Rhodothermus marinus DSM 4252: Rmar_1272
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Entry
Rmar_1272 CDS
T01119
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rmr
Rhodothermus marinus DSM 4252
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmr03032
]
Rmar_1272
03400 DNA repair and recombination proteins [BR:
rmr03400
]
Rmar_1272
Enzymes [BR:
rmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rmar_1272
DNA replication proteins [BR:
rmr03032
]
Prokaryotic type
DNA Topoisomerases
Rmar_1272
DNA repair and recombination proteins [BR:
rmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rmar_1272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Nnf1
DUF3782
Motif
Other DBs
NCBI-ProteinID:
ACY48162
UniProt:
D0MI54
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Position
1490878..1493205
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AA seq
775 aa
AA seq
DB search
MPVVEVIPLHETTRERYLNFALSVITSRALPDIRDGLKPVQRRILYAMFQHLRLYPDARY
RKSATIVGEVMGKYHPHGDAAIYEAMVRMAQDFSLRYPLVDGHGNFGSIDGDAAAAMRYT
EARLRPLAMQLLEELRRQTVPMRPNFDGTLFEPVVLPARFPNLLVNGASGIAVGMATNIP
PHNLGEVIDALIYLIDVPNAPLETILERFIQGPDFPTGGRVLNTREELLEIYRTGEGPIE
LRGEYKLEGKTRIVITSIPYGIAKADLVEKIAEHIAAGKVPQLSDVRDESTDEVRIVLEL
RRGADPEAAMAYLFRHTPLQTRFHVNLTCLVPTANPEVAAPRKVDLMTMLRAFLEFRMEV
VVRRLRYDLEQLERRIHILRGFEKIFGALDEAIRIIRAARDKADAAQRLMHRFQLDDVQA
DAILETKLYKLSRLEIEAIRQELEEKERQAAELRALLADEAARWGLIREELKAIKKQFAD
ARRTVIAGPDEGFEYNQEAYIVDEDVYVIVTRDGWVKRQRSYTDVQSIRVREGDTVGWVL
PGSTRATVGFFTNYGRCYTTRIDSLPSTTGYGDPVQKLFDFSDRERVVGVVVFDERALPR
PVPEPEVEPALFENGEQEAPRVHVVAVTRKGQTLRIPIDGFREPSTKNGRLFMRLEKGDE
VLGVEVAAGDENVCLASREGYVLIFPVHQIPPVKSAAKGVIAMRLGRGDEVLGFTLASAA
REGLEVETSRGRREIVRTTKFEVSRRGNRGRQIIRRGQLVRVIPAPVEIRLNGQG
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgccggttgtagaagtcattcccctgcacgagacgacgcgggagcgctacctgaacttc
gcgttgtccgttattacaagccgcgcgttgccggacatccgggacggtctcaagcccgtc
cagcggcgcattctgtatgcgatgtttcagcacctgcgtctctacccggacgcccgctat
cgcaaaagcgccacgatcgtcggagaggtgatgggtaaataccacccgcacggcgacgcg
gccatctacgaagccatggtgcgcatggcgcaggacttctcgctgcgctatccgctggtg
gacgggcatggcaacttcggttcgatcgacggcgacgcggcggccgccatgcgctacacc
gaggcgcggctgcgtccgctggccatgcagctcttggaggagctgcggcgccagaccgtc
cccatgcggcccaacttcgacggtacgctcttcgagccggtggtccttccggcccgcttc
ccgaacctgctcgtcaacggtgccagcggcatcgcggtgggcatggcgaccaacatcccg
ccccacaacctgggcgaggtaatcgatgcgctcatctatctgatcgacgtgcccaacgcg
ccgctggagaccatcctggagcggttcatccaggggcctgacttcccgaccggcggccgg
gtgctcaacacgcgcgaggagttgctggaaatctaccgcacaggcgaggggcccatcgaa
ctgcgcggtgaatacaaactggagggcaagacgcgcatcgtcattacgtcgatcccgtac
ggcatcgccaaggccgacctggtcgagaagatcgccgagcatatcgcggccggcaaggtg
ccccagctttcggacgtgcgggacgaatcgaccgatgaggtgcgcatcgtgcttgagctg
cgccggggtgccgatccggaggcggccatggcctacctgttccgacacacgccgcttcag
acacgctttcacgtgaacctgacgtgtctggtaccgacggccaacccggaggtcgccgcg
ccgcgcaaggtcgatctaatgaccatgctccgggcctttctcgaattccgcatggaagtg
gtggtacggcgactgcgctacgatctggagcaacttgagcgccgcatccacatcctgcgc
ggattcgagaaaatcttcggggcgctggacgaagccatccggatcatccgcgccgcgcgc
gacaaggccgacgccgcccagcgcctgatgcaccgcttccagctcgacgacgtgcaggcc
gacgccatcctcgaaacgaaactctacaagctctcgcggctggagatcgaagcgattcgt
caggaactggaagaaaaagaacgccaggcggccgaactgcgggcactgctggccgacgaa
gccgcccgctggggactcatccgcgaggaattgaaggccatcaaaaagcaatttgccgac
gcgcggcgcaccgtcatcgccggacccgacgagggcttcgaatacaaccaggaagcctac
atcgtggacgaagacgtgtacgtcatcgtcacgcgggacggctgggtcaagcgccagcgc
tcctacacggacgtgcagagcatccgcgtccgcgaaggcgatacggtgggctgggtgctt
cctggttcgacccgtgccaccgtcggtttctttacgaactacggccgctgctacaccacg
cgcatcgactcgcttcccagcacgacggggtacggcgatccggtgcagaagctgttcgac
ttttcggaccgggagcgcgttgtcggcgtggtggtcttcgacgagcgggcacttccccga
ccggttccggagcccgaagtcgaaccggcactgttcgagaacggggagcaggaagcgccc
cgtgtgcatgtggtggccgtcacccgtaagggccagacgctccgcatccccatcgatggc
ttccgggagccgtccacgaaaaatggccgccttttcatgcgcctggagaaaggcgacgaa
gtgctgggtgtcgaggtagcggccggcgacgagaacgtctgtctggcttcacgcgagggc
tacgtgctcatcttccccgtgcaccagattccgccggtcaagtcggcggccaaaggcgtg
atcgccatgcgtctgggcaggggcgacgaggtgctgggcttcacgctggcttcggccgcc
cgcgaggggctggaggtggagaccagccgcggccggcgcgagatcgtccgcaccacgaag
ttcgaggtgtcgcgccggggtaaccggggccggcagatcatacggcgcggccagctcgtc
cgggtcatcccggcaccggtggaaattcgactgaacggacagggataa
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