Rhodothermus marinus DSM 4252: Rmar_1708
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Entry
Rmar_1708 CDS
T01119
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00061
Fatty acid biosynthesis
rmr00071
Fatty acid degradation
rmr01100
Metabolic pathways
rmr01212
Fatty acid metabolism
rmr02024
Quorum sensing
rmr04146
Peroxisome
Module
rmr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rmar_1708
00071 Fatty acid degradation
Rmar_1708
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rmar_1708
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rmar_1708
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rmr01004
]
Rmar_1708
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmr04147
]
Rmar_1708
Enzymes [BR:
rmr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rmar_1708
Lipid biosynthesis proteins [BR:
rmr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rmar_1708
Exosome [BR:
rmr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rmar_1708
Exosomal proteins of breast cancer cells
Rmar_1708
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ACY48594
UniProt:
D0MJD6
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All DBs
Position
complement(1981245..1983137)
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AA seq
630 aa
AA seq
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MGERIYTAPPDTGTPVLGKTLPDVLYEALARYENPAFLNQPAGPGRWTPISLRDFAEQAE
ALALGLHAMGLERGAHVAFYMESDAHFCLADMACLIGGLIDVPIYLTHAPESIHYVIEHA
EARALVVSNRALLERVAPLLRDLPGVQFVVVADATGLDTDRVEGRPLYTFAQLLEAGRQR
RAADPEAIARLRAQIRPGDLATIIYTSGTTGRPKGVMLSHENISFNALTSFSGIKQYRPG
PDGEVALSFLPLTHVFARTLFYGYLYYATSVYFTTPDALRDALRQVRPTTFATVPRVLEK
IYGALVERAAAMPGLKGRIFRWALDLARRYELGREPRGLYRLQLAVADRLVYRKWREAMG
GRIAFIIAGGAALSAELANIFAAAGIPILQGYGLTETSPVITYNRPELNRAGTVGVPIPG
VEVKIAEDGEILTRGPHVMLGYYKDPERTREVIDEEGWFHTGDIGYFTEEGFLVITDRKK
DLFKLSTGKYVMPQPLEQRLTADPLVEQALVVGPGYKFTAALIFPDEEALRRLARRLGLD
ANQPLEKLVREPKILEVYQQIVDRANEGMDPWATIKRFVLVPERLSIEEGTLTPTLKVRR
SALYKKYEAQIRALYEGAEAEAQEATTPES
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaacgcatctacacggcgccacccgatacgggcacgccggtgctcggtaagacg
ctgccggacgtgctctacgaggcgctggcgcgctacgagaacccggccttcctgaatcaa
ccggccggaccggggcgctggacgcccatctcgctgcgcgattttgccgagcaggccgaa
gcgctggcgctgggcctgcatgcgatgggactggagcggggcgcccacgtggccttctac
atggaaagcgacgcccacttctgcctggccgacatggcctgcctgatcggtggcctgatc
gacgtgcccatctacctgacgcacgcgcccgagtcgattcattacgtcatcgagcatgcc
gaggcccgggcgctcgtcgtctcgaaccgagcattgctcgaacgcgtcgcgccgctgctg
cgcgacctgcccggcgtgcagttcgtcgtggtggccgacgcgaccgggctggacacggat
cgggtggaagggcggccgctctacaccttcgcccagttgctggaagcagggcggcagcgc
cgggcggccgatccggaggccatcgcgcggctgcgggcgcagatccgtccgggcgacctg
gccaccatcatctacacgagcggcacgacggggcgtcccaagggcgtgatgctctcccac
gagaacatttcgttcaacgcgctcacgtccttcagcgggatcaagcagtaccggccgggg
ccggacggcgaggtggccctgtcgtttctgccgctgacgcacgttttcgcccggacgctc
ttctacggctacctgtactatgccaccagcgtctatttcacgacgcccgacgccctgcgt
gacgcgctccggcaggtgcggcccacgacgttcgccacggtgccgcgcgtgctcgagaag
atctacggggcgctggtggagcgggcggccgccatgcccggcctgaaggggcggatcttt
cgctgggcgctggacctggcccggcgctacgagctggggcgcgagccgcggggactttac
cggctgcaactggccgtggccgaccggctggtctatcgcaaatggcgggaggccatgggc
gggcgcatcgccttcatcattgcgggcggggcggccctttcggccgaactggccaacatc
ttcgcggcggctggcatcccgatcctgcagggctacggcctgaccgagacgagcccggtc
atcacctacaaccgccccgagctgaaccgggccggcacggtgggggtgcccatcccgggc
gtggaggtgaagatcgccgaggacggcgagattctcacgcgcggcccccacgtcatgctg
ggctattacaaagacccggagcgcacacgcgaggtgatcgacgaagaagggtggttccac
acgggcgacatcggctacttcactgaagagggctttctcgttatcaccgaccgcaagaaa
gatctgttcaagctctcgacgggcaagtatgtgatgccccagccgctggagcagcgcctg
acggccgatccgcttgtcgagcaggcgctcgtggtgggacccggttacaagttcacggcg
gcgctcattttcccggatgaggaagcgcttcgacggctggcgcggcggctcgggctcgac
gccaaccagccgctcgaaaagctggtacgcgagccgaagatcctggaggtctatcagcag
atcgtcgatcgcgccaacgaggggatggacccctgggccacgatcaagcgctttgtgctg
gtgcccgagcggctttccatcgaagaaggcacgctgacgcccacgctcaaagtgcggcgc
tcggcgctctacaaaaagtacgaggcccagattcgggcgctctacgagggtgccgaggcc
gaagcacaggaagcgacaactcctgaatcctga
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