Rhodothermus marinus DSM 4252: Rmar_1166
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Entry
Rmar_1166 CDS
T01119
Name
(GenBank) Heparinase II/III family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
rmr
Rhodothermus marinus DSM 4252
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Rmar_1166
Enzymes [BR:
rmr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
Rmar_1166
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Gene cluster
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
Motif
Other DBs
NCBI-ProteinID:
ACY48056
UniProt:
D0MHU8
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Position
1358109..1360334
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AA seq
741 aa
AA seq
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MMRRTLLLLGLMLGLQGTAFLEVLAQPRHPRVFISAEEAAALRENAERYTLLRTTLARVR
AEMEEVLAKPIEIPPPGEAGGYEHERHKQNYREMFKAGLLYQITGDERYARFVRDMLMGY
AAMYPELGPHPRSERQIPGKLFHQLLNECVWLVHTIVAYDAIYNWLSEADRAHIEASVFR
PMASWIMNEGAYEFNRIHNHGTWAVAAVGMTGYVIGEPDWVEKALYGSNKEGKSGFYAQL
DQLFSPDGYYMEGPYYARYALWPFFFFAEAIERYEPERGIYAYRDSILKKALYATVQTAF
PDGVLPPLNDASLTMDIRAPGVVLATDVVFARYEGDPALLGVAHEQGQVVLNGAGLAVAK
AYDEASEVPRMTWPSVEFTDGADGRRGGIGFLRTGVGRDQTVVLMKYGVHGLGHGHFDKL
HFMLYDNGRQVIRDYGFARFINVEPKYGGRYLPENESYAKQTIAHNTVVVDETSQNRADR
DEAEAMSGQRHFFDGRGGPVQAMSARANGYWPGVNMQRTLLLVEDARLDYPVVVDLFRVT
ADTMHQYDYPLHFLGQPIWDNLGIRGYPDQLRPLGTDFGYQHIWEEARARTDSVVQFTWL
DGSRYYTWTVAAAPATEVILGRIGAGDPRFNLRREPMILVRRRGRDHLFASVIEPHGYFN
EAREISLRARPQVQAVRVIGHSEAASVVEVVGKGGWTWTIMVTNGPADPDARHTVTFGNR
TFSWTGNYAVEGVVVASDSRR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgacgcactctactgcttctggggttgatgctgggcctgcagggcacggcattt
ctggaagtgctcgcgcagccgcggcatccccgtgtgttcatctcggccgaagaggcggcg
gcacttcgggagaatgccgagcgctacacgctgctcaggaccacgctggcgcgcgtgcgg
gccgagatggaagaggtcctggcgaagcccatcgaaattccgccgcccggcgaagccggt
ggttacgagcacgagcggcacaagcagaactaccgcgaaatgttcaaagccgggctgctc
taccagatcaccggcgacgaacgctatgcccggttcgtgcgggatatgctgatgggctat
gcggccatgtatcccgagctggggccgcatccgcgcagcgagcgccagattcccggcaag
ctcttccaccagctgctcaacgagtgcgtctggctggtgcacaccattgtggcctacgac
gcgatctacaactggctgagcgaggccgatcgggcccacatcgaggccagcgtgtttcgt
ccgatggcctcctggatcatgaacgaaggggcctacgagttcaaccgcatccacaaccac
ggcacctgggcggtagccgcggtgggcatgaccggctacgtgatcggcgagccggactgg
gtggaaaaggcgctttacggcagcaataaagagggaaaaagcgggttttatgcgcagctc
gatcagctcttctcaccggacggctactacatggaaggcccctattacgcccgctatgcg
ctctggcctttcttcttctttgccgaggcgatcgagcggtacgagcccgagcgcggcatc
tacgcctatcgcgacagcatcctgaaaaaagccctttatgccacggtgcagaccgccttt
ccggatggcgtcctgccgccgcttaacgatgcctcgctcacgatggacattcgggcgccg
ggcgtcgtgctggccaccgatgtggtgtttgcccgctacgagggcgatccggccctgctg
ggcgtggcgcacgaacagggccaggtggtgctcaacggcgcggggctggccgtggcgaaa
gcctacgacgaggcgtccgaagtgccccggatgacgtggcccagtgtcgagttcaccgac
ggggccgacggccggcgaggtggtatcggctttctgcgtaccggcgtgggccgcgaccag
accgtcgtgctcatgaagtacggcgtgcacggactggggcacggccacttcgacaagctg
cacttcatgctctacgacaacggccgccaggtcatccgagactacggctttgcccggttc
atcaacgtggaacccaagtacggcggccgctacctcccggaaaacgaaagctacgccaag
cagaccatcgctcataacacggtggtggtggacgagaccagccagaaccgggccgatcgg
gacgaggccgaggccatgtcgggccagcggcactttttcgacggcaggggcggccccgta
caggccatgagtgcgcgtgccaacggctactggccgggcgtgaacatgcagcggacgctg
ctgctcgtcgaagatgcgcggctggactatcccgtggtggtggacctcttccgggtgacg
gccgacaccatgcaccagtacgactatcccctgcactttctggggcaacccatctgggac
aacctgggcattcggggctaccccgatcagctcaggccgctggggaccgacttcggctac
cagcacatctgggaggaggcgcgagcgcgcaccgatagcgtcgtgcagtttacctggctc
gatggctcgcgctactacacctggacggtggcggccgccccggccacagaggtcatcctg
ggacgcatcggcgctggcgatccccgcttcaatctacgccgggaaccgatgattctggtg
cgccgccgcggccgggaccatctgttcgccagcgtcatcgagccgcatggttacttcaac
gaggcgcgcgagatcagcctaagggccaggcctcaggtgcaggcggtacgggtgatcggc
cacagcgaggcggccagtgtggtggaggtggtcgggaagggcggctggacctggaccatc
atggtgacgaacgggccggccgatcctgacgcccgccataccgtcacgttcggcaaccgc
accttctcgtggacgggcaattatgcggtggagggcgtggtcgttgccagtgattcccgc
cgttaa
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