Rhodothermus marinus DSM 4252: Rmar_0872
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Entry
Rmar_0872 CDS
T01119
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
rmr
Rhodothermus marinus DSM 4252
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmr03032
]
Rmar_0872
03036 Chromosome and associated proteins [BR:
rmr03036
]
Rmar_0872
03400 DNA repair and recombination proteins [BR:
rmr03400
]
Rmar_0872
DNA replication proteins [BR:
rmr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rmar_0872
Chromosome and associated proteins [BR:
rmr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Rmar_0872
DNA repair and recombination proteins [BR:
rmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Rmar_0872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_2
HEAT_2
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ACY47769
UniProt:
D0MGY4
LinkDB
All DBs
Position
983290..983685
Genome browser
AA seq
131 aa
AA seq
DB search
MAQRIPTLTKKDVARRVAQLMGEPIYKSEPWVNAVIEALAQLLEEADPEVRIELRDFGVF
EVKRTRAKPKARNPKTNETVFIPSRRKTHFKPSKRLKQVLQRPLIELNYEIPEGSADKYL
EAQAAGKNGAG
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaacgcattcctaccctgaccaagaaagatgtcgcgcgtcgggtggcccagctc
atgggcgaacccatttacaaaagcgagccgtgggtgaacgcagtcattgaggcgctggcg
cagttgctggaagaggcggatcccgaggtgcgtattgagttgcgcgactttggcgtgttc
gaggtcaaacggacgcgggccaagccgaaggcgcgcaatcccaaaaccaacgagacggta
ttcatcccgagccgtcgtaagacgcacttcaagcccagcaagcggctgaagcaggtactg
cagcgtccgctgatcgagttgaattacgagattccggaaggcagcgccgacaaatacctg
gaggcgcaggccgccggaaagaacggcgccggctga
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