Rhodothermus marinus DSM 4252: Rmar_1314
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Entry
Rmar_1314 CDS
T01119
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rmar_1314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmr03019
]
Rmar_1314
03016 Transfer RNA biogenesis [BR:
rmr03016
]
Rmar_1314
Enzymes [BR:
rmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Rmar_1314
Messenger RNA biogenesis [BR:
rmr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rmar_1314
Transfer RNA biogenesis [BR:
rmr03016
]
Prokaryotic type
tRNA degradation factors
Rmar_1314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KORA
Motif
Other DBs
NCBI-ProteinID:
ACY48204
UniProt:
D0MI96
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All DBs
Position
1540493..1542811
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AA seq
772 aa
AA seq
DB search
MMTQTTIHEIEFAPGKSLRLETGRLAKQANGAVVVRQGDTMVLCTAVLADEPREGQSFFP
LTVEYREKFAAGGRIPGGFIKREGRPTDKEILSSRLIDRAIRPLFPDGFFHEVQIICYVI
SADDRYDADVLAGTGASAALLLAGAPFDGPIAEVRVGRVDGQFVVNPTLKELEQSDINLV
VAGKEDAIVMVEGEMKEVSEEDMLEALEVAHEAIRKLCRGQLEFVAAHGRPEPFPYQTTT
LPEELVARVRELAVPKLEAHLRAPYDKQTFYEGLEQIGEETVAALLGTTDAEGNQVLAEA
TPEGWTADQIRKAVSQVTREVMRQMILREGRRIDGRSLDEIRPIWMEVGYLPRVHGSAIF
TRGETQVLASVTLGTSKDVQMIDQIFVQGDKRFFLHYEFPPFCTGEIRFLRGPGRREIGH
GYLAERALAAMLPDESSFPYTIRVNADVLESNGSSSMASVCAGSLALMDAGVPVKKHVAG
VAMGLIKEGDQVAILTDILGTEDHLGDMDFKVAGTRDGITACQMDIKIGGLTREIMQRAL
EQARRARMYILDLMEQTIEAPRPELSPYAPRLTQITIDPEFIGAVIGPGGRVVQGIQRET
NTTIEIEERDGVGVVTVAATNQENAQRAIEMIKQIVAVPEVGAEYEGIVRSIQSFGAIVE
IMPGKEGLLHISELDHGYVRDIHDYLKVGDKVRVKLIEIREDGKLRLSRKAFLPPPEPEA
KNGEPAREQASAERSGPPRDHASGRSHGPGHGRGGRSGRGRGPDRGRGGRRR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgcagacaaccattcacgaaatcgaattcgccccggggaagtcactgcgcctg
gagacggggcgtctggccaagcaggccaacggcgctgtggtcgtccgccagggcgacacg
atggtgctctgcacggccgtgctggccgacgaaccccgcgaggggcagagctttttcccg
ctgacggtcgagtaccgcgagaaatttgccgccggtggccgaatcccgggcggcttcatc
aagcgtgagggacgtccgacggataaagaaatcctctcctcgcgcctgatcgaccgggcc
atccggccgctttttccggatggcttcttccacgaagtgcagatcatctgctacgtgatc
tcggccgacgatcggtacgacgccgacgtgctggccggtacgggcgcttcggccgcgctg
ctgctggctggcgcgcccttcgacggaccgatcgccgaggtgcgtgtgggacgcgtcgac
ggccagttcgtggtcaaccccacgctcaaggagctcgagcagagcgacatcaacctggtg
gtggccggcaaggaggacgccatcgtgatggtcgagggcgagatgaaggaagtcagcgag
gaggacatgcttgaggccctcgaggtggcgcatgaggccatccgcaagctctgccggggc
cagctcgaatttgtggcggcgcacggtcgtccggaacccttcccgtaccagacgaccacg
cttccggaggagctggtggcgcgcgtgcgcgaactggccgtgcccaagctggaagcgcac
ctgcgtgcaccctacgacaagcagaccttctacgaaggactggagcagatcggtgaggag
acggtcgcggccctgctgggcacgaccgacgcggaaggcaaccaggtgctggccgaggcc
acgcccgaagggtggacggccgaccagatccgcaaggcggtctcgcaggtgacccgcgag
gtcatgcgccagatgatcctgcgggaaggtcgccggatcgacggccgcagcctggacgag
atccggccgatctggatggaagtgggctatctgccccgcgtgcacggctcggccatcttc
acccgcggcgaaacgcaggtgctggcctccgtgacgctgggcacgtcgaaagacgtgcag
atgatcgaccagatcttcgtccagggcgacaagcggttcttcctgcactacgagtttccg
cccttctgcacgggcgagattcgcttcctgcgtggaccgggacggcgcgagatcggccac
ggctatctggccgagcgggcgctggccgccatgctgccggacgaatcgtcgttcccctac
acgatccgcgtgaacgccgatgtgctggagtcgaacggctcctcgtcgatggccagcgtg
tgcgccggctcgctggcgctcatggacgccggcgtgcccgtcaagaagcacgtggccggc
gtggccatgggcctgatcaaagaaggcgaccaggtggccatcctgaccgacatcctcggc
accgaagaccacctgggcgacatggacttcaaggtggccggcacgcgcgacggcatcacg
gcctgccagatggacatcaaaatcggtgggctgacgcgggagatcatgcagcgcgcgctg
gagcaggcccgtcgcgcccggatgtacatcctggatctgatggagcagaccatcgaagcg
ccgcgtccagagctttcgccatatgcgcctcgcctgacgcagatcacgatcgatccggag
ttcatcggcgccgtgatcggtccgggcggccgcgtggtgcagggcatccagcgcgaaacg
aacaccacgatcgagatcgaggaacgcgacggcgtgggcgtggtcaccgtggcggccacg
aatcaggagaacgcccagcgcgccatcgagatgatcaagcagatcgtggccgtgcccgag
gtgggcgccgagtacgagggcatcgtgcgcagcatccagagcttcggcgccatcgtggag
atcatgcccggcaaagaagggctgctccacatctcggaactggaccacggctacgtgagg
gacatccacgactacctgaaagtcggcgacaaagtccgcgtcaagttgatcgaaatccgc
gaggacggcaaactccgtctcagccgcaaggccttcctgccgccgccggagcccgaagcg
aaaaacggcgagccggcacgcgagcaggcgagcgctgagcggagcgggccgccgcgtgat
cacgcttccggacgctcccatggacccggacacggccgcggaggccggagcggacggggc
cgcggaccggatcgcggacgcggtggacgccgtcgctaa
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