs
Position
715957..717804
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AA seq
615 aa
AA seq
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MIDYRVRARIFVGVIALLLGLLVLRLAQMQLWQTELYAGESRSNAVREQRVIPARGAIYD
RNGVLLVDNAPAYSLLITPRYFDPKNIPLLARLLEVPDSVVANRLAQARAWSAYRPSRVF
TDLPFETFSRVVENLYRLPGVQYEIDQRRRYHTPVRAAHALGYVREITRAELEQLRDDGY
AMGDRIGKAGLEKFYEKALRGVPGRAFKLVNIHGQEIKSYRDGAEDVPPISGYDLHLGID
YRVQALAESLFVGKRGAAVALDPNNGEIIALVSMPDFDPEVLSGPIDPATWRYLTTSPEK
PLFNRATMSGVPPGSTWKPFMALVGLQEGVITARSTIYCPGGYMLGGRLFRCHGGAHGSL
DVREAIQLSCNTFFFTVMMRLDVNTLRRWANRFGFGVPAPMDIAEQNPGLIPDSAYYNRR
YPRGWTAGYTINLGIGQGDMTVTPMQLARYVAAIANGGTLYPPHLVRELVHPETGEILKP
QLPPPEHIPIKPEHFQVVREGMRRVMEAGTGRWVQIPGIPSGGKTGTAQAPGGRKDHSLF
IMFAPYDAPKIAIAVFVENAGFGATVAAPIASLMAELYLTGEVATTPQRRYLLEHVLRQR
SQPLDEPSVTQAASR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactaccgggttcgagcgcggattttcgtcggggtcattgccctgctgctgggg
ctgctggtgctgcgtctggcacagatgcagctctggcagaccgagctgtacgcaggcgag
tcgcgcagcaatgcagtgcgcgagcagcgcgtgataccggcccgcggtgccatctacgac
cgcaacggcgtgctgctggtggataacgcgccggcctattcgctgctgatcacgccccgg
tatttcgatccgaaaaacatccccctgctggcccggctgctggaggtgcccgactcggtg
gtggccaatcggctggcgcaggcgcgggcctggagcgcctatcgccccagccgggtcttt
acggacctgccgttcgagaccttcagccgcgtcgtcgaaaatctctaccgcctgcccggg
gtccagtacgagatcgatcagcgccgccgctatcacacgccggtccgcgcggcccatgcg
ctgggctacgttcgcgagatcacccgggccgagctggaacagctccgggacgatggctat
gcgatgggcgatcgcatcggtaaagccgggctcgaaaagttctacgagaaggctctgcgc
ggtgtgccgggacgtgccttcaagctcgtcaacatccacggccaggagatcaagtcctat
cgcgacggggccgaagacgtaccgcccatcagtggctacgatctgcatctcgggatcgac
taccgtgtgcaggcgctggccgagtcgctcttcgtgggcaaacgcggagcggccgtggcg
ctcgatcccaacaacggcgagatcatcgcgctggtgagcatgcccgacttcgatccggag
gtgctctccggaccgatcgacccggcgacctggcgctacctgaccaccagccccgaaaag
ccgctgttcaatcgggccacgatgagcggcgtgccgccgggttcgacctggaagccgttc
atggccctggtggggctgcaggagggcgtcatcacggcgcgtagcacgatctactgtcca
ggtggctacatgctggggggccggcttttccggtgccacggcggcgcgcacggatcgctc
gacgtgcgcgaggcgattcagctttcctgcaacacgtttttctttaccgtgatgatgcgt
ctcgacgtgaacacgcttcgccgctgggccaaccgcttcggattcggtgtgccggcgccc
atggacatcgccgagcagaatccgggcctgatccccgattcggcctactacaaccgacgt
tatccacgcggctggacggccggctacacgatcaacctgggcatcggacagggcgatatg
accgtcacacccatgcagctggcgcgctacgtggcggccatcgccaacgggggtacgctc
tatccgccccatctggtgcgtgagctggtccacccggaaaccggcgaaatcctcaaaccc
cagttgcccccgcccgaacacattcccatcaagccagaacactttcaggttgtgcgggaa
ggcatgcggcgcgtgatggaagcgggcaccggccggtgggtccagatcccgggcattccg
agcggcggcaagacgggcacggcgcaggcgcccggcggccgcaaggaccattcgctcttc
atcatgtttgcaccctacgatgcgccgaagatcgccattgcggtgtttgtggaaaacgca
ggcttcggcgccacggtcgccgcgcctatcgccagcctgatggccgagctgtacctgacc
ggcgaggtcgccactacgccgcagcggcgctacctgctcgagcatgtactccgccagcgg
agtcagccgctggatgaaccctccgtaacgcaggccgcttcccgataa
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