Rhodothermus marinus DSM 4252: Rmar_1386
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Entry
Rmar_1386 CDS
T01119
Name
(GenBank) hypothetical protein
KO
K01729
poly(beta-D-mannuronate) lyase [EC:
4.2.2.3
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00051
Fructose and mannose metabolism
rmr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
Rmar_1386
Enzymes [BR:
rmr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.3 mannuronate-specific alginate lyase
Rmar_1386
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Gene cluster
GFIT
Motif
Pfam:
Chondroitinas_B
NosD
Beta_helix
Por_Secre_tail
Flg_new_2
FlgD_ig
DUF1965
Sialidase-like_CBM
Motif
Other DBs
NCBI-ProteinID:
ACY48275
UniProt:
D0MIG7
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All DBs
Position
complement(1617063..1619963)
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AA seq
966 aa
AA seq
DB search
MADSLRKPLMLLGLSFCLISVVRGQTVVLNTSFEEFAPGSIHQQDDWLVEEGQALISDSS
RFVHSGSQGLFFQASNEKLVVRYIPFAAADSGISGVVYLDVWVRIEQLETKDFAINGYDL
YGGSQKRAFVLEFDTPSGTEGKFQVYDGSSKVVVQNYQLGQWHRISARVDYQRGIYQVIF
DQSEAVTVNFRENYTPSRPDARKEFHELRFNLGYDGAVGTVAAAIDDLYIGTDPIPDVTF
PPTEVYYTIQVEQPAVGRITLDPDQEQYLEGTWVTATLELPEGYINLGWTGDLSGTELVK
EFQVFKDMVIGAEVGIDSLNPPPRYRVEVIQPDTGRITLDPPGGEYYAHTTVTATLELPP
GFINLGWTGDLSGTELEKTFVVLKDMTIGAVVVEDTTPPMVYTVRTAEELKSVLRGELRP
GDIVEVEDGVYDTGGGITIEASGTETKPIIIRAKNIGLAELTGKTYFTFRKSSYIILEGF
KFTSNVYTAVKLEACHHIRITRNIFQLDETGRESSKWIVVGGYYADPSLLSHHNRIDHNI
FRDKQTLGNFITIDGGDVVSQHDRIDHNYFYNIGPRAENEKEAIRVGWSELSLTDGYTVI
EYNLFERCDGDPEIVSIKSSKDTVRYNTFRASQGSLTLRHGNGSVVYGNFFLGEGREGTG
GVRVYAKDHKIYNNYFEGLTGSVWDAAITLTNGDTDEGSLSAHWRVQNVLIAHNTLVNNY
SNIEIGYARSDNSWKKEPRNVQIINNLVVAGELTNRDLITIYTEPTDFVWAGNIMYPKTG
YGLGITADPAEIFVADPLLEENNGLWVLSAQSPAVDAGSSLNFSIMEDFQGQPRDALPDV
GADELSSAPVLRRPLQPEDVGPFASDSISTSVEVRSHRPAQTVLKGFPNPFITSTVLAFS
LPERSQITLFVYDMLGREVARLYDGELEAGSYRLVWQPEDELASGIYLVVLTTDRGTAAY
KLALIR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggctgattcgctacgaaagcccttgatgctgctgggcttatccttttgcctgatctcg
gttgttcgaggacagacggttgtgctgaacacttcctttgaagaatttgcgccggggtct
attcatcagcaggatgactggctggtcgaggaaggacaggcgttgatttctgattcgagc
cgctttgtgcacagtgggagtcagggcttgttctttcaggccagcaacgagaagctggtg
gtacggtacataccttttgcggcggcagatagcggcataagtggggtagtttatctggac
gtgtgggttcgtatagagcagctggaaacgaaagattttgccatcaacgggtacgacctt
tatggagggagtcagaaacgcgcctttgtgctggaattcgacacgccttccgggacggaa
ggaaagtttcaggtgtatgacgggtcttccaaagttgttgtgcagaactaccagttgggg
caatggcatcgcatcagtgcccgtgtggattatcaacgagggatttatcaggtgattttc
gatcagagtgaggcggtaacagtaaacttccgtgagaactatacaccttcgcggcctgat
gcgcggaaggaatttcatgagttgcgttttaatctgggctatgatggggcggtagggacg
gtggcggccgccattgatgatctttatatcggcaccgatcctattcctgacgtcacgttt
ccgcctaccgaggtgtactacaccattcaggttgagcagccagcggtgggaaggattacc
ctggatcctgatcaggagcaatatctcgaggggacctgggtgacggccacgctggagtta
cctgagggctacatcaatctgggctggaccggtgacctttcgggaacggagctggtgaag
gagtttcaggttttcaaagatatggtaatcggggctgaggtaggcattgattcgttaaac
ccgcctcctcgttaccgggtagaggtaattcagccggataccggtcgcattacgctggat
ccaccgggtggcgagtactacgcgcacaccacggtgacggccacgctggagctcccgccg
ggcttcatcaatctgggatggacaggagatctttcgggaacggagctggagaaaaccttt
gtcgtcttgaaggacatgacgatcggtgcggtggtggtggaagataccacgccgccgatg
gtctatacggtacgcaccgccgaggaattgaagtcggtgctgcggggtgaactccggccc
ggggatattgtggaagtggaggacggcgtttacgacacaggtggggggatcaccatcgaa
gccagtggcaccgaaacgaaaccgatcatcatccgggcaaagaacatcgggctggcggag
ttgaccggtaagacgtactttaccttccgaaaaagctcctacatcattctggaaggcttc
aagttcacctccaacgtttacacagcggtcaaactggaagcctgtcatcacatccgtatc
acgcgcaacatctttcagctggatgagacgggacgcgagagtagtaagtggattgtggtc
ggagggtattatgccgatcccagcctgttaagccatcacaaccgaatcgatcacaacatc
ttccgagataaacagaccctgggtaacttcatcacgattgacgggggtgatgttgtatcg
cagcacgatcgcatcgatcacaactatttctacaacattggtcctcgtgcggaaaatgag
aaagaggccattcgggtgggatggagtgaactctctctgaccgatggctacaccgtaatc
gagtacaatctgtttgagcgctgtgatggcgatccggaaattgtgtcgatcaaaagttcg
aaagacacggtccgatacaatacgttccgggcgagccagggctcactgaccctgcgccat
ggcaacggatcggtggtgtatggtaatttcttcctgggcgaaggcagagaaggtaccggc
ggcgttcgcgtttacgcgaaagaccacaagatttacaacaactacttcgaggggttgacc
ggtagcgtctgggatgcagccattacgctcaccaacggtgacaccgacgaggggtccctg
agcgcgcactggcgcgtccagaatgtgctgatcgcgcacaacacgctggtcaacaattac
tccaacatcgaaatcggctacgcgcgttccgacaactcctggaagaaggagccgaggaac
gtgcagatcatcaacaacctggtggtggcgggagagctgaccaacagagatctgatcacg
atttatacggagccgacagattttgtgtgggcgggcaacatcatgtatccgaagacgggg
tatggcctgggcataacggccgaccctgcggaaattttcgtggcagatccgttactggaa
gaaaacaatggtctctgggttctcagtgcgcagagtccggcggttgatgcgggcagcagt
ctcaacttttccatcatggaagatttccagggccagcccagagacgctctgcccgatgtt
ggcgcagatgaactgtcttcagcgcctgttttacgtcggccgttgcagccagaagacgta
gggccgtttgcttcggatagtatcagcacgagcgttgaagtacgaagccatcggcctgca
cagacggtgctgaaaggctttcccaacccgtttatcacttcgaccgtactggctttcagt
ctgcctgagcggtcacagataaccctgtttgtttatgatatgctgggacgtgaggtggcg
cgcctctatgacggggaactggaggccggaagctatcgactggtatggcagcctgaagac
gaactggcatcgggtatatatctggttgtgttgaccacggatcgaggaacagccgcttac
aaacttgccctgatcaggtaa
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