Rhodothermus marinus DSM 4252: Rmar_2001
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Entry
Rmar_2001 CDS
T01119
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rmr
Rhodothermus marinus DSM 4252
Pathway
rmr00220
Arginine biosynthesis
rmr00240
Pyrimidine metabolism
rmr00250
Alanine, aspartate and glutamate metabolism
rmr01100
Metabolic pathways
rmr01110
Biosynthesis of secondary metabolites
rmr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rmr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Rmar_2001
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Rmar_2001
00220 Arginine biosynthesis
Rmar_2001
Enzymes [BR:
rmr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Rmar_2001
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
ATP-grasp
Dala_Dala_lig_C
GARS_A
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Epimerase
DUF4349
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ACY48882
UniProt:
D0MKH0
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All DBs
Position
complement(2332125..2334965)
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AA seq
946 aa
AA seq
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MPKRTDIKRILLIGSGPIVIGQACEFDYSGSQAARALRKEGYEVILVNSNPATIMTDPIT
ADRVYLQELTPESIRRIVEKERPDAVLPTMGGQTALNLAAQLHEEGFWEAMGVEIIGVDI
EAIQITEDRQKFRDLMEQIGIDQARSRTARSLLEAKEILQELGGLPVVIRPSFTLGGTGG
GIVWTMEEFDRKVTRGLELSPVHQVLIEESVYGWKEYELELLRDANDNVIIVCPIENLDP
MGVHTGDSITVAPAQTLTDKQYQRMRDAAIKMMRSIGKFAGGCNVQFAVEPHTGRMIAVE
INPRMSRSSALASKATGYPIAKVAARLAVGYTLDELPNDVTGTTSACFEPSIDYVVVKIP
RWNFEKFEGVDEELTTQMKAVGEVMAIGRTFPEALQKAWQSLENGYAGLGADREDPSREE
VRARLKKPYWDRTLQIRNAFRLGASVEEIHDITYIDPWFLYQIEDIVKIERELERRTLDQ
LDADFLRLVKQYGFSDVQIAYLLQGNVTEEDVRARRKALGITPTFRLVDTCAAEFPAQTP
YYYSTYETENESEVTDREKVIILGAGPNRIGQGIEFDYCCVHGVLAAKEMGYEAIMINCN
PETVSTDFDVADKLYFEPVFWERVLDIIEHENRHGKLKGVIVQLGGQTALKLARKLHEHG
IPILGTSFPMMDLAEERSKFSALLRELEIPYPPYGAARTVAEAVEVAERIGYPILIRPSY
VLGGQGMRIAINKEEVERYVRNILKLLPDNEILLDLFLENGIEVDVDAACDGEEVWIAGI
MQHIEPAGVHSGDSTAVLPPFSLSEEVLNTIRRYTEDIARRLQVVGLINVQMVVKDNVVY
VIEANPRASRTMPFVAKATGVPVAKIGTQLMLGRKLREFREAGLLESKLKGYAIKEPVFS
WDKFPEVPKELGPEMKSTGEAIAFVETLTDEHFRRPYAIRNLYLSR
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcggaccgacatcaagcggatcctgctgatcggatcgggtccaatcgtcatc
gggcaggcctgcgagttcgactactccggcagccaggccgcccgagccttgcgtaaagaa
ggctacgaggtcattctggtcaactcgaacccggccacaatcatgaccgacccgatcacg
gccgatcgggtctatctgcaggagttgacgccggaatccatccgccgcatcgtcgagaaa
gagcgtcccgacgccgtgctgcccacgatgggcgggcagacggcgctgaacctggccgcc
cagctccacgaagagggcttctgggaggcgatgggcgtggagatcatcggcgtggacatc
gaggcgatccagatcacggaggatcgccagaaattccgcgacctgatggagcagatcggc
atcgatcaggcccggagccgcacggcccgtagcctgctggaagccaaagagatcctgcag
gagctgggcgggctgcccgtggtgatccgcccgtcattcacgctgggcggcaccggcggc
ggtatcgtctggacgatggaggagttcgaccgcaaggtgacgcgcgggctggagctttcg
cccgtccaccaggtgctcatcgaggaaagcgtctacggctggaaggaatacgagctggag
ctgctgcgcgacgcgaacgacaacgtgatcatcgtctgtcccatcgaaaacctcgacccg
atgggcgtacacacgggcgactcgatcacagtggcgcccgcgcagacgctcaccgacaaa
cagtaccagcgcatgcgcgacgcggcgatcaagatgatgcgctcgatcggcaagtttgcc
ggcggctgcaacgtgcagtttgccgtcgagccgcacaccgggcgcatgatcgccgtcgag
atcaacccgcgcatgtcgcgctcgtcggcgctggcctcgaaggccacgggttacccgatc
gccaaggtggcagcccgcctggccgtgggttacacgctcgacgaattgcccaacgacgtg
acgggcaccacgagcgcctgtttcgagccgtcgatcgactacgtggtcgtcaagatcccg
cgctggaatttcgaaaagttcgagggcgtcgacgaggagctgaccacgcagatgaaggcg
gtaggcgaggtgatggccatcggccgcaccttccccgaagcgctccagaaggcctggcag
agcctggaaaacggctatgccggcctcggcgccgaccgggaagacccgtcgcgcgaagag
gtgcgcgcccgtctcaagaagccctactgggaccgcacgctgcaaattcgcaacgccttc
cggctgggcgcctcggtcgaggagatccacgacattacctacatcgatccgtggttcctc
taccagatcgaggacatcgtcaaaatcgaacgggagctggagcggcgtacgctcgaccag
ctcgacgccgacttcctgcggctggtcaagcagtacggcttctcggacgtgcagattgcc
tacctgctgcaagggaacgtgaccgaggaggacgtgcgggcgcggcgtaaggcgctgggc
atcacgcccacgttccggctcgtcgacacctgcgccgccgaatttccggcccagacgccc
tactactacagtacctacgagaccgagaacgaaagcgaggtcaccgaccgcgaaaaggtc
atcattctgggtgccggacccaaccgcatcggccagggcatcgagttcgactactgctgc
gtgcacggggtgctggccgccaaggagatgggctacgaggccatcatgatcaactgcaat
ccggagacggtatcgaccgacttcgacgtggccgacaagctctacttcgagcccgtcttc
tgggagcgggtgctcgacatcatcgagcacgaaaaccggcacggcaagcttaaaggggtg
atcgtgcagctcggcggccagacggcgctcaagctggcccgcaagctccatgagcacggc
atcccgatcctgggcacgtccttcccgatgatggacctggccgaggagcggagcaagttc
tcggcgctgctgcgcgagctggagatcccgtatccgccttacggggcggcgcggacggtg
gccgaggccgtcgaggtggccgagcgcatcggctacccgatcctgatccggcccagctac
gtgctcggcggccagggcatgcgcatcgccatcaacaaagaagaagtcgaacgctatgtc
cgcaacatcctcaaactcctgcccgacaacgagatcctgctggacctcttcctggagaac
gggatcgaggtggacgtcgatgccgcctgcgacggcgaggaggtctggattgccggcatc
atgcagcatatcgaaccggccggcgtccactcgggcgactcgacggccgtgttgccgccc
ttctcgctgtcggaggaggtgctgaacacgatccgccgctataccgaggacatcgcccgg
cgcctgcaggtggtgggcctgatcaacgtgcagatggtggtcaaagacaacgtggtctac
gtgatcgaggccaacccgcgggcgtcgcggaccatgcccttcgtggccaaggcgacgggc
gtaccggtggccaagatcggcacgcagctcatgctgggccgcaagctccgggagttccgc
gaggctggcctgctcgaatcgaagctcaagggctacgcgatcaaagagccggtcttctcc
tgggacaaattcccggaggtgcccaaggagctggggccggagatgaagtccaccggcgag
gccatcgccttcgtcgaaacgctcaccgacgaacacttccgccggccctacgccatccgc
aacctctacctgagtcgatag
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