Rhodothermus marinus DSM 4252: Rmar_1813
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Entry
Rmar_1813 CDS
T01119
Name
(GenBank) alpha amylase catalytic region
Organism
rmr
Rhodothermus marinus DSM 4252
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
hDGE_amylase
Malt_amylase_C
SusG_C
DUF3459
GHL10
GHL6
Alpha-amylase_C_2
Motif
Other DBs
NCBI-ProteinID:
ACY48697
UniProt:
D0MJN9
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Position
complement(2122668..2124047)
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AA seq
459 aa
AA seq
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MRPLFYLVLSLLIATGCEAPPEQELPHVPPGVGKPEWIADAVLYEIFVPDFSPEGTFQGV
IRRLDSLQALGVNTLWLMPIHPVGKKRAKTDIGPLGSPYAVRDYYAVNPDYGTEEDFRAL
VDSVHARGMHIIIDLVANHTAWDHPWVTEHPDWYTPGPIDGFTYPVLNGDTTDWTDVVDL
NYDNPELRQAMIEVMQYWVREFDIDGYRCDVAHGVPLDFWKAAIDSVEKIKPVLMLAEAA
EPEMHLVGFDLTYAWPFYHQLKEVWRGAPLHTLVRQVDSTLGLLPPGARRLRFTTNHDET
MWDAPPPVLFGGDKGSMAAFVLATSMPGVPLLYNGQELGVRERVSFFARTPYNWEAPESP
ALYAFYRRYLNFYRASEALRHGELTVLNPEADDVLVYLRATEADTLLLIVNVRNRPETVA
LPEGIRGRRWVEVFASDTLAADTLQLGPYNYRIYQPLRP
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgttgttttacctggtgttgagcctgctcattgcgaccggatgcgaggcgccg
cctgagcaggaattgccccatgtaccgcccggggtgggcaagcccgaatggatcgccgat
gcagtgctctacgagatctttgtgcccgacttttcgccggaggggaccttccagggcgtg
atcagacggctggattcgctgcaggcgctgggtgtcaatacgctctggctcatgcccatt
caccccgtcggaaagaagcgggccaagacggacatcgggccgctggggtcgccctatgcc
gtgcgagactactacgcggtcaaccccgactacggtaccgaggaggacttccgtgcgctg
gtcgattcggtgcacgcccgcggcatgcacatcatcatcgatctggtggccaaccatacg
gcctgggaccacccctgggtcacggaacaccctgactggtacacgccggggccgatcgac
ggcttcacctatccggtgcttaacggcgacacgacggactggaccgacgtggtcgatctc
aactacgacaatcccgagctccgccaggcgatgatcgaagtgatgcagtactgggtgcgg
gagttcgacatcgacggctatcggtgcgacgtggcccacggcgtgccgctggacttctgg
aaagcggcgatcgattcggtggaaaagatcaaaccggtgctgatgctggccgaagcggct
gagccggagatgcacctggtcggattcgatctgacctatgcctggcccttctaccatcaa
ctgaaagaggtctggcgcggcgcgccgctgcacacgctggtgcgacaggtggactcgacg
ctcgggctgctgccgccgggtgcacgtcggctgcgctttaccaccaaccacgacgagacg
atgtgggatgcgccgccgccggtactctttggcggcgacaaagggtcgatggcggcgttc
gtgctggccacgtccatgcccggcgtgccgctgctctacaacggacaggagctgggtgtg
cgggagcgggtgtcgtttttcgcccgcacgccctacaactgggaggcgcccgaaagtccg
gcactctatgcgttctaccgacgctacctgaacttttaccgggcgagcgaggcgctgcgc
cacggcgaactgaccgtgctgaatccggaagccgacgacgtgctcgtgtacctgcgggct
accgaggccgatacgttgttactgatcgttaacgttcgcaaccggccggaaacggtcgcc
ctgcccgaaggtatacgcgggcgacgctgggtggaggtctttgcgtccgacacgctggcg
gccgatacgttgcaacttggtccatacaattaccgcatctatcagccattgcggccatga
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