Rhodothermus marinus DSM 4252: Rmar_1257
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Entry
Rmar_1257 CDS
T01119
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
rmr
Rhodothermus marinus DSM 4252
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmr03400
]
Rmar_1257
DNA repair and recombination proteins [BR:
rmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rmar_1257
Archaeal homologous recombinant proteins
Rmar_1257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
Rad50_zn_hook
ATG16
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ACY48147
UniProt:
D0MI39
LinkDB
All DBs
Position
1470151..1473210
Genome browser
AA seq
1019 aa
AA seq
DB search
MVPVALRLKNFMSYGEAAPVLDFEQFQVACLSGNNGQGKSALLDAITWALWGEARKTSDS
RKPDEHLLRVGAQQMEVEFTFDLEGQRYCVLRRYTRSSSGKTSKSELELQVYEPETGTYR
ALTASSVSETQERLNQLLGLDYQTFINASFLLQGRADEFTRKKPSERKEILARILNLDRY
ERLAELAREEVREAKARAEQIERQLEQIQEALQEESALKTRHEALRERRHALEAERETRQ
RHLQTLQEQRVRLEENRRRLEELQEQERQQTARLQEERERLVRLEAELQDLEQLLARREE
IEQAHARERTLQEERRQLEAKREQYWGIQKQLDQVQSELERQRSELEKKLALVRKEQEHV
QRQLQELTTRLQERPRIAQRLKAAEQARQEMARLEQQRQQRSALEEEIRHVSETLLAAQK
ELEGQLRSLQRQLEQEADVPEQLAALEARCRELEQQEARYRALQEELERLKETGQGKKAA
IEALQARLQELERQQQDLQQRYDTFRQAEADVCPVCGSELGPEHREEVERHYEEQLEELA
RGLDEGRRRLAALEQEREALRQQYIARLSEAKRLEKAPEELARARAQLEELQRRNARREA
LARQLSALQTQLEQRAFAQEQRRRLEELHRKLEAIPFDEQKFEVLRQQAAEAASLRERLQ
ELETLQGRRESLESEQRRLAQLEQQYRQELDQGPALQQLLQRKRALQEKLQAIGFDPARL
QQVQQELEALGDVGAQVHRLLHAEENLKKGRQERETLQRRIRQEEQALERLQTQLQQLRQ
ELEDLPRVQAACEEARQQLAATEEALRGVQQEIGECQARMEQLQALRAQRKQLRQELESV
RHRERLHRHLQQAFGKHGIPSLIIEQTLPELEARANELLERLTDGRMHVYLRTQRAKKSG
GTKETLDIIITDEQGAARPYETFSGGEAFRVDFALRLALAQLLAERSGVRVRTLVIDEGF
GTQDPQGLQHLVEAIQAVQSDFDKILVITHLSELKQVFPVRIEVEKDPVEGSRFEVIGV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggtaccggtcgcgttgcgcctcaagaacttcatgagctacggggaggcggcgcccgtg
ctcgatttcgagcagtttcaggtggcctgtctgtcgggcaacaacggccagggtaagtcg
gcgctgctggacgcgatcacctgggcgctctggggcgaggcgcgcaagacgagcgacagc
cggaagcccgacgagcacctgctgcgcgtgggagcgcagcagatggaggtggagttcacc
ttcgatctcgaaggccagcgctactgcgtgctccggcgctacacgcgctccagctccggc
aaaaccagcaagtcggagctggagctgcaggtgtacgaaccggagaccggcacctaccgg
gcgctgacggcatcttcggtttccgaaacgcaggaacggctcaatcaactgctggggctc
gactatcagacgttcatcaacgcctcgtttctgctgcaggggcgggccgacgagttcacg
cgcaaaaaacccagcgagcgcaaggagatcctggcccgcatcctgaacctggaccgctac
gagcggctggccgaactggcgcgggaagaggtgcgtgaggcgaaggcgcgggccgagcag
atcgagcgccagttggagcagattcaggaagcgttgcaggaggagtccgcgctgaagacc
cggcacgaagcacttcgcgagcgccgccacgcgctggaggccgagcgtgaaacccgccag
cggcacctgcagacgcttcaggagcagcgtgtacgtctggaagaaaaccgccgccgcctt
gaagaactgcaggagcaggagcgtcagcagacggcccgcctgcaggaggaacgcgagcgg
ctggtccgactggaggccgagctgcaggacctggagcaattgctggcgcgacgtgaggag
atcgaacaggcccatgcccgcgagcgaaccctgcaggaagagcgccgccagctcgaagca
aagcgcgagcagtactggggcatccagaagcagctggatcaggtccagagcgaactggaa
cgccagcggagcgagctggaaaagaagctggcgctggtccgcaaagagcaggagcatgtg
cagcgacagctccaggagctgaccacgcgcctgcaggagcggccccggatcgcgcagcgc
ctgaaggcggccgagcaggcacgtcaggaaatggcccggctggagcagcagcgtcagcag
cgcagcgcgctggaggaggaaatccgccacgtctccgaaacgctgctggccgcgcagaag
gagctcgaaggacaattgcggtcgctgcagcgccagctggagcaggaggccgacgtgccg
gagcagcttgccgcgctggaagcccggtgccgtgagctggagcagcaagaagcccgctac
cgggcgctgcaggaagaactggaacgactgaaggagacggggcagggcaagaaggcggcg
atcgaagcgctgcaggcgcggctgcaggagctggagcgacagcagcaggacctgcagcag
cgctacgatacgttccggcaggccgaagcggacgtgtgtccggtctgtggcagcgagctg
gggcccgagcaccgggaagaggtcgagcgccactacgaagagcaactggaggagctggcg
cgtggactggacgaagggcgccggcggctggccgcgctggagcaggagcgagaagcgctc
cggcagcagtacatagcccgactttcggaagcaaagcggttggagaaggcgcccgaagag
ctggcgcgtgcgcgcgcgcagctggaagaactgcagcggcgtaatgcccgacgggaggcg
cttgcgcgtcagctatcggcacttcagacacaacttgaacagcgcgcctttgcgcaggag
caacggcgtcggctggaggagctgcaccggaagctggaggccattccattcgacgagcaa
aaatttgaggtgctacggcagcaggcggccgaggccgcttcgctccgcgaacgactccag
gagctggagacgctgcagggacggcgggaaagcctggaaagcgagcagcggcggctggcg
caactggagcagcagtaccgtcaggaactggatcaggggccggctttgcaacagctcctg
cagcgcaagcgcgcacttcaggaaaagcttcaggcgatcggcttcgatccggcacgtctg
caacaggtgcagcaggagctggaggcgctgggcgacgtcggcgcccaggtgcatcgcctg
ctccatgcggaggaaaacctgaagaaaggccggcaggaacgagagacgttgcagcggcgc
atccgacaggaggaacaggcgctggagcgattgcagacgcagctgcagcaactccggcag
gagctggaagatcttccccgcgtgcaggcggcctgcgaagaagcccggcagcaactggcg
gccacagaggaggcgctacggggcgtgcagcaggagatcggtgaatgccaggcgcgtatg
gagcaattgcaggcgcttcgcgcgcagcgcaagcaactccggcaggagctggaatcggta
cggcatcgggagcggctgcaccgacatctgcaacaggccttcggcaagcacggcatccct
tcgctgatcatcgaacagacgcttcccgagctggaggcccgcgccaacgaattgctcgaa
cggctgaccgatggccgcatgcacgtttacctgcgcacgcagcgcgccaaaaaatccgga
ggcacgaaagaaacgctcgacatcatcatcaccgacgagcagggggcggcccgtccctac
gagaccttctccgggggcgaggctttccgggtcgattttgcgctgcggctggcgctggcc
cagctgctggccgagcgcagcggcgtgcgcgtgcgcacgctggtcatcgacgagggcttc
ggcacgcaggacccgcagggactgcagcatctggtggaggccattcaggccgtacagtcc
gatttcgacaagattctggtgatcacgcacctgagcgaactcaagcaggtgtttccggtg
cggatcgaggtcgagaaagacccggtcgagggctcgcgcttcgaggtgatcggcgtgtga
DBGET
integrated database retrieval system
