Rhodothermus marinus DSM 4252: Rmar_1004
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Entry
Rmar_1004 CDS
T01119
Name
(GenBank) von Willebrand factor type D protein
Organism
rmr
Rhodothermus marinus DSM 4252
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
Hyphal_reg_CWP
fn3
Motif
Other DBs
NCBI-ProteinID:
ACY47898
UniProt:
D0MHE0
LinkDB
All DBs
Position
complement(1142660..1151656)
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AA seq
2998 aa
AA seq
DB search
MVPQYLVQYVTFRPSLTQWLHRLFLLISLSTFPVIAFGQRSTLLQKATNRLQVTIDTTSI
ALHIDPQLTVLIAPADQLPEDPVSSAKIGLLYLAQYDVQGNPLWLNSTLPPGWYRLQLLP
NDSTLTVQLDDTRGHTLSVPASLDTTRPPSPDDAALRVGLSAYADALDFILRLDTYRLLR
FSIPRTASSPPATQTDTLESLSRQALLQTLGHLRQLSAQIDTTRVLLVSTDNVVLAGAPE
VDLETVTDEALQQGISFAVFIAARKYPGHPLGEAVRFEIQRIDSLQYLLRWLDIVGKTVA
RDTLTRQPAQRPLATALHFNATVGTPPEICLKLTDQQLCFNWPLTAEIPQNVAAVPGDGS
IVLTWSAARGALSYNVYVAAEPGVTKANWMDKLEGRKLEDVTSPLVITGLRNDQTYYLVV
TAVGVRGESRESAEVSATPTASPYQAEGPRSGGDLPREPIRLGPPLQGQTLIEHDGTVAI
VIAPQELTMEAGEVRTLGVWIEDTEGNRFAGSPDYLDVVAVGQGWTVQWAEPGNLEVQAP
SGGADIDSLLVIEVRSQLFPDSSYYAGQALVRLVQVRPDVAVIPETQLVWPVTYPLPTDE
ISRRRSLFAEAEWELAERPLFNPLGLMISVAVKEDSTGQYQVGQRIVSKGEGFSLGGQIE
EIIAQRNGYVLLGVRLLPIEELYISYPFPDLLELAREGISPINPNTIQVIWPEELQNSLF
KQDKSKQPCNVKVKVSGKLEVEAEQSGLAGQVGLGYTLKVTCKWEKSSGSVEAGFTLGIS
GALKLSQWDFQKDTEKLYTALVHWDYASISQLLEKVTFESELSATAQGSVSINYQLDLPT
KGPTYLIPIALGTYSYQLFTYTAGLALRITLIDGILDGIKEEILGNTPEKNKTLKILSAE
LNASLSPSANIGKLLRLQSNAANVNISGTFSMNVIDLISYQAESDILNYYKANFKLSPFT
IGPILGFVKTKSATFSPLIVEETKVLFLLGLGLRPYMTISPQGITDYGTIVNQQKGKSNL
TKSRISANTGASAELVFQSELIDFVNQILEKILEKIPDNDFIANIRKITEDGKISLKDIT
FWEKDIGDISLAQPARVDRTQNRVSGILKGYYRWAKQIFLYQLQNNQLIKLGEASPQGNT
FTVSYDPTQLDCSTPTGGLAHLISSTVIPVLNLFTIPLGYSYLGQVDLCNPEFRLEPSRL
EFTGQKGDRLQKITHAIAKDADTVSVSVSDVQGPFTVTPTQATITPPDSAVTLTVQTECT
EDRLGQSLTGNARVTFATNEKQIPRTLSLSLSCNDDEDDPEENPPITGNLPPARGGSWGD
PHITTFDRRGYDFQGIGDYLVSRSTLPGDLFEIQVRHKPWANSNRVSVNAALAANVDGHR
VEVYPDSTSNFLAIWINGQRISGTHWTQALSGGGSVVAQGTQVIISWQDGSALTVRRRDN
IFDYHVLVNGFRRGHLIGLLGDADGNPNNDLRLRDGTVLENPLERDLYLTAFREDWRIPF
GSEESLFSQGPDLYDPLFPDPNNLFTVEDLPEDLRSWAELICRLQGIVTETFLRACILDV
AVTRDPNFALSSLGLDPNVPGVHLQPKTLFVPLGEPDRTRQLGALVTGVEDKTLFWEASE
GVTINPITNNLVKVSVPDVEGVYEVRARLAADSSIQDVAYLLVKPPTYVIWTGEGDGRRM
SDCANWLNNQCPGPNNDVYILVAQPVTIELDGRTVYSLVAQGPITFRGSLTLKSGGELRS
EIALSASQVPASVAALVQERLSVAAKAGGAALAQAAGAAWTGGTITVEQGALQLAGEVTL
GSVTLSGQLVNLGHLKISDITTYDLTLQTNSRLENRGTIEQTGDLYATASSAQLINHGRW
ILMGSSPDFYTNSTYTNPTFQNEGYLAYQGSGTADWYYLHFTNRDSLEVRSGTWRFDYGT
LTLEGGTYIVADSAQLVRNSGTTTLRASQPSPIAGRFLLTGATTVTGDTAHFVGSGLELA
DVTLSGQLVNLGRLKISNITTYDLTLQTNSRLENRGTIEQTGDLYATASSAQLINHGRWI
LMGNNSDFYTNSTYTNPTFQNEGYLAYQGSGTADWNYLHFTNRDSLEVQGGTWRFDYGML
TLEGGTYTVASGALLVRNSGTTTLRASQPSPIAGRFLLTGATTISGDTAHFVGSGLELAD
VTLSGQLVNLGRLKISDITTYDLTLQTNSRLENRGTIEQTGDLYATASSAQLINHGRWIL
MGNNSDFYTNSTSTNPTFQNEGYLAYQGSGTADWNYLHFTNRDSLEVQGGTWRFDYGMLT
LEGGTYTVASGALLVRNSGTTTLRASQPSPIAGRFLLTGATTVTGDTAHFVGSGLELADV
TLSGQLVNLGRLKISNITTYDLTLQTNSRLENRGTIEQTGDLYATASSAQLINHGRWILM
GNNSDFYTNSTSTNPTFQNEGYLAYQGSGTADWNYLHFTNRDSLEVRSGTWRFDYGTLTL
EGGTYIVADSAQLVRNSGTTTLRASQPSPIAGRFLLTGATTVTGDTAHFVGSGLELADVT
LSGQLVNLGRLKISNITTYDLTLQTNSRLENRGTIEQTGDLYATASSAQLINHGRWILMG
NNSDFYTNSTSTNPTFQNEGYLAYQGSGTADWNYLNFTNRDSLEVQGGTWRFDYGMLTLE
GGTYTVASGALLVRNSGTTTLRASQPSPIAGRFLLTGATTISGDTAHFVGSGLELADVTL
SGQLVNLGRLKISDITTYDLTLQTNSRLENRGTIEQTGDLYATASSAQLINHGRWILMGN
NPDFYTNSTYTNPTFQNEGYLAYQGSGTTDWNYLNFTNRDSLEVRSGTWRFDYGTLRLEG
GTYTVASGALLQVNTSTLTLQGLLAATLDGRMVFNAGVVRTPPDTTAATDWPVLNFQGNG
LEWQGGVLEGDTTLTNQGLLRITGPVGLRSHLVNTGTLAVEATFYGRAPALLENRAGARI
EFRGDYHQYRDGGSSYGRMTLQNDGLLIKTAGTGTSTIDACVGGSGQIQGSFNIQCNL
NT seq
8997 nt
NT seq
+upstream
nt +downstream
nt
atggttccacagtatctcgtgcagtacgtgactttccggccttccttaacccagtggcta
caccgactctttttgctgataagcctgagcaccttccctgtcattgcctttgggcagcgc
agcacgctcctgcagaaagccaccaatcgcctgcaggttaccattgatactacgtcgatt
gcactccacatcgatccgcaactgaccgtactcattgcacccgcggatcagctccccgag
gaccccgtatcctctgccaagattggcctgctctacctggcgcagtatgacgtacaggga
aatccgctatggcttaactccacgctgcctccaggatggtatcgcctgcagcttctaccc
aacgactccacccttaccgttcagctcgacgatacccgagggcataccctcagcgtgccc
gcttcactggataccacccgcccgcccagtcccgatgatgcagcgctccgggtaggactg
agcgcctacgccgatgcactcgactttattctgcgcctggacacgtaccgcctgttgcgt
tttagcattccgcgcaccgcctcttcccctccggccacccagaccgacacgctggaatcc
ctctcacgccaggcgctgctgcaaacgctcggccatctacgtcagctaagcgctcagatc
gacaccacgcgcgttctacttgtgtctaccgacaatgttgtgctggccggtgccccggaa
gtagaccttgaaacggtgaccgatgaagcgctccagcagggcatttcgtttgcggtcttt
attgccgctcgtaagtatccaggccatcctttaggggaagctgtccggtttgaaatccaa
cgcatcgacagtctgcagtatctgctgcggtggttggacatcgtcggtaaaaccgtcgct
cgggacacgctaacacgccaaccggctcagcgaccgctggctaccgccctgcacttcaac
gcaaccgtaggcactcccccggaaatctgtctgaagctaaccgatcagcagctgtgcttc
aactggccgctgacggctgaaattccccagaatgtggcggccgtacctggcgatggctcg
atcgtgcttacctggtcagctgcacgcggggccctctcctacaacgtctatgtagccgcc
gaaccgggcgtcaccaaggccaactggatggacaaactcgaaggccgcaaactggaagat
gtgacttcccccctggttatcactggccttcgcaatgaccagacgtattatctggtagta
actgccgtcggagtccggggcgagtcgcgcgagtcggccgaagtatcggctacgccgacg
gcttctccctatcaggcggaaggcccccgcagtggcggggatctacccagagagcccatc
cgactgggtccgcccctgcagggccagacacttatcgagcacgatggcactgtggccatc
gtcatcgctccgcaggagctgaccatggaagcaggcgaggtgcgcacactgggcgtgtgg
attgaagacaccgaagggaaccgctttgcaggaagcccagactacctggacgtagtagct
gtcggacagggatggaccgtacaatgggctgagccgggcaacctggaagtacaggcgcca
tcgggaggtgctgacatagatagcctgctggtcattgaagtccgctcacaactctttcct
gatagctcatactacgccggccaggcgctggtgcgcctggttcaagtcagacctgacgta
gccgtgatccccgaaacacaacttgtctggcccgtcacctatccgctcccgactgacgaa
atcagccggcggcgcagccttttcgcagaggccgaatgggagctggcggaacgtcctctg
tttaatcctctcggcctcatgatcagcgtggccgttaaggaagactcgaccggtcagtac
caggtaggccaacgcattgtcagcaaaggcgaaggattcagcctcggcggacagattgag
gaaatcattgcccaacgcaatggctatgtactgctgggcgtgcgtttattgcctatcgaa
gagctgtacataagctatcccttcccggacctactcgaacttgctcgtgaaggaatttct
ccgattaatcctaataccatccaagttatctggccagaagagttacaaaacagcttgttt
aaacaggataagtctaaacaaccctgcaacgttaaagttaaggtaagcggtaagctggag
gtcgaggctgaacaatccggtcttgcaggccaggtagggctgggatataccctgaaggta
acgtgcaaatgggaaaaaagtagcggcagcgttgaggctggattcacgcttggcatatcc
ggagccctgaaactctcccagtgggattttcaaaaagacaccgaaaagctctacaccgcg
ctcgtccattgggattatgcctccatatcacaactgcttgaaaaggtaacatttgaatca
gaattgtcagctactgcacaaggaagtgtctcgatcaactatcaacttgacctacccaca
aaaggtcctacttacctgatccctatcgccctgggtacctactcttaccagttgtttact
tatacagctggccttgccctccggatcacgctcattgatggcatcctggatggtatcaaa
gaagaaattcttggaaatactcctgaaaaaaataaaacacttaaaatactatccgcagag
cttaacgcttcccttagtccgtctgccaatatcggcaagctacttcgcctccaatcgaac
gcagccaatgtaaatatttcaggtaccttttccatgaatgtgattgatctgatatcctat
caggccgaatcagatattctgaattattacaaagccaacttcaagctttcgccttttacc
atcggccccattctgggctttgtcaaaacgaaaagcgcgaccttctcacccctcattgtt
gaagaaaccaaggtactatttcttcttggcttaggcttgcgtccctacatgacaatatcg
ccacagggaattaccgattatggcacaatcgtaaaccagcagaagggaaagtcgaaccta
acaaaaagccgcatctccgcaaatacaggtgcctcggctgagctggtatttcagagtgaa
cttattgattttgtaaatcaaatattggagaaaatattggagaaaatacccgacaacgac
tttatcgcaaatattcgaaagattacagaagatggcaaaattagtttgaaagatatcaca
ttctgggaaaaagatatcggcgacatttcactggcacagccggctcgggttgatcgcact
caaaatcgggtatccggcatcctgaagggttattatcgatgggctaaacagatctttctc
taccagctacagaataatcagttaatcaagctgggagaggcatcgccgcaggggaatacg
ttcactgtgtcttacgacccgactcaactcgattgctctacaccaacgggagggcttgcg
cacctcatcagttccacagtcattcctgtacttaatctgtttaccattcccctgggctac
tcttacctgggtcaggttgacctctgcaacccggagttccgtctcgaaccctcccgcctt
gagttcacgggccagaaaggcgaccggctccagaaaatcacccacgccattgccaaagac
gccgacacggtgagcgtctcggtctctgatgtacagggacccttcaccgtcacgcccacg
caggccaccatcactccgccggattcggccgtcacgctcaccgtccagaccgaatgcacc
gaagatcgcctggggcagtccttgaccggcaacgccagagttacctttgccacgaatgag
aagcagatcccccgcaccctttcgctctcgctctcctgcaacgacgacgaagacgatccc
gaggagaacccacccattacgggcaaccttccgccagcccgcggcggcagctggggcgat
ccgcacattaccaccttcgaccgccgaggctatgacttccagggcatcggcgactacctg
gtcagccgttcgacgctgcccggcgacctgttcgaaatccaggtgcgccataaaccctgg
gccaacagcaaccgcgtctcggtcaacgccgcgctggctgccaacgtcgatggccaccgc
gtcgaggtctatccggactctacctccaatttcctggccatctggatcaacggccagcgc
atcagtggcacgcactggacgcaagcgctcagtggcggtggcagtgtcgtcgcacagggc
acccaggtgatcatctcctggcaggatggctcggcgctgaccgtgcgccgtcgcgacaat
atcttcgactaccatgtgctggtcaacggctttcgccgcggacacctgatcggcctgctg
ggcgatgccgacggcaaccccaacaacgacctgcgcctgcgcgatggcaccgtgctggaa
aacccgctcgaacgcgacctgtacctgacggccttccgtgaagactggcgcattcccttc
ggctccgaagaaagcctctttagccagggaccagacctttatgatccgctctttcccgac
cccaacaacctgtttaccgtggaggacctgcctgaggatctgcgcagttgggccgagctg
atctgccgcctgcagggcatcgtgaccgaaacgttcctgcgcgcctgcatcctggacgtg
gctgttacacgtgatccgaactttgccctcagctcgctggggctggacccgaacgtgcca
ggcgtgcacctgcaacccaagacgctgtttgtgccgctgggcgagccggaccgcacgcgc
cagctgggcgcgctggtcacgggcgtcgaggacaagacgctcttctgggaggcctccgaa
ggggtgacgatcaacccgatcacgaacaatctggtgaaggtctcggtgccggacgtagaa
ggcgtctacgaggtgcgggcgcgcctggccgccgactcgtcgatccaggacgtggcctac
ctgctggtcaagccgccgacctacgtgatctggaccggtgaaggggatggccgccgcatg
tcggactgtgccaactggctgaacaaccagtgccctggcccgaacaacgacgtctacatt
ctggtggcgcagccggtgacgatcgagctggacgggcgcacggtctattcgctggtggca
caggggccgattacgttccgggggagcctgacgctgaagagcggcggggagttgcgttcg
gagattgcgttgtcggcttcgcaggtgccggcgtcggtggcggcgctggtgcaggagagg
ttgtcggtggcggccaaggcaggtggggcggcccttgcgcaggcggcgggtgctgcctgg
acgggcggcacgatcaccgtggagcagggcgcgctgcagcttgcgggcgaggtgacgctg
ggtagcgtaacgctcagcggccagctggtcaacctcggccacctcaaaatcagcgacatt
accacctatgacctcacactccagaccaacagccgcctcgaaaaccgcggcaccatcgaa
caaaccggcgacctctacgctaccgcctcctcggcccagctgatcaaccacggccgctgg
atcctcatgggcagtagccccgacttctacaccaatagcacctacaccaaccccaccttc
caaaacgaaggctacctcgcctaccagggcagtggcaccgccgactggtactacctccac
ttcaccaaccgcgactcgctcgaagtccgcagcggcacctggcgcttcgactacggcacg
ctcacgctcgaaggcggaacctacatagtcgccgacagcgcccagctcgtccgaaacagc
ggcaccaccacactgcgcgcctcgcagccttcccccatcgccggacgcttcctcctgacc
ggagccaccaccgtcactggcgacacagcccactttgtcggcagtggtctggagctcgcc
gacgtaacactcagcggtcagctggtcaacctcggccgcctcaaaatcagcaacattacc
acctatgacctcacactccagaccaacagccgcctcgaaaaccgcggcaccatcgaacaa
accggcgacctctacgctaccgcctcctcggcccagctgatcaaccacggccgctggatc
ctcatgggcaacaactccgacttctacaccaatagcacctacaccaaccccaccttccaa
aacgaaggctacctcgcctaccagggcagtggcaccgccgactggaactacctccacttc
accaaccgcgactcgctcgaggttcagggtggtacctggcgcttcgactacggcatgctc
acgctcgaaggcggaacctacacggtcgccagtggggccctgctcgtccgaaacagcggc
accaccacactgcgcgcctcgcagccttcccccatcgccggacgcttcctcctgaccgga
gccaccaccatcagtggcgacacagcccactttgtcggcagtggtctggagctcgccgac
gtaacactcagcggtcagctggtcaacctcggccgcctcaaaatcagcgacattaccacc
tatgacctcacactccagaccaacagccgcctcgaaaaccgcggcaccatcgaacaaacc
ggcgacctctacgctaccgcctcctcggcccagctgatcaaccacggccgctggatcctc
atgggcaacaactccgacttctacaccaatagcaccagcaccaaccccaccttccaaaac
gaaggctacctcgcctaccagggcagtggcaccgccgactggaactacctccacttcacc
aaccgcgactcgctcgaggttcagggtggtacctggcgcttcgactacggcatgctcacg
ctcgaaggcggaacctacacggtcgccagtggggccctgctcgtccgaaacagcggcacc
accacactgcgcgcctcgcagccttcccccatcgccggacgcttcctcctgaccggagcc
accaccgtcactggcgacacagcccactttgtcggcagtggtctggagctcgccgacgta
acactcagcggtcagctggtcaacctcggccgcctcaaaatcagcaacattaccacctat
gacctcacactccagaccaacagccgcctcgaaaaccgcggcaccatcgaacaaaccggc
gacctctacgctaccgcctcctcggcccagctgatcaaccacggccgctggatcctcatg
ggcaacaactccgacttctacaccaatagcaccagcaccaaccccaccttccaaaacgaa
ggctacctcgcctaccagggcagtggcaccgccgactggaactacctccacttcaccaac
cgcgactcgctcgaagtccgcagcggcacctggcgcttcgactacggcacgctcacgctc
gaaggcggaacctacatagtcgccgacagcgcccagctcgtccgaaacagcggcaccacc
acactgcgcgcctcgcagccttcccccatcgccggacgcttcctcctgaccggagccacc
accgtcactggcgacacagcccactttgtcggcagtggtctggagctcgccgacgtaaca
ctcagcggtcagctggtcaacctcggccgcctcaaaatcagcaacattaccacctatgac
ctcacactccagaccaacagccgcctcgaaaaccgcggcaccatcgaacaaaccggcgac
ctctacgctaccgcctcctcggcccagctgatcaaccacggccgctggatcctcatgggc
aacaactccgacttctacaccaatagcaccagcaccaaccccaccttccaaaacgaaggc
tacctcgcctaccagggcagtggcaccgccgactggaactacctcaacttcaccaaccgc
gactcgctcgaggttcagggtggtacctggcgcttcgactacggcatgctcacgctcgaa
ggcggaacctacacggtcgccagtggggccctgctcgtccgaaacagcggcaccaccaca
ctgcgcgcctcgcagccttcccccatcgccggacgcttcctcctgaccggagccaccacc
atcagtggcgacacagcccactttgtcggcagtggtctggagctcgccgacgtaacactc
agcggtcagctggtcaacctcggccgcctcaaaatcagcgacattaccacctatgacctc
acactccagaccaacagccgcctcgaaaaccgcggcaccatcgaacaaaccggcgacctc
tacgctaccgcctcctcggcccagctgatcaaccacggccgctggatcctcatgggcaac
aaccccgacttctacaccaatagcacctacaccaaccccaccttccaaaacgaaggctac
ctcgcctaccagggcagtggcaccaccgactggaactacctcaacttcaccaaccgcgac
tcgctcgaagtccgcagcggcacctggcgcttcgactacggcacgctcaggctcgaaggt
ggcacctatacggtggccagtggggccctgctccaggtcaataccagcacgctcacgctt
cagggcctgctcgccgccacgctcgatggccgcatggtcttcaacgctggcgtggtgcgc
accccgcctgataccaccgccgccaccgactggccagtcctcaacttccagggcaacggc
ctcgaatggcagggcggcgtcctcgaaggcgataccacgctgaccaaccagggcctgctg
cgcattaccggaccggtcggcctgcgctcgcatctggtcaacaccggcacgctggccgtc
gaagccaccttctacggccgcgcgcccgccctgctggaaaaccgcgctggggcccggatc
gagttccgcggcgactaccaccagtatcgcgatggcggcagcagctacggccgtatgaca
ctgcagaacgacgggctgctcatcaagacggccggcacgggcaccagtacgatcgatgcc
tgtgtgggcggcagcggtcagatccagggcagcttcaacattcagtgtaacctgtaa
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integrated database retrieval system
