KEGG   Rhodothermus marinus DSM 4252: Rmar_1093
Entry
Rmar_1093         CDS       T01119                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rmr  Rhodothermus marinus DSM 4252
Brite
KEGG Orthology (KO) [BR:rmr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rmr02048]
    Rmar_1093
Enzymes [BR:rmr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Rmar_1093
Prokaryotic defense system [BR:rmr02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Rmar_1093
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD DUF6611 GrpE HSDR_N_2 T1RH-like_C DUF2334 ERAP1_C
Other DBs
NCBI-ProteinID: ACY47984
UniProt: D0MHM6
LinkDB
Position
1263188..1266112
AA seq 974 aa
MTLASERRIVQNPFIRYAEEAGWQYLSPEEALRLRGGEDSPILHTVFIEQLQRLNPGIVD
SVTKAEEVFNRLIRVRPNIEGNLEAWEYLKGMKTVFVEAERRERNLRLLDTENIEANRFH
VTDEFRFVSGHVAIRADVVLFVNGIPVIVVETKAATRPEGIAEAFDQIRRYHQEAPELMA
QAQIFALTHLVRFFYGATWSLSRKTLFNWREDLERQRAVSQQPADFETLVKSFVAPRRVL
RVLTEYILFTRRDGELSKVVLRPHQMRATEKVIARARDPQRRRGLVWHTQGSGKTYTMIT
VAKLLLEDPRFQNPTVLMIVDRNELQQQLFQNLESVGFGRVHVARSKRHLRELLRQDTRG
LIVSMIHKFDKADANFNTRANIFVLIDEAHRSTGGDLGNYLMGALPNATFIGFTGTPIDK
SAHGKGTFKTFGGDDPGGYLDKYAIRESIEDGTTVPLHYQMAPNDLIVDRSAMEAEFWKA
AALEGVTDVEELNRVLDRAVTLKNLLKNRQRVERIASFVAKHYRTYVEPMGYKAFLVAVD
REACGLYKEALDHHLPPEYSQVVISRGHNDPPELKRWHLSDEEEAAVRKAFRKPDQPPYI
LIVTEKLLTGYDAPILYAMYLDKPMRDHVLLQAIARVNRPYEDDEGRRKTNGLIVDFVGI
FDNLERALAFDSQDVEGVVEGLDVLKERFEILMQQGREAYLPLRAGKSEDKAAEAVLEHF
RDREAREAFYAYFRELQEVYEILSPDPFLRPFLEDYRALVAMYRLLRSAYEPHVSVDKSF
LRKTAEIVQQHTTTQAVHEPQATYEIGAGALLALVAQDKPDAVKVFNLLRALHRLVEAQG
KEQPHLIPIGERAEAIRQAYEARQMNSQQALEALNDLVRRLQEAEEEWRESDLTPEAFAV
AWWLRVQKEMDAPQAHRLAAQIEPAFQAFPHWATSQYQERELRKQLYKILVEAGVKEVVA
WADEVLTLLRGISS
NT seq 2925 nt   +upstreamnt  +downstreamnt
atgactctcgccagcgaacgccgcatcgtccaaaaccccttcattcgctacgccgaggag
gccggctggcagtatctatctccggaggaagccctgcggctccgcggcggagaggatagc
cccatcctgcacaccgtttttatcgagcaactgcagcgcttaaaccccggaattgtggat
tcggtgaccaaggccgaggaggtcttcaaccgtctcatccgcgtccggcctaacatcgaa
ggtaacctggaagcctgggagtacctcaaggggatgaaaaccgtcttcgtcgaagccgag
cgccgcgagcgcaacctgcgcctgctcgatacggagaacatagaggccaatcgcttccat
gtcaccgacgagtttcgcttcgtcagcggccacgtcgccatccgcgcggatgtggtgctc
ttcgtcaacgggatccccgtgatcgtggtggaaaccaaggcggccacccgccccgaaggc
attgccgaagccttcgaccagatccgccgttaccaccaggaagcgcccgaactcatggcc
caggcgcagatcttcgccctcacccacctggtcaggtttttctacggtgccacctggagc
ctatcgcgcaaaactctcttcaactggcgggaagatcttgagagacagcgcgccgtgtcc
caacaacctgccgatttcgaaaccctggtcaaatccttcgtcgccccacggcgggtgctg
cgcgtgctcaccgaatacatcctcttcacccgccgtgatggcgagttgagtaaagtggtc
ctgcgcccccaccagatgcgggccaccgaaaaggtgattgcccgcgctcgggacccgcag
aggcgccgcggcctggtctggcacacccagggttcgggcaagacttacaccatgattacg
gtggccaaactactgctggaggacccgcgcttccagaaccccaccgtcctcatgatcgtg
gaccgcaacgaactccagcagcaactcttccaaaacctggagtccgtcggctttggccgg
gtgcatgtggcccggagcaaacgtcatctgcgcgaacttttgcgccaggacacccgcggc
ctgatcgtgtccatgatccacaagttcgacaaggccgacgcgaacttcaacacccgcgcc
aacatcttcgtgctcatcgacgaagcccaccgctccaccggcggcgacctgggcaactac
ctgatgggcgccctgcccaacgctaccttcatcggcttcaccggcacgcccatcgacaaa
agcgcccacggcaagggcaccttcaagaccttcggcggggacgaccccggcggctatctg
gacaaatacgccattcgcgagtccatcgaggacggcaccaccgtgcccctgcactaccag
atggcccccaacgacctgatcgtggaccggagcgccatggaagcggagttttggaaggcc
gccgccctggagggagtgaccgatgtggaagaactcaaccgtgtcctggaccgggccgtg
accctcaagaacctgctcaagaaccgccagcgcgtggagcgcattgcctcctttgtggcc
aagcactaccgcacctatgtggagcccatgggctacaaagcctttctcgtcgccgtggac
cgcgaggcctgcggcctgtacaaggaagccctggatcaccacctgccgccggaatacagc
caggtggtcatcagccgagggcataacgacccgcccgaactcaagcgctggcatctgagc
gatgaggaagaggcagccgtgcgcaaagccttccgcaagcccgatcagcctccctacatc
ctcatcgtcaccgaaaagctgctcaccggctacgacgcgcccatcctctacgccatgtac
ctcgacaagcccatgcgcgaccatgtgctcctgcaagccattgcgcgggtcaaccgtccc
tatgaggacgacgagggccggcgcaagaccaacggcctgatcgtggacttcgtaggcatc
ttcgacaacctggagcgggccctggccttcgattcccaggatgtggaaggggtggtggaa
gggctggatgtgcttaaggagcgctttgagatcttgatgcaacaagggcgggaggcgtat
ctacccctgcgtgcaggcaaaagcgaagacaaggcggccgaggccgtgctggagcacttc
cgcgaccgggaggcgcgcgaggctttctacgcctactttcgcgaactgcaggaggtgtac
gaaatcctttcgcccgatcccttcctgcgccctttcctggaagactatcgcgccctggtg
gcgatgtaccgtctgctgcgcagcgcctatgagccgcacgtgtcggtagacaaatccttc
ctgcgcaagacggccgagatcgtccaacaacacaccaccacgcaggccgtccacgagccc
caggccacctacgagatcggcgccggtgcgctgctggcgctcgtcgctcaggacaaaccc
gacgcggtcaaggttttcaacctgctccgggcactgcatcgcctggtggaagcccaaggg
aaggaacagccccacctgatccccatcggcgagcgggccgaagccatccgtcaggcttac
gaagcgcggcagatgaacagccagcaggccttggaagccctgaacgacctggtgcgccgc
ctgcaagaagccgaggaagagtggcgcgagagcgaccttacaccggaagcctttgccgtg
gcctggtggttgcgggtgcaaaaggagatggacgcaccgcaagcccatcgtctggccgcc
caaatcgaaccggccttccaggccttcccccactgggccaccagccagtaccaggagcgc
gagctgcgcaagcaactctacaaaatcctggtcgaggcgggagtcaaggaagtggtcgcc
tgggccgacgaagtgttgaccctgttacgggggatatcctcatga

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